DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG6701 and SDE3

DIOPT Version :10

Sequence 1:NP_610920.3 Gene:CG6701 / 36550 FlyBaseID:FBgn0033889 Length:1333 Species:Drosophila melanogaster
Sequence 2:NP_172037.1 Gene:SDE3 / 837047 AraportID:AT1G05460 Length:1002 Species:Arabidopsis thaliana


Alignment Length:809 Identity:214/809 - (26%)
Similarity:373/809 - (46%) Gaps:165/809 - (20%)


- Green bases have known domain annotations that are detailed below.


  Fly   316 VFMILREQPIVIGFTIQGEKYVEQHHFMRTEALPKASFNINPYRLSSK------ETFKSKGLPPA 374
            |..:|.|..|....|       ....:.|:...||..|.::.|...|:      .:|::: ||..
plant   161 VVFLLAEDKISSSLT-------SNRPYSRSRRAPKKDFAVDDYVKGSRPSKVVERSFRNR-LPLY 217

  Fly   375 NPPIQVLSALKHEDAQMCLASFDNQYQNYCERGREITQENLTGTLRTLLQVEDIERLQHYLSLKQ 439
            ..|.::...::::           ::.:....|  :|..|.....:|||.:|::          |
plant   218 EIPKEIREMIENK-----------EFPDDLNEG--LTARNYANYYKTLLIMEEL----------Q 259

  Fly   440 SEMELHQFGRELSVKMQMGTTSMSVEDILSPGDDVLIINEKGNPKSAVRKMLENNNNVLELALKD 504
            .|.::..:..| :|.|:.....:|:|   .||                  :.|...:::.   .|
plant   260 LEEDMRAYDME-NVSMKRRGIYLSLE---VPG------------------LAERRPSLVH---GD 299

  Fly   505 FDSILRWARNVDGMVGSLDKQPRVYFARILGVSTQRVNITCERQLPDNTTYTLIFRPLRAVMRYQ 569
            | ..:|.|.:        |.....|...:..|....|::....:.....|...::.     :|:.
plant   300 F-IFVRHAYD--------DGTDHAYQGFVHRVEADEVHMKFASEFHQRHTAGSVYN-----VRFT 350

  Fly   570 YRALQQLSFTRHSDVQRILFPGEI-PNTPLASGVLQLNNKLISTNPEQMQAVRQIALSPRLKA-- 631
            |..:......:..|...:|.|..: |:  |.||     .::|.|.|       .:.:||.|.|  
plant   351 YNRINTRRLYQAVDAAEMLDPNFLFPS--LHSG-----KRMIKTKP-------FVPISPALNAEQ 401

  Fly   632 --------------PYIVFGPPGTGKTSTIVEAIYQLYINRPETHILVLAGSNTACDEVALRLLR 682
                          ||::.||||||||.|:||||.|||..:....:||.|.||:|.|.:..:|| 
plant   402 ICSIEMVLGCKGAPPYVIHGPPGTGKTMTLVEAIVQLYTTQRNARVLVCAPSNSAADHILEKLL- 465

  Fly   683 AIAKAPQSQPRPLTRIFSANCDRRIDNIDDLLLEYSNMYTVHF-YPAVQAVHQYRIVICTLSLAG 746
             ..:..:.:...:.|:.:|.  |..:.|...::.:.....:.| .|.::|:.:|::|:.|...|.
plant   466 -CLEGVRIKDNEIFRLNAAT--RSYEEIKPEIIRFCFFDELIFKCPPLKALTRYKLVVSTYMSAS 527

  Fly   747 KLSTGGFAANNVYTHVFVDEAAASTEAEVLMGIT--CTLSPTLNLILSGDHKQLGPVLQSQRANE 809
            .|:..|....: :||:.:|||..::|.|.::.::  | |:.|: ::|:||.:|||||:.|:.|..
plant   528 LLNAEGVNRGH-FTHILLDEAGQASEPENMIAVSNLC-LTETV-VVLAGDPRQLGPVIYSRDAES 589

  Fly   810 WGLGLTLFERLLQRKC-YQVEEDGSYNASVQTRLIRNFRSHPEIVSLYNNMYYEGHL-RTEAPME 872
            .|||.:..|||.:  | |..|.|.:|    .|:|::|:|.||||:.|.:.::|:|.| .::...:
plant   590 LGLGKSYLERLFE--CDYYCEGDENY----VTKLVKNYRCHPEILDLPSKLFYDGELVASKEDTD 648

  Fly   873 IVCRFHNWFYLPNATFPIMFHSVFGTTMNTKSSVSLCNNKEIDVVMDYVKDLMYFGLNGEKLLQT 937
            .|....|  :|||..||::|:.:.|......::.|..|..||..|::.:|.|    ...:.:.:.
plant   649 SVLASLN--FLPNKEFPMVFYGIQGCDEREGNNPSWFNRIEISKVIETIKRL----TANDCVQEE 707

  Fly   938 DIGIISPYKNQYQRIQEQLNMRNWSQIDCGSVELFQGKEKHVIIVSFVRSFTPK---------LG 993
            |||:|:||:.|..:|:|.|:..:.:::..||||.|||:||.|||:|.||| |.|         ||
plant   708 DIGVITPYRQQVMKIKEVLDRLDMTEVKVGSVEQFQGQEKQVIIISTVRS-TIKHNEFDRAYCLG 771

  Fly   994 FLNNERRLNVLLSRPISLLILIGNPRTLSQNSDFQHIIEMCRNRKTLVG------EQYLNEDFIT 1052
            ||:|.||.||.::|.||||::||||..:.::.::..::..|.:.....|      |:::.|.|  
plant   772 FLSNPRRFNVAITRAISLLVIIGNPHIICKDMNWNKLLWRCVDNNAYQGCGLPEQEEFVEEPF-- 834

  Fly  1053 NKKTGANN---------------VNKGGA 1066
             |:.|::|               :|.|||
plant   835 -KQEGSSNGPQYPPEAEWNNSGELNNGGA 862

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG6701NP_610920.3 DEXXQc_Helz-like 611..847 CDD:350796 80/255 (31%)
SF1_C_Upf1 848..1035 CDD:350195 70/196 (36%)
SDE3NP_172037.1 DEXXQc_Helz-like 396..622 CDD:350796 76/238 (32%)
SF1_C_Upf1 623..812 CDD:350195 70/195 (36%)
dermokine <815..>962 CDD:455732 11/51 (22%)

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