DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG6701 and HCS1

DIOPT Version :10

Sequence 1:NP_610920.3 Gene:CG6701 / 36550 FlyBaseID:FBgn0033889 Length:1333 Species:Drosophila melanogaster
Sequence 2:NP_012908.1 Gene:HCS1 / 853852 SGDID:S000001500 Length:683 Species:Saccharomyces cerevisiae


Alignment Length:767 Identity:184/767 - (23%)
Similarity:314/767 - (40%) Gaps:194/767 - (25%)


- Green bases have known domain annotations that are detailed below.


  Fly   381 LSALKHEDAQMCLASFDNQYQNYCERGREITQENLTGTLRTLLQVEDIERLQHYLSLKQSEMELH 445
            ||::||                  ||.::|   ..|..|.|.|.::.:  :|:.|::....:|..
Yeast    10 LSSIKH------------------EREQDI---QTTSRLLTTLSIQQL--VQNGLAINNIHLENI 51

  Fly   446 QFGRELSVKMQMGTTSMSVEDILSPGD----DVLI-------INEKGNPKSAVRKMLENNNNVLE 499
            :.|....:.|::| .:::|.|.:..||    |:::       :|.|..||  |:|:.|::|.  |
Yeast    52 RSGLIGKLYMELG-PNLAVNDKIQRGDIKVGDIVLVRPAKTKVNTKTKPK--VKKVSEDSNG--E 111

  Fly   500 LALKDFDSILRWARNVDGMVGSLDKQPRVYFARILGVSTQRVNITCERQLPDNTTYTLIFRPLRA 564
            .|            ...|:|..:              |..::.|..|..           :.:.|
Yeast   112 QA------------ECSGVVYKM--------------SDTQITIALEES-----------QDVIA 139

  Fly   565 VMRYQYRALQQL------SFTRHSDVQRILFPGEIPNTPLASGVLQ--LNNKLISTNPEQMQAVR 621
            ...|.|..|..|      ::.|.....|.|  .|| ::|:...::|  :|.:....|....|.::
Yeast   140 TTFYSYSKLYILKTTNVVTYNRMESTMRKL--SEI-SSPIQDKIIQYLVNERPFIPNTNSFQNIK 201

  Fly   622 QIALSPRLKAPY-------------IVFGPPGTGKTSTIVEAIYQLYINRPETHILVLAGSNTAC 673
            .. |:|.|....             |:.||||||||.|::|.|.||.|..||..||:...||.:.
Yeast   202 SF-LNPNLNDSQKTAINFAINNDLTIIHGPPGTGKTFTLIELIQQLLIKNPEERILICGPSNISV 265

  Fly   674 DEVALRLLRAI-----------AKAPQSQPRPLTRIFS-----------------------ANCD 704
            |.:..||...:           |:...|..|....|.|                       .|..
Yeast   266 DTILERLTPLVPNNLLLRIGHPARLLDSNKRHSLDILSKKNTIVKDISQEIDKLIQENKKLKNYK 330

  Fly   705 RRIDNIDDLLLEYSNMYTVHFYPAVQAVHQYRIVICTLSLAGKLSTGGFAANN----VYTHVFVD 765
            :|.:|.:::.|...::....|......:.|.|||:.||..:..........::    ::..:.:|
Yeast   331 QRKENWNEIKLLRKDLKKREFKTIKDLIIQSRIVVTTLHGSSSRELCSLYRDDPNFQLFDTLIID 395

  Fly   766 EAAASTEAEVLMGITCTLSPTLNLILSGDHKQLGPVLQSQRANE--WGLGLTLFERLLQRKCYQV 828
            |.:.:.|.:..:.:....:....|:|:||:|||.|.::::....  ..|..|||:|::  |.:. 
Yeast   396 EVSQAMEPQCWIPLIAHQNQFHKLVLAGDNKQLPPTIKTEDDKNVIHNLETTLFDRII--KIFP- 457

  Fly   829 EEDGSYNASVQTRL---IRNFRSHPEIVSLYNNMYYEGHLRTEAPMEIVCRFHNWFYLP--NAT- 887
            :.|.....:||.|:   |..|.||    |:||     |.|..:|  .:..|.  ...||  :|| 
Yeast   458 KRDMVKFLNVQYRMNQKIMEFPSH----SMYN-----GKLLADA--TVANRL--LIDLPTVDATP 509

  Fly   888 --------FPIMFHSVFGTT-MNTKSSVSLCNNK----EIDVVMDYVKDLMYFGLNGEKLLQTDI 939
                    .|::::...|.. ..|....::..:|    ||.:|.:::::|..|.:.     :..|
Yeast   510 SEDDDDTKIPLIWYDTQGDEFQETADEATILGSKYNEGEIAIVKEHIENLRSFNVP-----ENSI 569

  Fly   940 GIISPYKNQYQR----IQEQLNMRNWSQIDCGSVELFQGKEKHVIIVSFVRSFTP-KLGFLNNER 999
            |:||||..|...    |.::|.:   :.|:..:|:.|||:||.|||:|.|||... ::|||..||
Yeast   570 GVISPYNAQVSHLKKLIHDELKL---TDIEISTVDGFQGREKDVIILSLVRSNEKFEVGFLKEER 631

  Fly  1000 RLNVLLSRPISLLILIGNPRTLSQ--NSDFQHIIEMCRNRKTLVGEQYLNED 1049
            ||||.::||...|:::||...|.:  |...:...|.|.....:   :|.|.|
Yeast   632 RLNVAMTRPRRQLVVVGNIEVLQRCGNKYLKSWSEWCEENADV---RYPNID 680

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG6701NP_610920.3 DEXXQc_Helz-like 611..847 CDD:350796 67/291 (23%)
SF1_C_Upf1 848..1035 CDD:350195 62/209 (30%)
HCS1NP_012908.1 TIGR00376 15..679 CDD:273041 179/759 (24%)

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