DRSC/TRiP Functional Genomics Resources

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Protein Alignment Rcd1 and Kansl3

DIOPT Version :9

Sequence 1:NP_001260963.1 Gene:Rcd1 / 36560 FlyBaseID:FBgn0033897 Length:1131 Species:Drosophila melanogaster
Sequence 2:NP_001297442.1 Gene:Kansl3 / 226976 MGIID:1918055 Length:903 Species:Mus musculus


Alignment Length:1002 Identity:268/1002 - (26%)
Similarity:422/1002 - (42%) Gaps:275/1002 - (27%)


- Green bases have known domain annotations that are detailed below.


  Fly   133 MEHSYMRDTPVRSDVHNGLTPARNILVRHPPQCPSCHTYPPQHEE----------LSEIQQAHVP 187
            ::|||.:......|. :...|.|.:.|.           |.:.:|          :..:....||
Mouse    37 LDHSYAKPWSAHPDA-SSARPTRMLFVT-----------PRRQQENTIESDVPIDVETVTATPVP 89

  Fly   188 PYDEVVAKEAMNECARIAKYVKNNNS---DEQDWVARVNKFNWTPMQEMVFEKVCSILDQDQLAR 249
            .||...|:..||||.|...:.:.:..   ..:||...||:..||..|..:|.|:...|..|:|||
Mouse    90 LYDNQKARSVMNECERHVIFARTDADAPPPPEDWEEHVNRTGWTVAQNKLFNKILKALQSDRLAR 154

  Fly   250 LANDKRQHEPIHRRISSDKSASRFRKLLASVAWESRITQWIHALLMEHLSPSYMASYLEILQTLK 314
            |||:...:||:.||::.||.|.|.|:.||||:|::::|||:|..|:|.||...:|:||:.|||||
Mouse   155 LANEGACNEPVLRRVAVDKCARRVRQALASVSWDTKLTQWLHTTLVETLSLPMLAAYLDALQTLK 219

  Fly   315 TKLPTLVDKMLFGRPLNNSQ------ELLAPVMKKRWEPNI----MPKSRQLTHNAIMVVLPNMP 369
            .|:|||:|:||..   :|::      |.|:.::|:.|:|.:    ..|..:|..:.:::::.:.|
Mouse   220 GKIPTLIDRMLVS---SNTKTGAAGAEALSLLLKRPWDPAVGVLSHNKPSKLPGSPLILIVSSGP 281

  Fly   370 TTGT--VSDRMQKWYQALSTITQVVQISLPNTNNRIG---NQNLDHVAETIVSITRVKINELRTE 429
            ::..  .|.|.:.|...||.:.:|:.::....||..|   .|.|:|    ::...|.|:.|:.:.
Mouse   282 SSSVFPASRRHRFWQSQLSCLGKVIPVATHLLNNGSGVGVLQCLEH----MIGAVRSKVLEIHSH 342

  Fly   430 NPSRGIILVGFNAGAALALQVALSESVACVVCMGFAYNTIRGPRGTPDDRMLDIKAPILFVIGQN 494
            .|.:.|||:|:|.||.:|..|::.|.|..|||:||...|:.||||..||.:||:|.|:|||||||
Mouse   343 FPHKPIILIGWNTGALVACHVSVMEYVTAVVCLGFPLLTVDGPRGDVDDPLLDMKTPVLFVIGQN 407

  Fly   495 SARTSQEEMEGLRERMQSESSLVVVGSADDALRVPKSKRRIEGVTQSMVDYMVVEEIFEFVNRTL 559
            |.:...|.||..||::::|:||||||.|||.||:.|:|::.||:||||||..:.:||.:|:...|
Mouse   408 SLQCHPEAMEDFREKIRAENSLVVVGGADDNLRISKAKKKSEGLTQSMVDRCIQDEIVDFLTGVL 472

