DRSC/TRiP Functional Genomics Resources

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Protein Alignment mam and KTF1

DIOPT Version :9

Sequence 1:NP_001286401.1 Gene:mam / 36555 FlyBaseID:FBgn0002643 Length:1594 Species:Drosophila melanogaster
Sequence 2:NP_196049.1 Gene:KTF1 / 830308 AraportID:AT5G04290 Length:1493 Species:Arabidopsis thaliana


Alignment Length:1181 Identity:209/1181 - (17%)
Similarity:348/1181 - (29%) Gaps:301/1181 - (25%)


- Green bases have known domain annotations that are detailed below.


  Fly   351 EPGVGGGGGGGGGGGSGNNNNNGGGGGGGNGNNNNNGGDHHQQQHQQQQQQQGGGL-GGLGNNGR 414
            |.|.|.|.|||.|.|||.....|..||.|.|:::......::..:.....::..|| .|:.:.|.
plant   397 EGGKGEGSGGGKGEGSGGGKGEGSRGGKGEGSSDFKSESSYELYNLVCFSRKDFGLIVGVDDKGD 461

  Fly   415 G--------GGPGGMATGPGGVAGGLGGMGMPPNMMSAQQKSALGNLANLVECKREPDHDFPDLG 471
            |        .||..:..|...:..|..........::.:|.|    :.::|:..:.|        
plant   462 GYKVLKEGIDGPVVVTVGKKEMQNGPFDSKFTALDLNKKQIS----VNDVVKISKGP-------- 514

  Fly   472 SLDKDGGGGQ-FPGFPDLLGDDNSENNDTF------KDLINNLQDFNPSFLDGFDEKPLLDIKTE 529
            |..|.|...| :.|...|..:...||...|      .:.:....:.:.....|||.....|..:.
plant   515 SEGKQGVVRQVYRGIIFLYDESEEENGGYFCCKSQSCEKVKLFTEESNEKTGGFDGTAFEDFVSS 579

  Fly   530 DGIKVEPPNAQDLINSLNVKSEGGLGHGFGGFGLGLDNPGMKMR--------------------- 573
            ....:.|..........|..::|.:|..:        :.|.|:|                     
plant   580 PKSPLSPEKEWQPRERYNSSNQGDIGSTY--------SIGQKLRIRVGPLKGYLCRVIALRYSDV 636

  Fly   574 ------------------------------GGNPGNQGGFPN----GPNGGTG------GAPNAG 598
                                          .|:.|. |.|..    |....||      |..:.|
plant   637 TVKLDSQHKIFTVKSEHLAEVRDRNTVLSTSGDAGT-GSFQPFGMLGTESSTGDWAIGAGTSSEG 700

  Fly   599 GNGGNSGNLMSEHPLAAQTLKQMAEQHQHKNAMGGMGGFPRPPHGMNPQQQQQQQQQQQQQQAQQ 663
            ||....|.....|. :....:.|.:..:.||..||    .:|...::|..............|:.
plant   701 GNWNIGGPSTDSHE-SLNIERNMVQLCREKNPWGG----SKPTSDVSPTVADDNTSAWANAAAEN 760

  Fly   664 QHGQMMGQGQPGRYNDYGGGFPNDFGLGPNGPQQQQQAQQQQPQQQHLPPQFHQQKGPGPGAGMN 728
            :...  ...|||.:|.:|....::.|                           ...|.|..:..|
plant   761 KPAS--ASDQPGGWNPWGKTPASEAG---------------------------TVSGWGDTSASN 796

  Fly   729 VQQNFLDIKQELFYSSQNDFDL----------------------KRLQQQQAMQQQQQQQHHQQQ 771
            |:.:..: ||..  |:.|..||                      |..:..::.|::::....::.
plant   797 VEASSWE-KQGA--STSNVADLGSWGTHGGSSGGNKQDEDSVWGKLCEASESSQKKEESSWGKKG 858

  Fly   772 QQQQQPKMGGVPNFNKQQQQQQVPQQQLQQQQQQQQQQQQQQQQQYSPFSNQ------------- 823
            ....:...|.....:...::..|        ...||.:...:.:..|.:|||             
plant   859 GSDGESSWGNKDGNSSASKKDGV--------SWGQQDKGSDESKGGSAWSNQCGDFGSGKKKDGS 915

