DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Ctf4 and Ctf4

DIOPT Version :10

Sequence 1:NP_610921.1 Gene:Ctf4 / 36551 FlyBaseID:FBgn0033890 Length:895 Species:Drosophila melanogaster
Sequence 2:XP_061507487.1 Gene:Ctf4 / 1269764 VectorBaseID:AGAMI1_011817 Length:995 Species:Anopheles gambiae


Alignment Length:926 Identity:367/926 - (39%)
Similarity:521/926 - (56%) Gaps:79/926 - (8%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MSFLRSALRYAHTNGYTGLLYTPRGEFIITCGTDGDIRHWTCISDDDPRSSCLGEFVMCIAHTGT 65
            |.|.||.:||||..|||.:.|...|..||:.|.|||.|.|..|.||||.:.|:||.|......|.
Mosquito     1 MPFKRSPMRYAHIMGYTSVTYQDDGNCIISVGYDGDFRIWNGIGDDDPPTVCVGEHVWAALQYGD 65

  Fly    66 RLLASTDRNTIHAYTFPEMDSDGILMRFTAPATCLKVSGGYTAAGSEDTTIKVLKGDTAGNETVL 130
            |:|.:||.||:.||.:|.:|.|||..||||..||:..:..:.||||||.|||||..|. |.:..|
Mosquito    66 RVLVATDLNTVQAYKYPSLDKDGIEFRFTAFVTCMAKNKRFIAAGSEDATIKVLSVDD-GEQFEL 129

  Fly   131 EGHTGPILALDLFAERKLLVSVAGDGQLKVWNFEEGKELKTIGGLPKVNSFESASLYGTPHFEPQ 195
            |...||:|::|. :::.||.:..|||:|.:|:.:..:..|||..||||.|||:...:.:|.|||:
Mosquito   130 ENLEGPVLSMDA-SKQDLLAASIGDGKLHIWDMKTKELKKTIHDLPKVKSFEAVVHFSSPTFEPK 193

  Fly   196 SGELLAYAVDNEIVVLNTANWEVAFKLRDDSVSSNYSCCQFSPNGERLAAGTTKGEVSIFDVKKR 260
            .|.||||....|:::|||.:|:|..|..:..:|:..:.|:|||.|:.||||:..|::.|:|.:..
Mosquito   194 KGNLLAYPNGKEVILLNTTSWDVVKKFVNPKLSTTLTVCRFSPMGDYLAAGSESGDICIWDCETG 258

  Fly   261 KAVTVEIPPSDCNAITCLAWNLSGEVEVAFCDATGQLGTV---FLGDAVDTGNGDGLVDDQAELL 322
            |.|..: .|.|.|.||.|.||.....|:|..|..||:|||   |:....|...|..:| ..||..
Mosquito   259 KLVEGD-KPYDANPITKLVWNPKNNGELALSDGNGQVGTVTDIFVEGGEDDAEGADIV-AMAEKE 321

  Fly   323 GDDYEFEAGDDV--------------DTAADD---GDGVSLEQLKRKVMNFADPVDHDDA--SNQ 368
            .||.:.:|.||:              |.:.||   .:.:.||:||.:||.   |....|.  |:.
Mosquito   322 DDDEDDDAFDDLFNAHLKPDERDSENDASGDDEANENCIELEKLKSQVMG---PTQKSDGAMSDA 383

  Fly   369 SLDSSSR-TVPAPVAPQIKLFKQQTAFQPSATPADLEHRYMAWNDVGIVTAHVEPSGDSSIDVEF 432
            ..|...| ||.:......|.:.||..||||:||..|||.|:.:|.||||..|.... ::||:|||
Mosquito   384 GFDDDDRGTVRSERLAVAKSYPQQHPFQPSSTPNSLEHCYLVYNHVGIVRRHATDK-ENSIEVEF 447

