DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment mam and maml3

DIOPT Version :9

Sequence 1:NP_001286401.1 Gene:mam / 36555 FlyBaseID:FBgn0002643 Length:1594 Species:Drosophila melanogaster
Sequence 2:XP_005160069.1 Gene:maml3 / 101886283 ZFINID:ZDB-GENE-090313-292 Length:1099 Species:Danio rerio


Alignment Length:1540 Identity:349/1540 - (22%)
Similarity:463/1540 - (30%) Gaps:622/1540 - (40%)


- Green bases have known domain annotations that are detailed below.


  Fly    85 HSPYNANLGATGGIAGITGGNGAGGPTNPGAVPTAPGDTMPTKRMPVVDRLRRRMENYRRRQTDC 149
            :|..|.|.......:|.|||         |.:|         |...||:|||:|:|..||...:|
Zfish    21 NSNVNLNSAINAANSGSTGG---------GNIP---------KHSTVVERLRQRIEGCRRHHVNC 67

  Fly   150 VPRYEQAFNTVCEQQNQETTVLQKRFLESKNKRAAKKTDKKLPDPSQQHQQQQHQQQQQHQQHQQ 214
            ..||:||.....|...:||..|.:|.||.:    |||::         :.:||.:||:.......
Zfish    68 ESRYQQAHAEQLELDRRETVSLYQRSLEQR----AKKSN---------NSKQQSKQQEPDSSASA 119

  Fly   215 HQQAQTMLAGQLQSSVHVQQKFLKRPAEDVDNGPDSFEPPHKLPNNNNNSNSNNNNGNANANNGG 279
            .|:..|::|.|                |.|....||...|              .||:.|..:.|
Zfish   120 EQRNSTLIALQ----------------ETVKRKLDSARSP--------------LNGDQNGLSDG 154

  Fly   280 NGSNTGNNTNNNGNSTNNNGGSNNNGSENLTKFSVEIVQQLEFTTSAANSQPQQISTNVTVKALT 344
            :.|.|.......|.:          |.::|                  .|.|       .:..|.
Zfish   155 SYSPTTKRLRKEGCT----------GMDSL------------------GSLP-------PISPLH 184

  Fly   345 NTSVKSEPGVGGGGGGGGGGGSGNNNNNGGGGGGGNGNNNNNGGDHHQQQHQQQQQQQGGGLGGL 409
            ...:|  |.:          .||||:     ....||..|.|.|.:|.....:.          |
Zfish   185 QMDIK--PTL----------PSGNNS-----ASSNNGTGNGNAGTNHITGRPED----------L 222

  Fly   410 GNNGRGGGPGGMATGPGGVAGGLGGMGMPPNMMSAQQKSALGNL------ANLVECKREPDHDFP 468
            |.||                      |||...::       |:|      :.|.:.|:||     
Zfish   223 GKNG----------------------GMPDIKLN-------GSLDLDDGFSLLKDLKQEP----- 253

  Fly   469 DLGSLDKDGGG---------GQFPGFPDLLGDDNSENNDTFKDLINNL------QDFNPSFLDGF 518
                || ||.|         .|...|.|:     :.|:..:::||:.|      .|.:..|.:.|
Zfish   254 ----LD-DGAGIESSETSLSNQNKLFSDI-----NLNDQEWQELIDELANTVPEDDMHDLFNEDF 308

  Fly   519 DEKPLL--------------------DIKTEDGIKVEPPNAQDLINSLNVKSEGGLGHGFGGFGL 563
            :||..:                    .:.|......:|.:.|..:.|..|:.... |..|.....
Zfish   309 EEKKEVSDFTRVTTEQTQLAQDPAPNSVATAPNSAPQPQSGQMPMGSPQVRPSSS-GPPFATAAS 372

  Fly   564 GL-------DNPGMKMRGGNPGN--------------QGGFPN-----------GPNGGT---GG 593
            |.       .:|.:.|..|:|.|              |...|.           ||.|.|   ||
Zfish   373 GTPPQQPLQQSPAVGMPSGSPANCVARSPQTPTQAQTQASRPGNGFMMNAGPAVGPVGSTPVAGG 437

  Fly   594 APNAGGNGGNSGNLMSEHPLAAQTLKQMAEQHQHKNAMGGMGGFPRPPHG-MNPQQQQQQQQQQQ 657
            .|.:||.||                                ||.|.||.. ::|.:|.:|...||
Zfish   438 GPGSGGTGG--------------------------------GGVPVPPTSELSPAEQLKQMAAQQ 470

  Fly   658 QQQA---QQQHGQMMGQGQPGRY-------NDYGGGFPNDFGLGPNGPQQQQQAQQQQPQQQHLP 712
            ||:|   ||:|.|   |.|...:       :.|.|.|..|   .||.|....||           
Zfish   471 QQRAKLIQQKHQQ---QSQAANWSPAGAPTSPYSGPFNPD---KPNSPMMYTQA----------- 518

  Fly   713 PQFHQQKGPGPGAGMNVQQNFLDIKQELFYSSQNDFDLKRLQQQQAMQQQQQQQHHQQQQQQQQP 777
              |:.....||.|                                                    
Zfish   519 --FNPSNTMGPKA---------------------------------------------------- 529

