DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG6701 and AT1G65780

DIOPT Version :9

Sequence 1:NP_001188923.1 Gene:CG6701 / 36550 FlyBaseID:FBgn0033889 Length:1333 Species:Drosophila melanogaster
Sequence 2:NP_176754.1 Gene:AT1G65780 / 842889 AraportID:AT1G65780 Length:1065 Species:Arabidopsis thaliana


Alignment Length:1210 Identity:260/1210 - (21%)
Similarity:434/1210 - (35%) Gaps:344/1210 - (28%)


- Green bases have known domain annotations that are detailed below.


  Fly   222 KIEKYEEHVEYHGD-----------ESDFQSLKKMKK-YPTPIVSLSYQTCVDSHYFGFTLKTFR 274
            ::||.....|..||           |:....|..|:| :..|:|.:||           .::|..
plant    32 QVEKIPMEFESTGDYFKTFIPPLIEETHAALLSSMRKLWQAPVVEISY-----------IMQTAE 85

  Fly   275 KDLVVDKFIIVQLRQFYYVYGAQMPLPVNGSGELVFFVDSHVFMILREQP-IVIGFTIQGEKYVE 338
            ..|..|.|..|:|.........:: :|    .:|:...|        ::| .|.||.|..|.|: 
plant    86 YKLPNDLFYKVRLSGISNEASTKL-MP----RDLISLTD--------QRPNHVDGFNISSEPYI- 136

  Fly   339 QHHFMRTEALPKASFNINPYR------LSSKETFKSKGLPPANPP---------------IQVLS 382
                   .||   ...::|.|      |:||..|...|....|..               |::.:
plant   137 -------VAL---VCKVDPDRPNDVTILASKPLFVEDGRRKKNEKKERLFGIHLVNLTTNIRIWN 191

  Fly   383 AL------------------KHEDAQMCLASFDNQYQNYCERGREI----TQENLTGTLRTLLQV 425
            ||                  ..||...|:............| |.:    :||:      .:|..
plant   192 ALHPGDEGVNLNLISRVLRRNSEDEGFCIQCLQEGSDGLAPR-RFLKLNPSQED------AILNC 249

  Fly   426 EDIERLQHYLSL------------KQSEMELHQFGRELSVKMQMGTTSMSVEDILSP-------- 470
            .|:.|..|..::            |.:.:.|..........:..|.|::||.::.|.        
plant   250 LDVRRCYHANTVRLIWGPPGTGKTKTTSVLLFTLLNAKCRTLTCGPTNVSVLEVASRVLKLVSGS 314

  Fly   471 --------GDDVLIINEKGNPKSAVRKMLENNNNVLELALKD--------FDSILRWARNVDGMV 519
                    ||.||..|::       |..:::..:::.:.:.:        |.....|...:|||:
plant   315 LKIGNYGLGDVVLFGNDE-------RMKIKDRKDLVNIFIDERVDKLYPCFMPFYGWKATIDGMI 372

  Fly   520 GSLDKQPRVY------FARILGVSTQRVNITCERQLPDNTTYTLIFRPLRAVMRYQYRALQQLSF 578
            ..|:.....|      .||...|..:......:|:..:...                ..::|:|.
plant   373 RLLEDPKGQYNLYLENLARANNVKRKDTGSVFKRKGNEQNE----------------NIVEQVSD 421

  Fly   579 TRHSDVQRIL--------------FPGEIPNTPLASGVLQLNNKLISTNPEQMQAVRQIALSPRL 629
            ||....|..|              |.....:.|.|    .|:::..:...|.:..||.:.:..  
plant   422 TRPQSFQDYLPEKFSELRKDLDLHFSSLCTHLPTA----LLSSQAATRMYEAIDLVRDVTILA-- 480

  Fly   630 KAPYIVFGPPGTGKTSTIVEAIYQLYINRP---------ETHILVLAGSNTACDEVALRLLRAIA 685
                |:.|..|.|..|.::          |         ..|:.|        ::..|:|||:| 
plant   481 ----ILDGVTGEGVKSVLI----------PNGEGSDRFSSQHVTV--------EDDYLKLLRSI- 522

  Fly   686 KAPQSQPRPLTRIFSANCDRRIDNIDDLLLEYSNMYTVHFYPAVQAVHQYRIVICTLSLAGKLST 750
              |:..|.|      |..||.:  |.:|.|.::                 .::..|.|.:.:|.|
plant   523 --PEIFPLP------AVSDRHL--IKELCLGHA-----------------CLLFSTASCSARLYT 560