  Fly   560 --------------------------------------SNP--PGPRMPTCLMHQQGYQRL---- 580
                                                  |.|  |..|:||   ...|.:.|    
Mouse   473 TRAEGHVGSEPRDQDAEKKKKPRDLTRRDLAFEIPERGSRPASPAARLPT---SPSGSEDLSSVS 534

  Fly   581 --PKQSP--HILADGNANKAVQ----QMRKR---KMDGGLDDSMGQPSKTKFVPHNR-VHKPKPP 633
              |..||  .:....:..|:.|    |:.||   :.:..|.....|.....|:..|. |.|..||
Mouse   535 SSPTSSPKTKVTTVTSTQKSSQIGTSQLLKRHVQRTEAVLTHRQAQAQFAAFLKQNMLVRKAFPP 599

  Fly   634 R----LIDPFA------VKRKVGRPRTR------PLPNVGGSARSVSQKGAPHPDQPKLSGEEPN 682
            .    |..|.:      ::::..|.:.:      |||            ||....:||:.....:
Mouse   600 GTSSCLFVPISSESVEDIEKEELRVQLKRHHSSSPLP------------GAKPSKRPKIKVSLIS 652

  Fly   683 QSIEFILDDAQDYGDAQTTAGGSASLPKVITPGVLGKQLPPVNLAAGTKIKMIPSSQFVQIKSLP 747
            |            ||   |.||..:|.:..||...|.:  |:.:..|.      |:...::..|.
Mouse   653 Q------------GD---TVGGPCTLSQGGTPEAAGGK--PITMTLGA------SAGAKELTGLL 694

  Fly   748 SQSKLINYTLNKPSVGTSSTANIGSVVKTLPCSSVSGQQIITLKTPSG-QTQQFATAATSTGAAG 811
            :.:|             ||::..|....|.|..:.|.      .||:. .|.|....|||.|:  
Mouse   695 TTAK-------------SSSSEGGGTASTTPSVASSS------ATPNAIHTLQSRLVATSPGS-- 738

  Fly   812 SSTSTGTGQKKYTVFKNANGMTMLHLTKSVPTTGSSSG---SANMDLSNIIDMPIVFADNEGNIP 873
                                        |:|.|.|:|.   ..:..|.:|       :.....:|
Mouse   739 ----------------------------SLPGTASASSLLQGLSFSLQDI-------SSKTSGLP 768

  Fly   874 EHQQADKDIKPAPIRSANKSPLIISQKIIKEANKPSGMVTSGSITAVSKPGNIVLNKGLQQLLNS 938
            .        .|:|    ..:|...|.|:      |:.|.:.|:||.           |...::.:
Mouse   769 G--------SPSP----GPAPQATSVKL------PTPMQSLGAITT-----------GTSTIVRT 804

  Fly   939 SPGGTLATQNKVVYLNRSTIKPMGNVAPGTHRVPIRIVSTPNTGGAVTTTASSSPIMV---DPAT 1000
            .|..|             |:..:| ..||.....|..:.   |.|::...|||.|.:.   :.|:
Mouse   805 IPVAT-------------TLSSLG-ATPGGKPTAIHQLL---TNGSLAKLASSLPGLAQISNQAS 852

  Fly  1001 GSKVAKTV---------NVQTIKPTGS 1018
            |.||..|:         .:.|:.|.||
Mouse   853 GLKVPTTITLTLRGQPSRITTLSPMGS 879

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Rcd1NP_001260963.1 None
Kansl3NP_001297442.1 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 478..562 13/86 (15%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 626..645 5/30 (17%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 657..678 7/22 (32%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 696..720 7/42 (17%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 761..781 4/31 (13%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 868..903 4/12 (33%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C167837818
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG3571
Hieranoid 1 1.000 - -
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0006481
OrthoInspector 1 1.000 - - oto92214
orthoMCL 1 0.900 - - OOG6_105996
Panther 1 1.100 - - LDO PTHR13136
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R3937
SonicParanoid 1 1.000 - - X5454
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 1 0.960 - -
1110.730

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