DRSC/TRiP Functional Genomics Resources

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Protein Alignment Ctf4 and mcl1

DIOPT Version :10

Sequence 1:NP_610921.1 Gene:Ctf4 / 36551 FlyBaseID:FBgn0033890 Length:895 Species:Drosophila melanogaster
Sequence 2:NP_594128.1 Gene:mcl1 / 2543387 PomBaseID:SPAPB1E7.02C Length:815 Species:Schizosaccharomyces pombe


Alignment Length:854 Identity:200/854 - (23%)
Similarity:346/854 - (40%) Gaps:157/854 - (18%)


- Green bases have known domain annotations that are detailed below.


  Fly     9 RYAHTNGYTGLLYTPRGEFIITCGTDGDIRHWTCISDDDPRS----------SCLGEFVMCIAHT 63
            |||||:|.|.|.||..|:|::|.|::..||.:...||::|.|          ..:.|...|    
pombe     9 RYAHTDGLTRLAYTRDGKFLLTVGSNQVIRKFQVGSDEEPDSIDNHQDPITGIAVAENYFC---- 69

  Fly    64 GTRLLASTDRNTIHAYTFPEMDSDGILMRFTAPA--TCLKVSGGYTAAGSEDTTIKV-------- 118
                 ..::..|:..|.........:|.|.|.|.  ....|.|.:.|..|::|.:||        
pombe    70 -----TCSEDATVCVYPIDSPTEHTLLARTTLPIRDVAYSVDGNWIAIASDETAVKVVSSTDSSQ 129

  Fly   119 ---LKGDTAGNETVLEGHTGPILALDLFAERKLLVSVAGDGQLKVWNFEEGKELKTIGGLPKVNS 180
               |:...|.|:.|.....|..||:.           :.:|.|..::.:..:.:|.:..  .:.|
pombe   130 IFSLRPAKASNKHVTYSPNGNFLAVS-----------SCNGILYFYDTQTRELIKFLTN--TIAS 181

  Fly   181 FESAS-LYGTPHFEPQSGELLAYAVDNEIVVLNTANWEVAFKLRDDSVSSNYSCCQFSPNGERLA 244
            .|:.| :.....:.|::|.....:.|:.:.|::..:|...:||......|..:...:|.||..:|
pombe   182 LEAESEICSKAAWHPKNGTFAVASTDHFVSVISPDDWLPLYKLLPKENHSGVTDISWSSNGMYIA 246

  Fly   245 AGTTKGEVSIFDVKKRKAVTVEIPPSDCNAITCLAWNLSGEVEVAFCDATG-------------- 295
            |...||.:.|:|.:..: |.||:|.|   .:..|||.....| ::|....|              
pombe   247 ASFKKGGILIWDTQSHE-VVVELPYS---TVVALAWQPFENV-LSFTTNQGILYSCPDVIPKSIL 306

  Fly   296 ---------------------QLGTVFLGDAVDTGNGDGLVDDQAELLGDDYEFEAGDDVDTAAD 339
                                 :|..:|..|...:.|.:.|..:.|   .::.||...|.:|::.|
pombe   307 KEENDPTKPLTSSKSKNRTSKELDDLFGSDDEQSQNVNDLDGNSA---NEENEFINHDGLDSSLD 368

  Fly   340 -DGDGVSLEQ------LKRKVMNFAD---PVDHDDASNQSLDSSSRTVPAPVAPQIKLFKQQTAF 394
             |||...:::      .|||.....|   .:::..:..:.|.:|   :..||             
pombe   369 LDGDSYMVDENDLNLAKKRKQKALIDRTTTIENGSSKRRLLQAS---IHKPV------------- 417

  Fly   395 QPSATPADLEHRYMAWNDVGIVTAHVEPSGDSSIDVEFHDASIHHALHISNYNQHNLASVS-SGA 458
            ...:||.....||:..|.||.:....:.:..::|.|||||.:.|...|..:..:..:|.:. .||
pombe   418 HTGSTPWQGNRRYLCLNLVGFIWTVQQDAEHNTITVEFHDETTHRKYHFVDDQKFEMACLDHEGA 482

  Fly   459 L-ALASNESSKLVVIALAA---AGNKEWSLSLP-DCESAEAVVATRFLVAVATSSSFLRIFTVMG 518
            | |..:.|||..|:...|.   :...||:::|| :.||...:..:..:|.|.||:.::|:|:..|
pombe   483 LYASPATESSPGVIYYKAHVDWSRKSEWAMALPMENESPVTISLSSSVVLVCTSAGYVRVFSRQG 547

  Fly   519 TQREVLTIPG-PMVAIAGHEHSLMVVYHSSAPSQTQQHLAAMLVNINGLSLRQEYLPVPLTPGRQ 582
            ....:..... |.||.:..:.:::.:.:....|.....|...:.:|:...:.|....|.|.|...
pombe   548 FPISIHRSKHLPFVACSSFQDTIITIANDGLSSDGNSRLVYSIEDISRDEMLQTGDGVALPPQGT 612

  Fly   583 LTWFGYSDTGSPSIADNMGLLQL---YRRSSNA-WFPICDT--MKQSTSVSHNFFVVAVSEKRQI 641
            |....:||.|.|.|.|:.|:|.:   :|....| |.|:.||  :::..|...:::.|.|::.:  
pombe   613 LESVFFSDVGDPYIYDSTGVLLVLMHWRIPGQAKWIPVLDTNELERRKSRQESYWPVTVADNQ-- 675

  Fly   642 VQAVLCRGTS-YPMTNPRPMLQELRMQIPLC-----DVEVEKSELEDALLRSSLMQM-------D 693
            ...:|.:|.| ||.. ||||..|...:|| |     |.......||:..||:.|...       |
pombe   676 FHCILLKGASRYPYF-PRPMFTEFDFRIP-CNTNNPDASTSVPVLEELQLRNKLFLTLLEDSIGD 738

  Fly   694 G----AEKMQ--------KETAIKLFALACSSECETRARELIESIACTDLLQLAVKYATKRGRIH 746
            |    .||:.        .:..::|...||..|...|..||.:::..|..:..|.|.|......:
pombe   739 GDVTEDEKISIARLEANIDKALLQLIQKACLEERIERVYELTKTLRRTTSIAAAQKIALHHSLTN 803

  Fly   747 LSDRLCELL 755
            :::::..||
pombe   804 VAEKIGNLL 812

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Ctf4NP_610921.1 WD40 12..256 CDD:475233 61/267 (23%)
WD40 repeat 16..52 CDD:293791 14/45 (31%)
WD40 repeat 97..131 CDD:293791 11/46 (24%)
WD40 repeat 138..173 CDD:293791 5/34 (15%)
WD40 repeat 181..223 CDD:293791 8/42 (19%)
WD40 repeat 231..268 CDD:293791 12/36 (33%)
Mcl1_mid 393..669 CDD:463539 76/289 (26%)
mcl1NP_594128.1 WD40 <2..280 CDD:441893 73/296 (25%)
WD40 repeat 16..53 CDD:293791 14/36 (39%)
WD40 repeat 59..93 CDD:293791 5/42 (12%)
WD40 repeat 98..132 CDD:293791 7/33 (21%)
WD40 repeat 141..176 CDD:293791 7/45 (16%)
WD40 repeat 188..225 CDD:293791 6/36 (17%)
WD40 repeat 233..275 CDD:293791 14/45 (31%)
Mcl1_mid 415..703 CDD:463539 78/303 (26%)

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