Protein Alignment Rcd1 and sumv-2

DIOPT Version :10

• Sequence 1: NP_001260963.1
• Gene: Rcd1 / 36560
• FlyBaseID: FBgn0033897
• Length: 1131
• Species: Drosophila melanogaster
• Sequence 2: NP_001256043.1
• Gene: sumv-2 / 24104625
• WormBaseID: WBGene00018812
• Length: 1145
• Species: Caenorhabditis elegans
• Alignment Length: 739
• Identity: 162/739 - (21%)
• Similarity: 269/739 - (36%)
• Gaps: 195/739 - (26%)

  Fly   102 KSPALVVTSPCTPTES---------SSTISAPSESSFSEKMEHSYMRDTPVRSDVHNGLTPARNI 157
            ::||....||....|.         |....|..::|..|..::|...|..::..:...|..|:..
 Worm   443 ETPAFDEESPIGGDEKRQQKARESISHLFDAEMDASIKEAKKYSVSFDKYIKPKITGALKHAKIK 507

  Fly   158 LVRHPPQC--PSCHTYPPQHEEL--------SEIQQAHV------------PPYDEV-------V 193
            |:....|.  |....|   ||.|        |.::...|            |...|:       :
 Worm   508 LMSRKRQSAEPDDFYY---HELLVDQVSPSNSNVENVDVDVDIEETDDKVDPTEFEISEEGVIGI 569

  Fly   194 AKEAMNECARIAKYV----KNNNS----DEQDWVARVNKFNWTPMQEMVFEKVCSILDQDQLARL 250
            ..||::...:||..:    |::.|    ||....|..:..:.|...:...|.|.:.|..:.....
 Worm   570 RDEAVDMAEQIALVIPRPTKHDGSPMSMDEIQMRAMEHVESRTKCLDGSLEIVLNQLGHEMAPPT 634

  Fly   251 ANDKRQHEPIHRRISSDKSASRFRKLLASVAWESRITQWIHALLMEHLSPSYMASYLEILQTLKT 315
            ...:.|....|...|::..|.:....:|:...|..|| |.|..::|:|....:||||.||:..|.
 Worm   635 RGVEEQGCQWHTVTSANAQALKNLYTIANNCTEDAIT-WTHQFMIENLEVHMLASYLSILKYAKR 698

  Fly   316 KLPTLVDKMLFGRPLNNSQE-----------LLAPVMKKRWEP------NIMPKSRQLTHNAIMV 363
                 ::...||..::::.:           |.:.|.|:..||      |.:|..| :|....::
 Worm   699 -----LNSSRFGYVISSTDQLDPEWTQVTSLLKSFVYKRHTEPGTEVLNNTIPYHR-MTDTVFLL 757

  Fly   364 VLPNMPTTGTVSD----------RMQKWYQALSTITQVVQISLPNTNNRIGNQN----------- 407
            |    |.|.|..|          |:.:|.|:                  ||:|:
 Worm   758 V----PPTLTFGDHQRAPPRHHARIFRWLQS------------------IGHQDSEFISFDEDID 800

  Fly   408 -----LDHVAETIVSITRVKINELRTENPSRGIILVGFNAGAALALQVA-LSESVACVVCMGFAY 466
                 .:::::.||.....|:.:.....|:..::|||:.|...|..:.| |.|.::.::.:||..
 Worm   801 ATCSVAEYLSDVIVERICDKVRQKNKYRPNCNVVLVGYGASTYLIHRAANLVEGISAIISIGFPV 865

  Fly   467 NTIRGPRGTPDDRMLDIKAPILFVIGQNSARTSQEEMEGLRERMQSESSLVVVGSADDALRVPKS 531
            .|..|.|||.||.:|....|.||::|....|.:.|.:..||..|.|.|.|||||.::|.:.||.|
 Worm   866 MTSLGRRGTADDEILLTYCPTLFIVGAEGRRFNNEAITELRTSMISPSGLVVVGHSNDMILVPTS 930

  Fly   532 KRRIEGVTQSMVDYMVVEEIFEFVNRTLSNPPGPRMPTCLMHQQGYQRL-PKQSPHILADGNANK 595
            .....|::|::|..||:|:|.:|:|   ..|         :.||.:..| |.:..::.   :.:.
 Worm   931 MLLRLGISQTVVFRMVLEKILDFLN---LEP---------VRQQEFADLVPIELNNVF---DLDS 980

  Fly   596 AVQQMRKRKMDGGLDDSMGQPSKTKFVPHNRVHKPKPPRLIDPFAVKRKVGRPRTRPLPNVGGSA 660
            |:  ::..|...||                            .||...........|.| ||.|.
 Worm   981 AL--LKSDKALSGL----------------------------AFASSTHSASSSAAPSP-VGASG 1014

  Fly   661 RSVSQKGAPHPD----------------QPKLSGEEP--------NQSIEF--ILDDAQDYGDAQ 699
            |..:..||...|                .|.:||..|        ::.:.|  ::......||..
 Worm  1015 RRATVTGAGSEDIAKRRKESIILSQQIAAPSISGPPPPAPSPRTEDRFLAFQNLVASTITTGDDM 1079

  Fly   700 TTAGGSASLPKVITPGVLGKQLPP 723
            .......:.|:||..|......||
 Worm  1080 PRRASMGASPRVIERGDFRDHRPP 1103

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
Rcd1	NP_001260963.1	DLH	<435..523	CDD:440181	34/88 (39%)
sumv-2	NP_001256043.1	PTZ00449	<22..301	CDD:185628
		BRO1_Alix_like	<460..534	CDD:472700	15/76 (20%)