  Fly   778 KMGGVPNFNKQQQQQQVPQQQLQQQQQQQQQQQ------QQQQQQYSPFSNQNP---NAAANFLN 833
                 |:.|     ..:||..:....|||||||      |....:...|||..|   .:..:.:|
Zfish   530 -----PSIN-----NYLPQNHINMLNQQQQQQQPNNLAAQNSHNKQLSFSNTKPLTHFSGVDHMN 584

  Fly   834 ---CPPRGGPNGNQQPGNLAQQQQQPGAGPQQQQQRGNAANGQQNNPNAGPGGNTPNAPQQQQQQ 895
               .||            :|.|.:    .|.....:||||.          ||..|.||.....|
Zfish   585 QRMTPP------------MANQAK----NPMMPYMQGNAAQ----------GGGPPQAPGPMPSQ 623

  Fly   896 STTTTLQMKQTQQLHISQQGGGAHGIQVSAGQHLHLSGDMKSNVSVAAQQGVFFSQQQAQQQQQQ 960
              |..|..:|.:.:.:.|:                    |.|       ||:.:...|...|:..
Zfish   624 --TAHLSEEQKKMMILKQK--------------------MMS-------QGLPYGPMQPHVQEVV 659

  Fly   961 QQPGGTNGPNPQQQQQQPHGGNAGGGVGVGVGVGVGNGG--PNPGQQQQQPNQNMSNANVPSDGF 1023
            ..|....|..|      ||||  .|||......|.|.||  |||.||||........|.......
Zfish   660 GLPRQAGGVQP------PHGG--PGGVAPAGPNGAGPGGYLPNPQQQQQAAMMKQMMAMEQEKRV 716

  Fly  1024 SL---SQSQSMNF-----NQQQQQQAAAQQQQVQPNMRQRQTQAQA---AAAAAAAAAQAQAAAN 1077
            .|   .|.|....     .|||||...|:|.|.|.::.::.||||.   ........:|..||.|
Zfish   717 QLHLMEQQQKAQLMREQRQQQQQQHMLAEQLQQQQHLPRQMTQAQRNPYPLQQFQGTSQEMAARN 781

  Fly  1078 ASGPNV---PLMQQPQVGVGVGVGVGVGVGVGNGGVVGGPGSGGPNNGAMNQMGGPMGGMPGMQM 1139
            .:..|:   .||||.|                                   |..      |||  
Zfish   782 QTLQNMRTARLMQQQQ-----------------------------------QQN------PGM-- 803

  Fly  1140 GGPMNPMQMNP--NAAG-PTAQQMMMGSGAGGPGQVPGPGQGPNPNQAKFLQQQQMMRAQAMQQQ 1201
                  |||.|  |||. ||...|.|..| |..|...|..||.|||..:.||          |||
Zfish   804 ------MQMTPVQNAAAMPTQGDMSMAYG-GQAGAQTGMYQGMNPNMGQMLQ----------QQQ 851

  Fly  1202 QQHMSGARPPPPEYNATKAQLMQAQMMQQTVGGGGVGVGGVGVGVGVGGVGGANGGRFPNSAAQA 1266
            |.|.:.|               ...|.|:..|.||.|:.|.|.|.|.|.....|    ||.:.| 
Zfish   852 QHHPNQA---------------SMAMAQRQAGAGGQGMVGGGAGAGYGQAMLMN----PNLSQQ- 896

  Fly  1267 AAMRRMTQQPIPPSGPMMRPQHAMYMQQHGGAGGGPRTGMGVPYGGGAGGPMGGPQQQQ------ 1325
                ::....:.|.|..|.......:|...|.||                 ...|||||      
Zfish   897 ----QLKSAGVAPGGQPMAKAQVQRLQSMMGGGG-----------------QAWPQQQQNMQAMA 940

  Fly  1326 -RPPNVQVTPDGMPMGSQQEWRHMMMTQQQTQMGFGGPGPGGPMRQGPGGFNGGNFMPN------ 1383
             |..|..|..:..|..:.|..:...|.:|......||.....|....|... ||..||:      
Zfish   941 GRTSNDMVAFNSNPAYAMQGGQPPRMAKQHFAQAMGGQTMVDPRSINPAAM-GGPMMPHMAGQPR 1004

  Fly  1384 --------------GAPNGAA-GSGPNAGGMM-----SGPNVPQMQLTPAQMQQQLMRQQQQQQQ 1428
                          |.||.|| |.|| |.||.     .||.:|..|           .|..|:..
Zfish  1005 TNQPRGMVMPGMNQGVPNMAAFGQGP-AQGMPGASGGGGPYMPGGQ-----------PQGYQRTS 1057

  Fly  1429 QQQQHMGPGAANNMQMQQLLQQQQSGGGGNMMASQMQMTSMHMTQ 1473
            .|:...|.|:             |||.|..:.......|.:..|:
Zfish  1058 NQELAYGYGS-------------QSGAGAGVSFGLSDGTDLDSTE 1089

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
mamNP_001286401.1 MamL-1 127..183 CDD:286652 22/55 (40%)
maml3XP_005160069.1 MamL-1 44..101 CDD:286652 25/69 (36%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 1 1.000 - -
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 133 1.000 Inparanoid score I4577
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
22.050

Return to query results.
Submit another query.