Sequence 1: | NP_610921.1 | Gene: | Ctf4 / 36551 | FlyBaseID: | FBgn0033890 | Length: | 895 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | NP_505799.1 | Gene: | ctf-4 / 179521 | WormBaseID: | WBGene00008921 | Length: | 1101 | Species: | Caenorhabditis elegans |
Alignment Length: | 1032 | Identity: | 200/1032 - (19%) |
---|---|---|---|
Similarity: | 370/1032 - (35%) | Gaps: | 267/1032 - (25%) |
- Green bases have known domain annotations that are detailed below.
Fly 58 MCIAHTGTRLLASTDRNTIHAYTFPEMDSDGIL--MRFTAPATCLKVSGGYTAAGSEDTTIKVLK 120
Fly 121 GDTAGNETVLEGHTGPILALDLFAERKLLVSVAGDGQLKVWNFEEGKELKTIGGL-PKVNSFE-- 182
Fly 183 ------SASLYGTPHFEPQSGELLAYAVDNEIVVLNTANWEVA--FKLRDDSVSSNYSCCQFSPN 239
Fly 240 GERLAAGTTKGEVSIFDVKKRKAVTVEIPPSDCNAITCLAWNLSGEVEVAFCD--ATGQLGTVFL 302
Fly 303 GDAV------------DTGNGDGLVDDQAELLGDDYEFE-----AGDDVDTAADDGDGVSLEQ-- 348
Fly 349 LKRKVMNFADPVDHDDASNQSLD----------------------------------SSSRTVPA 379
Fly 380 PV--------APQIKLFKQQTAFQPSATPADLE--HRYMAWNDVGIVTAHV-EPSGDSSIDVEFH 433
Fly 434 DASIHHALHISNYN-QHNLASVSSGALALASNESSK----------------------------- 468
Fly 469 -LVVIALAAAGNKEWSLSLPDCESAEAVVATRFLVAVATSSSFLRIFTVMGTQREVLTIPGPMVA 532
Fly 533 IAGHEHSLMVV-------YHSSAPSQTQQHLAAMLVN---------INGLSLRQEYLPVPLTPGR 581
Fly 582 QLTWFGYSDTGSPSIADNMGLLQLYRRSSNAWFPICDTMKQSTSVSHNFFVVAVSEKRQIVQAVL 646
Fly 647 CRGTSYPMTNPRPMLQELRMQIPLCDVEVEKSELEDAL------LRSSLMQMDGAEKMQK----- 700
Fly 701 ETAIKLFALACSSECETRARELIESI-----ACTDLLQLAVKYATKRGRIHLS------------ 748
Fly 749 ---DRLC---ELLPQLEAVQEARKQQTLLGASGIAATIVLPMTPTSASQSGPKPKA-------IE 800
Fly 801 LSSAKRGTLKRLVNSP-------NMFKAAAASAAS----------------RPSTPDITPSPLDT 842
Fly 843 -----QENIFGESESEVPMGKATDHRSPL--------------------NSVNPFAM 874 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
Ctf4 | NP_610921.1 | WD40 | 1..>304 | CDD:225201 | 40/260 (15%) |
WD40 | 12..256 | CDD:295369 | 34/210 (16%) | ||
WD40 repeat | 16..52 | CDD:293791 | |||
WD40 repeat | 97..131 | CDD:293791 | 6/33 (18%) | ||
WD40 repeat | 138..173 | CDD:293791 | 5/34 (15%) | ||
WD40 repeat | 181..223 | CDD:293791 | 9/51 (18%) | ||
WD40 repeat | 231..268 | CDD:293791 | 7/36 (19%) | ||
Mcl1_mid | 393..670 | CDD:289138 | 80/326 (25%) | ||
ctf-4 | NP_505799.1 | WD40 | <112..282 | CDD:392136 | 35/205 (17%) |
WD40 repeat | 113..148 | CDD:293791 | 6/34 (18%) | ||
WD40 repeat | 154..189 | CDD:293791 | 5/34 (15%) | ||
WD40 repeat | 198..239 | CDD:293791 | 9/49 (18%) | ||
WD40 | 240..>330 | CDD:392136 | 22/120 (18%) | ||
WD40 repeat | 247..288 | CDD:293791 | 12/66 (18%) | ||
WD40 repeat | 295..320 | CDD:293791 | 3/24 (13%) | ||
Mcl1_mid | 442..764 | CDD:372058 | 80/324 (25%) | ||
Blue background indicates that the domain is not in the aligned region. |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 1 | 0.930 | - | - | C160165958 | |
Domainoid | 1 | 1.000 | 97 | 1.000 | Domainoid score | I4551 |
eggNOG | 1 | 0.900 | - | - | E1_KOG1274 | |
Hieranoid | 1 | 1.000 | - | - | ||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 1 | 1.050 | 126 | 1.000 | Inparanoid score | I3263 |
Isobase | 0 | 0.000 | Not matched by this tool. | |||
OMA | 1 | 1.010 | - | - | QHG55477 | |
OrthoDB | 1 | 1.010 | - | - | D155530at2759 | |
OrthoFinder | 1 | 1.000 | - | - | FOG0005096 | |
OrthoInspector | 1 | 1.000 | - | - | oto17872 | |
orthoMCL | 1 | 0.900 | - | - | OOG6_102719 | |
Panther | 1 | 1.100 | - | - | LDO | PTHR19932 |
Phylome | 1 | 0.910 | - | - | ||
RoundUp | 1 | 1.030 | - | avgDist | Average_Evolutionary_Distance | R690 |
SonicParanoid | 1 | 1.000 | - | - | X4720 | |
SwiftOrtho | 0 | 0.000 | Not matched by this tool. | |||
TreeFam | 1 | 0.960 | - | - | ||
15 | 14.800 |