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Protein Alignment Rcd1 and Tex30
DIOPT Version :9
Sequence 1: | NP_001260963.1 |
Gene: | Rcd1 / 36560 |
FlyBaseID: | FBgn0033897 |
Length: | 1131 |
Species: | Drosophila melanogaster |
Sequence 2: | NP_001382563.1 |
Gene: | Tex30 / 301381 |
RGDID: | 1309095 |
Length: | 227 |
Species: | Rattus norvegicus |
Alignment Length: | 162 |
Identity: | 35/162 - (21%) |
Similarity: | 67/162 - (41%) |
Gaps: | 32/162 - (19%) |
- Green bases have known domain annotations that are detailed below.
Fly 399 TNNRIGNQNLDH---VAETIVS---------------ITRVK-----INELRT--ENPSRGIILV 438
|:...|:.||.| :|..:.| :.|:| :|.|:| |....|:.|.
Rat 35 THGASGDMNLPHLMSLASHLASHGFFCLRFTCKGLNIVHRIKAYKAVLNYLKTSGEYKLAGVFLG 99
Fly 439 GFNAGAALALQVA-------LSESVACVVCMGFAYNTIRGPRGTPDDRMLDIKAPILFVIGQNSA 496
|.:.|:..|..|. ..:.|..::|:.:..:..:......|:.:..||.|:|||.|....
Rat 100 GRSMGSRAAASVMCHTELDDADDFVRGLICISYPLHHPKQQHKLRDEDLFRIKDPVLFVSGSADE 164
Fly 497 RTSQEEMEGLRERMQSESSLVVVGSADDALRV 528
...:..:|.:.::||:.|.:..:..|:.::.|
Rat 165 MCEKNLLEKVAQKMQAPSKIHWIEKANHSMAV 196
|
Known Domains:
Indicated by green bases in alignment.
Gene | Sequence | Domain | Region |
External ID | Identity |
Rcd1 | NP_001260963.1 |
None |
Tex30 | NP_001382563.1 |
Abhydrolase |
32..219 |
CDD:419691 |
35/162 (22%) |
Information from Original Tools:
Tool |
Simple Score |
Weighted Score |
Original Tool Information |
BLAST Result |
Score |
Score Type |
Cluster ID |
Compara |
0 | 0.000 |
Not matched by this tool. |
Domainoid |
0 | 0.000 |
Not matched by this tool. |
eggNOG |
1 |
0.900 |
- |
- |
|
E1_COG3571 |
Hieranoid |
0 | 0.000 |
Not matched by this tool. |
Homologene |
0 | 0.000 |
Not matched by this tool. |
Inparanoid |
0 | 0.000 |
Not matched by this tool. |
OMA |
0 | 0.000 |
Not matched by this tool. |
OrthoDB |
0 | 0.000 |
Not matched by this tool. |
OrthoFinder |
0 | 0.000 |
Not matched by this tool. |
OrthoInspector |
0 | 0.000 |
Not matched by this tool. |
orthoMCL |
0 | 0.000 |
Not matched by this tool. |
Panther |
0 | 0.000 |
Not matched by this tool. |
Phylome |
1 |
0.910 |
- |
- |
|
|
SonicParanoid |
0 | 0.000 |
Not matched by this tool. |
SwiftOrtho |
0 | 0.000 |
Not matched by this tool. |
TreeFam |
0 | 0.000 |
Not matched by this tool. |
|
2 | 1.810 |
|
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