DRSC/TRiP Functional Genomics Resources

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Protein Alignment Ctf4 and CFAP43

DIOPT Version :9

Sequence 1:NP_610921.1 Gene:Ctf4 / 36551 FlyBaseID:FBgn0033890 Length:895 Species:Drosophila melanogaster
Sequence 2:NP_079421.5 Gene:CFAP43 / 80217 HGNCID:26684 Length:1665 Species:Homo sapiens


Alignment Length:815 Identity:138/815 - (16%)
Similarity:264/815 - (32%) Gaps:261/815 - (32%)


- Green bases have known domain annotations that are detailed below.


  Fly    19 LLYTPRGEFIITCGTDGDIRHWTCISDDDPRSSCLGEFV--------MCIAHTGTRLLASTDRNT 75
            |:|...|  ::..|.||.:  ::.|..|  ||..:.:|:        |..:...|.||..||:.:
Human   309 LVYQKEG--VLASGIDGFV--YSFIIKD--RSYMIEDFLEIERPVEHMTFSPNYTVLLIQTDKGS 367

  Fly    76 IHAYTFPEMDSDGILMRFTAPATCLKVSGGYTAAGSEDTTIKVLKGDTAGNETVLEGHTGPILAL 140
            ::.|||                            |.|.|..|           ||:...|...|:
Human   368 VYIYTF----------------------------GKEPTLNK-----------VLDACDGKFQAI 393

  Fly   141 DLFAE-RKLLVSVAGDGQLKVWNFEEG--------KELKTI-----GGLPKVNSFESASLYGTPH 191
            |.... .:..:::...|::.||..|:.        ..|.|:     ..|......|..|:|....
Human   394 DFITPGTQYFMTLTYSGEICVWWLEDCACVSKIYLNTLATVLACCPSSLSAAVGTEDGSVYFISV 458

  Fly   192 FEPQSGELLAYAVDNEIVVLNTANWEVAFKLRDDSVSSNYSCCQFSPNGERLAAGTTKGEVSIFD 256
            ::.:|.:::..|..:|..|.:..                     :...|..|..||.:|:|.|. 
Human   459 YDKESPQVVHKAFLSESSVQHVV---------------------YDQQGIFLLVGTAEGKVFII- 501

  Fly   257 VKKRKAVTVEIPPSDCNAITCLAWNLSGEVEVAFCDATGQLGTVFLGDAVDTGNGDGLVDDQAEL 321
                            ||.:..::.:.|..|||  ....|:.||.|           |..|..|:
Human   502 ----------------NANSSSSFQIIGFTEVA--KDILQISTVSL-----------LETDIVEV 537

  Fly   322 LGDDYEFEAGDDVDTAADDGDGVSLEQLKRKVMNFADPVDHDDASNQSLDSSSRTVPAPVAPQIK 386
            :......|||                  :.::..|..|......|....|...|.....:...  
Human   538 MVLSSLPEAG------------------RSRLEMFTLPTLLPQVSTTFADERGRLKDEIIHKY-- 582

  Fly   387 LFKQQTAFQPSATPADLEHRYMAWNDVGIVTAHVEPSGDSSIDVEFHDASIHHALHI-SNYNQHN 450
            |::.:.|...:.........|...:.|..:.:::.|..:            |..::| ..|.:..
Human   583 LYELEHALSSAVLGFQSNQIYGFCSQVPYICSYLLPEEE------------HTGIYILKPYKKVQ 635

  Fly   451 LASVSSGALALASNESSKLVVIALAAAGNKEWSLSLPDCESAEAVVATRFLVAVATSSSFLRIFT 515
            ......|.|.|:|:   .|.:|.:|..|    .|.:.|..:.|.....|       |.|    ..
Human   636 SRQYGPGLLYLSSH---GLWLITIAKCG----ILCIRDVYTLETFAWCR-------SHS----HQ 682

  Fly   516 VMGTQREVLTIPGPMVAIAGHEHSLMVV-----YHSSAPSQTQQHLAAMLVNINGLSLRQEYLPV 575
            ..|.|...:::.|..:.:.|.:...:|.     :.....|:...:...:|::::....::.:   
Human   683 GHGIQSMRISMDGQNILVNGRDDGTLVYLKWKRFGGHLASEILDYYQKLLISLSSAMDKENH--- 744

  Fly   576 PLTPGRQLTWFGYSDTGSPSIADNMGLLQLYRRSSNAWFPICDTMKQSTSVSHNFFVVAVSEKRQ 640
                        |..| :|.::.::|....:.:           .|.||.:|.:..|: ...|::
Human   745 ------------YLST-TPKVSVDLGSDSEHTK-----------QKASTDLSQDELVL-TDVKKE 784

  Fly   641 IVQAVLCRGTSYPMTNPRPMLQELRMQIPLCDVEV---EKSELED---ALLRSSLMQMDGAEKM- 698
            |                 |.:|:...:....:|.:   ::.|::.   :|.::.|..|:..:|: 
Human   785 I-----------------PWIQQKSQEAIKKEVNLFSKKRKEIKQGIKSLSKTILNMMEENDKLE 832

  Fly   699 ------QKETAIKLFAL-ACSSECETRARELIESIACTDLLQLAVKYATK------------RGR 744
                  |:|..:.|..| ....|.:....::|:.:   ::..||..|..:            :||
Human   833 NIAKLDQQEFGLDLEELERLHDESQEEVAKMIKDV---EMHNLAKSYLAELIKEECWNSMAVKGR 894

  Fly   745 ----IH---------LSDRLCELLPQLEAVQEARK 766
                .|         :..|..|.|.:||.|.:.:|
Human   895 ALKCFHIPCVVENFPMKARTVEELKELERVLQQKK 929

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Ctf4NP_610921.1 WD40 1..>304 CDD:225201 60/306 (20%)
WD40 12..256 CDD:295369 50/258 (19%)
WD40 repeat 16..52 CDD:293791 10/32 (31%)
WD40 repeat 97..131 CDD:293791 5/33 (15%)
WD40 repeat 138..173 CDD:293791 8/48 (17%)
WD40 repeat 181..223 CDD:293791 7/41 (17%)
WD40 repeat 231..268 CDD:293791 7/36 (19%)
Mcl1_mid 393..670 CDD:289138 41/282 (15%)
CFAP43NP_079421.5 WD40 102..506 CDD:225201 52/279 (19%)
WD 1. /evidence=ECO:0000255 108..149
WD 2. /evidence=ECO:0000255 152..191
WD 3. /evidence=ECO:0000255 250..290
WD 4. /evidence=ECO:0000255 299..338 10/34 (29%)
WD40 repeat 305..342 CDD:293791 11/38 (29%)
WD 5. /evidence=ECO:0000255 342..381 12/66 (18%)
WD40 <344..453 CDD:295369 26/147 (18%)
WD40 repeat 348..385 CDD:293791 15/75 (20%)
WD 6. /evidence=ECO:0000255 385..425 7/39 (18%)
WD40 repeat 390..427 CDD:293791 6/36 (17%)
WD 7. /evidence=ECO:0000255 427..469 7/41 (17%)
WD40 repeat 435..470 CDD:293791 5/34 (15%)
WD 8. /evidence=ECO:0000255 472..511 11/76 (14%)
WD40 repeat 477..512 CDD:293791 10/72 (14%)
WD 9. /evidence=ECO:0000255 680..721 6/44 (14%)
SMC_N 910..>1655 CDD:280601 7/20 (35%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D155530at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
User_Submission 00.000 Not matched by this tool.
11.010

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