  Fly   751 GGFAANNVYTHVFVDEAAASTEAEVLMGITCTLSPTLNLILSGDHKQLGPVLQSQRANEWGLGLT 815
            |     .....:.:||||...|.|  ..|...|....:|||.||.:||..:::||.|.|.|.|.:
plant   561 G-----TPIQLLVIDEAAQLKECE--SSIPMQLPGLRHLILVGDERQLPAMVESQIALEAGFGRS 618

  Fly   816 LFER--LLQRKCYQVEEDGSYNASVQTRLIRNFRSHPEIVSLYNNMYYEGHLRTEAPMEIVCRFH 878
            ||||  ||..|.|.:        ::|      :|.|..|.|..|...| |....:||   ..|..
plant   619 LFERLALLGHKKYML--------NIQ------YRMHCSISSFPNKELY-GKKILDAP---TVRQR 665

  Fly   879 NWF--YLPNATF-PIMFHSV-FG-TTMNTKSSVSLCNNKEIDVVMDYVKDLMYFGLNGEKLLQTD 938
            |:.  |||...: |..|.:: :| .........||.||.|:.||...:.:|:.  ::.:...:.:
plant   666 NYTKQYLPGEMYGPYSFINIAYGREEYGEGEGRSLKNNVEVVVVAAIIANLLQ--VSEKTKTRIN 728

  Fly   939 IGIISPYKNQYQRIQEQLNMRNWSQIDCG--------SVELFQGKEKHVIIVSFVRS-FTPKLGF 994
            :|:|||||.|...|||::  :..|..|.|        :|:.|||.|:.:||||.||| ...::||
plant   729 VGVISPYKAQVIAIQEKI--QETSIGDAGGLFSLRIRTVDGFQGGEEDIIIVSTVRSNGVGRVGF 791

  Fly   995 LNNERRLNVLLSRPISLLILIGNPRTL-SQNSDFQHIIEMCRNRKTLVGEQYLNEDFITNKKTGA 1058
            |.|.||.||||:|....|.::||..|| :..|.::::|:..:.|...   ....||....:...:
plant   792 LGNRRRTNVLLTRARFCLWILGNEATLMNSKSVWRNLIQDAKERGCF---HSAGEDESLAQAIAS 853

  Fly  1059 NNVNKGGAAGDQPASGLRQPL-------KRKNHAKNPVQDAKIFYSKNELLNLGNE-CQRKKSEL 1115
            .|:.      .:|.:..:..|       |.....|||....||   ||.|..|... .:.:::|.
plant   854 TNIE------FRPLNNSKWKLCFSDEFKKYVGEIKNPETYRKI---KNFLERLSQGWLKEEETER 909

  Fly  1116 ETIFDELPKVPRS-VDHDLDEVRSIEAQLKDFQLETKQDAAGTSILVTNAPVTNAAAPSVIPRAG 1179
            |.:......:.:| :|..|..:.:::...:||..:        .:|.....|.::.||..:.|..
plant   910 ENLVSSSQLLKQSKIDDVLRIIWAVDILKEDFHYD--------QVLKIWDVVPSSDAPEALKRLD 966

  Fly  1180 LMKQETPALHSSSVSRPAIRKPTVSAATPVAKSRSPMPEIPSSSKHPISMSSNPLSTNTERCVNG 1244
                    |:.::.::..|.|         .|:|....:|....:..|.      |||.....:.
plant   967 --------LNHTNYTKDEIEK---------CKARCIRGDIVVPMRWSIE------STNGIPEKSS 1008

  Fly  1245 VLCGIEAVPPSENKTTRSSAYNHIPSGNFRFENVRPTPEE 1284
            |:|..:.:....:........:.:||.    ::|.|...|
plant  1009 VVCSSDVIKTFGSLNLVGEMLSSVPSN----DSVEPLEVE 1044

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG6701NP_001188923.1 TIGR00376 424..1037 CDD:273041 165/694 (24%)
AAA_19 618..687 CDD:289986 15/77 (19%)
AAA_12 812..1019 CDD:289832 74/222 (33%)
AT1G65780NP_176754.1 AAA_11 237..608 CDD:289831 85/462 (18%)
DEXDc 261..>347 CDD:238005 13/92 (14%)
DNA2 <566..845 CDD:224037 100/305 (33%)
AAA_12 615..814 CDD:289832 72/220 (33%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG1112
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
21.810

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