Sequence 1: | NP_610921.1 | Gene: | Ctf4 / 36551 | FlyBaseID: | FBgn0033890 | Length: | 895 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | NP_079421.5 | Gene: | CFAP43 / 80217 | HGNCID: | 26684 | Length: | 1665 | Species: | Homo sapiens |
Alignment Length: | 815 | Identity: | 138/815 - (16%) |
---|---|---|---|
Similarity: | 264/815 - (32%) | Gaps: | 261/815 - (32%) |
- Green bases have known domain annotations that are detailed below.
Fly 19 LLYTPRGEFIITCGTDGDIRHWTCISDDDPRSSCLGEFV--------MCIAHTGTRLLASTDRNT 75
Fly 76 IHAYTFPEMDSDGILMRFTAPATCLKVSGGYTAAGSEDTTIKVLKGDTAGNETVLEGHTGPILAL 140
Fly 141 DLFAE-RKLLVSVAGDGQLKVWNFEEG--------KELKTI-----GGLPKVNSFESASLYGTPH 191
Fly 192 FEPQSGELLAYAVDNEIVVLNTANWEVAFKLRDDSVSSNYSCCQFSPNGERLAAGTTKGEVSIFD 256
Fly 257 VKKRKAVTVEIPPSDCNAITCLAWNLSGEVEVAFCDATGQLGTVFLGDAVDTGNGDGLVDDQAEL 321
Fly 322 LGDDYEFEAGDDVDTAADDGDGVSLEQLKRKVMNFADPVDHDDASNQSLDSSSRTVPAPVAPQIK 386
Fly 387 LFKQQTAFQPSATPADLEHRYMAWNDVGIVTAHVEPSGDSSIDVEFHDASIHHALHI-SNYNQHN 450
Fly 451 LASVSSGALALASNESSKLVVIALAAAGNKEWSLSLPDCESAEAVVATRFLVAVATSSSFLRIFT 515
Fly 516 VMGTQREVLTIPGPMVAIAGHEHSLMVV-----YHSSAPSQTQQHLAAMLVNINGLSLRQEYLPV 575
Fly 576 PLTPGRQLTWFGYSDTGSPSIADNMGLLQLYRRSSNAWFPICDTMKQSTSVSHNFFVVAVSEKRQ 640
Fly 641 IVQAVLCRGTSYPMTNPRPMLQELRMQIPLCDVEV---EKSELED---ALLRSSLMQMDGAEKM- 698
Fly 699 ------QKETAIKLFAL-ACSSECETRARELIESIACTDLLQLAVKYATK------------RGR 744
Fly 745 ----IH---------LSDRLCELLPQLEAVQEARK 766 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
Ctf4 | NP_610921.1 | WD40 | 1..>304 | CDD:225201 | 60/306 (20%) |
WD40 | 12..256 | CDD:295369 | 50/258 (19%) | ||
WD40 repeat | 16..52 | CDD:293791 | 10/32 (31%) | ||
WD40 repeat | 97..131 | CDD:293791 | 5/33 (15%) | ||
WD40 repeat | 138..173 | CDD:293791 | 8/48 (17%) | ||
WD40 repeat | 181..223 | CDD:293791 | 7/41 (17%) | ||
WD40 repeat | 231..268 | CDD:293791 | 7/36 (19%) | ||
Mcl1_mid | 393..670 | CDD:289138 | 41/282 (15%) | ||
CFAP43 | NP_079421.5 | WD40 | 102..506 | CDD:225201 | 52/279 (19%) |
WD 1. /evidence=ECO:0000255 | 108..149 | ||||
WD 2. /evidence=ECO:0000255 | 152..191 | ||||
WD 3. /evidence=ECO:0000255 | 250..290 | ||||
WD 4. /evidence=ECO:0000255 | 299..338 | 10/34 (29%) | |||
WD40 repeat | 305..342 | CDD:293791 | 11/38 (29%) | ||
WD 5. /evidence=ECO:0000255 | 342..381 | 12/66 (18%) | |||
WD40 | <344..453 | CDD:295369 | 26/147 (18%) | ||
WD40 repeat | 348..385 | CDD:293791 | 15/75 (20%) | ||
WD 6. /evidence=ECO:0000255 | 385..425 | 7/39 (18%) | |||
WD40 repeat | 390..427 | CDD:293791 | 6/36 (17%) | ||
WD 7. /evidence=ECO:0000255 | 427..469 | 7/41 (17%) | |||
WD40 repeat | 435..470 | CDD:293791 | 5/34 (15%) | ||
WD 8. /evidence=ECO:0000255 | 472..511 | 11/76 (14%) | |||
WD40 repeat | 477..512 | CDD:293791 | 10/72 (14%) | ||
WD 9. /evidence=ECO:0000255 | 680..721 | 6/44 (14%) | |||
SMC_N | 910..>1655 | CDD:280601 | 7/20 (35%) | ||
Blue background indicates that the domain is not in the aligned region. |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 0 | 0.000 | Not matched by this tool. | |||
Domainoid | 0 | 0.000 | Not matched by this tool. | |||
eggNOG | 0 | 0.000 | Not matched by this tool. | |||
Hieranoid | 0 | 0.000 | Not matched by this tool. | |||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
Isobase | 0 | 0.000 | Not matched by this tool. | |||
OMA | 0 | 0.000 | Not matched by this tool. | |||
OrthoDB | 1 | 1.010 | - | - | D155530at2759 | |
OrthoFinder | 0 | 0.000 | Not matched by this tool. | |||
OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
orthoMCL | 0 | 0.000 | Not matched by this tool. | |||
Panther | 0 | 0.000 | Not matched by this tool. | |||
Phylome | 0 | 0.000 | Not matched by this tool. | |||
RoundUp | 0 | 0.000 | Not matched by this tool. | |||
SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
SwiftOrtho | 0 | 0.000 | Not matched by this tool. | |||
TreeFam | 0 | 0.000 | Not matched by this tool. | |||
User_Submission | 0 | 0.000 | Not matched by this tool. | |||
1 | 1.010 |