  Fly   433 HDASIHHALHISNYNQHNLASVSSGALALA-SNES---SKLVVIALAAAGNKEWSLSLPDCESAE 493
            ||:..||.:|::|:..|.:|.:|...||:| .||.   ||:|.|..||.|.:||:.::|.||...
Mosquito   448 HDSQQHHGIHLNNFLNHTMAGLSETVLAMACPNEDGNPSKIVCINQAAFGKREWTYTMPGCEEII 512

  Fly   494 AVVATRFLVAVATSSSFLRIFTVMGTQREVLTIPGPMVAIAGHEHSLMVVYHSSAPSQTQQHLAA 558
            ||.|:..:|.|||.|..||::|..||||||:.:.||:||:|.:....:|.|| |||:...||::.
Mosquito   513 AVTASDKIVVVATDSRLLRVYTARGTQREVIAVAGPIVALAAYGDHFLVAYH-SAPANEDQHISL 576

  Fly   559 MLVNINGLSLRQEYLPVPLTPGRQLTWFGYSDTGSPSIADNMGLLQLYRRSSNAWFPICDT-MKQ 622
            |:|......||...:.||||.|.::.|.||||.|||::.|..|:|.:|..:||.|.||.:. ..|
Mosquito   577 MIVTCVNFKLRCREVRVPLTAGSEMQWVGYSDRGSPAVYDTAGMLNIYHATSNLWLPIYNAEYLQ 641

  Fly   623 STSVSHNFFVVAVSEKRQIVQAVLCRGTSYPMTNPRPMLQELRMQIPLCDVEVEKSELEDALLRS 687
            :...|.:.|::.|||..|.||.|||||:.||:|.|:|:..|::..:|:||:|.||..|||.|:||
Mosquito   642 TKGASDHLFIIKVSESTQHVQLVLCRGSKYPLTTPKPIPMEVKFALPMCDLESEKECLEDDLVRS 706

  Fly   688 SLMQMDGAEKMQKETAIKLFALACSSECETRARELIESIACTDLLQLAVKYATKRGRIHLSDRLC 752
            ..::::.|:|:.||||:|||||||.:|||.||:||:|:||.:.|:.|.:|||:|..|.||:|.|.
Mosquito   707 LYLKVNDADKLMKETAVKLFALACKNECEQRAKELVETIASSHLIPLVIKYASKIRRYHLADSLA 771

  Fly   753 ELLP--QLEAVQEARKQQTLLGASGIAATIV-----LPMTPTSASQSGPKPKAIELSSAKRGTLK 810
            .|||  |.:.|||.:.:|..:..:   |.||     :.:...:...:.||.|.:.:.:.|     
Mosquito   772 PLLPTFQEQEVQEEKLEQESVREN---AAIVNELQHINLEAITKKDTTPKIKPLPVGTKK----- 828

  Fly   811 RLVNSPNMFKAAAASAASRPSTPDI--------TPSPLD--TQENI-FGESESEVPM--GKAT-- 860
                ..|.|:.:.|:|....|:|..        :.:||:  |.:.| |..|.|..|.  .|.|  
Mosquito   829 ----PTNPFRKSTAAATDGISSPASSSGHTGANSSNPLEHLTGKAIGFSASRSSSPSVGSKLTSS 889

  Fly   861 --------DHRSPLNS 868
                    |...|.||
Mosquito   890 SVDATGGQDENRPQNS 905

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Ctf4NP_610921.1 WD40 12..256 CDD:475233 107/243 (44%)
WD40 repeat 16..52 CDD:293791 17/35 (49%)
WD40 repeat 97..131 CDD:293791 15/33 (45%)
WD40 repeat 138..173 CDD:293791 11/34 (32%)
WD40 repeat 181..223 CDD:293791 18/41 (44%)
WD40 repeat 231..268 CDD:293791 14/36 (39%)
Mcl1_mid 393..669 CDD:463539 123/280 (44%)
Ctf4XP_061507487.1 None

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