  Fly   824 -NPNAAANFLNCPPRGGPNGNQQPGNLAQQQQQPGAGPQQQQQRGNAANGQQNNPNAGPGGNTPN 887
             ..|.:|...|...:|.|:..|.....:..::..||....::..|.:. |::::.|...||::..
plant   916 SGWNKSAEDSNANSKGVPDWGQPNDGSSWGKKGDGAASWGKKDDGGSW-GKKDDGNKDDGGSSWG 979

  Fly   888 APQQQQQQSTTTTLQMK--QTQQLHISQQGGGAHGIQVSAGQHLHLSGDMKSNVSVAAQQGVFFS 950
            .....|:....::.:.|  ..........||.:.|.:...|.......|..|:.......|..:.
plant   980 KKDDGQKDDGGSSWEKKFDGGSSWGKKDDGGSSWGKKDDGGSLWGKKDDGGSSWGKEDDGGSLWG 1044

  Fly   951 QQQAQQQQQQQQPGGTNGPNPQQQQQQPHGGNAGGGV--------GVGVGVGVGNGGPNPGQQQQ 1007
            ::...:....::..|.:....:.......|....||.        |.|.| |...||...|:.|.
plant  1045 KKDDGESSWGKKDDGESSWGKKDDGGSSWGKKDEGGYSEQTFDRGGRGFG-GRRGGGRRGGRDQF 1108

  Fly  1008 QPNQNMSNANVPSDGFSLSQSQSMNFNQQQQQQAAAQQQQVQPNMRQRQTQAQAAAAAAAAAAQA 1072
            ....:..|:..|:.....|...|  :.:|......:.           ..:...|...::...|.
plant  1109 GRGSSFGNSEDPAPWSKPSGGSS--WGKQDGDGGGSS-----------WGKENDAGGGSSWGKQD 1160

  Fly  1073 QAAANASGPNVPLMQQPQVGVGVGVGVGVGVGVGNGGVVGGPGSGGPNNGAMNQMGGPMGGMPGM 1137
            ....::.|       :...|.|.|...|.....|.|...|...|||..:....|.|   ||..|.
plant  1161 NGVGSSWG-------KQNDGSGGGSSWGKQNDAGGGSSWGKQDSGGDGSSWGKQDG---GGDSGS 1215

  Fly  1138 QMGGPMNPMQMNPNAAGPTAQQMMMGSGA-------GGPGQVPGPGQGPNPNQAKFLQQQQMMRA 1195
            ..|     .|.|.:......:|...|.|:       ||.|...|...|...:.:.:.:|.:....
plant  1216 AWG-----KQNNTSGGSSWGKQSDAGGGSSWGKQDGGGGGSSWGKQDGGGGSGSAWGKQNETSNG 1275

  Fly  1196 QAMQQQQQHMSGARPPPPEYNATKAQLMQAQMMQQTVGGGG-----VGVGGVGVGVGVGGVGGAN 1255
            .:..:|.....|                 :...:|..||||     ...||.|...|..|.||: 
plant  1276 SSWGKQNDSGGG-----------------SSWGKQDGGGGGSSWGKQNDGGGGSSWGKQGDGGS- 1322

  Fly  1256 GGRFPNSAAQAAAMRRMTQQPIPPSGPMMRPQHAMYMQQHGGAGGGPRTGMGVPYGGGAGGPMGG 1320
                                         :|     ..:|.|.|    .|.|...||  ||..||
plant  1323 -----------------------------KP-----WNEHSGGG----RGFGERRGG--GGFRGG 1347

  Fly  1321 PQQQQRPPNVQVTPDGMPMGSQQEWRHMMMTQQQTQMGFGGPGPGGPMRQGPGGFNGGNFMPNG- 1384
            ..|..|...   :.||   |....|:    |..|..........|...::| .|.:..|..|:| 
plant  1348 RNQSGRGGR---SFDG---GRSSSWK----TDNQENTWKSDQSGGSDWKKG-WGEDSNNSKPSGS 1401

  Fly  1385 APNGAAGSGPN 1395
            :..|.||:.|:
plant  1402 SAGGCAGNWPS 1412

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
mamNP_001286401.1 MamL-1 127..183 CDD:286652
KTF1NP_196049.1 NGN_Euk 147..232 CDD:193577
KOW_Spt5_1 243..280 CDD:240505
SPT5 <435..907 CDD:227493 80/537 (15%)
KOW_Spt5_4 506..547 CDD:240508 11/48 (23%)
KOW 610..656 CDD:294253 3/45 (7%)
MSP1a 795..>886 CDD:288513 12/101 (12%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
00.000

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