Sequence 1: | XP_038955104.1 | Gene: | Tspear / 365546 | RGDID: | 1563108 | Length: | 622 | Species: | Rattus norvegicus |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | NP_001097246.3 | Gene: | clos / 5740204 | FlyBaseID: | FBgn0261016 | Length: | 1836 | Species: | Drosophila melanogaster |
Alignment Length: | 429 | Identity: | 95/429 - (22%) |
---|---|---|---|
Similarity: | 162/429 - (37%) | Gaps: | 143/429 - (33%) |
- Green bases have known domain annotations that are detailed below.
Rat 281 LGIEVFNIPGVGLFAAAANRKARS----AIYKWSDGKFVSYQ---NIATHQAQSWRHFTIGKKIF 338
Rat 339 LAVA-NF-GPNERGQEFSVIYKWSP----RKLKF------------------TL----------- 368
Rat 369 --------YQRI-ATH--SARDWEAFEVDGEHFLVVANHREGDNHN-IDSVVYRWNPSSQLFEAN 421
Rat 422 QSIATSGAYDWEFFT-----VGPYSFLVVANTFNGTSTQV---HSHLYIWLVGAFQLFQSFLTFG 478
Rat 479 AAD--WEVFH-IGERIFLAVANSHSYDVQMQAQNDTYILSSVIYELNVTAQTFVKFQDIPTCSAL 540
Rat 541 DWEF---------------------FSVGEDHFLVVAN-SFDGNTFSVNSIIYRWQGYEGFVAVH 583
Rat 584 KLPTFGCRDWEAFNTTAGSYLIYSSAKEPLSRVLKLRTD 622 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
Tspear | XP_038955104.1 | LamG | <23..175 | CDD:419873 | |
EPTP | 313..358 | CDD:397689 | 11/49 (22%) | ||
EPTP | 365..410 | CDD:397689 | 16/85 (19%) | ||
EPTP | 418..454 | CDD:397689 | 13/40 (33%) | ||
EPTP | 468..520 | CDD:397689 | 15/54 (28%) | ||
EPTP | 528..572 | CDD:397689 | 9/65 (14%) | ||
clos | NP_001097246.3 | EPTP | 263..315 | CDD:281697 | 14/51 (27%) |
Blue background indicates that the domain is not in the aligned region. |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 1 | 0.930 | - | - | C166352850 | |
Domainoid | 0 | 0.000 | Not matched by this tool. | |||
eggNOG | 0 | 0.000 | Not matched by this tool. | |||
Hieranoid | 0 | 0.000 | Not matched by this tool. | |||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
OMA | 0 | 0.000 | Not matched by this tool. | |||
OrthoDB | 0 | 0.000 | Not matched by this tool. | |||
OrthoFinder | 0 | 0.000 | Not matched by this tool. | |||
OrthoInspector | 1 | 1.000 | - | - | oto97671 | |
orthoMCL | 0 | 0.000 | Not matched by this tool. | |||
Panther | 1 | 1.100 | - | - | LDO | PTHR15261 |
Phylome | 1 | 0.910 | - | - | ||
SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
SwiftOrtho | 0 | 0.000 | Not matched by this tool. | |||
TreeFam | 0 | 0.000 | Not matched by this tool. | |||
4 | 3.940 |