DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG6701 and AT5G52090

DIOPT Version :9

Sequence 1:NP_001188923.1 Gene:CG6701 / 36550 FlyBaseID:FBgn0033889 Length:1333 Species:Drosophila melanogaster
Sequence 2:NP_200022.1 Gene:AT5G52090 / 835285 AraportID:AT5G52090 Length:676 Species:Arabidopsis thaliana


Alignment Length:644 Identity:143/644 - (22%)
Similarity:223/644 - (34%) Gaps:236/644 - (36%)


- Green bases have known domain annotations that are detailed below.


  Fly   598 LASGVLQLNNK-----LISTNPEQMQAVRQIALSPRLKAPY--------------------IVFG 637
            |...|||.|.:     ..|.|..:...|..|..|.:|.:..                    :::|
plant    22 LTKSVLQANTEGTEQCFCSENDGRSDLVLDIIRSTKLNSSQEDAILGCLETRNCTHKNSVKLIWG 86

  Fly   638 PPGTGKTSTIVEAIYQLYINRPETHILVLAGSNTACDEVALRLL---RAIAKAPQSQPRPLTRIF 699
            ||.||||.|:...::.|...|.:|  :|.|.:|||..:|..|||   :..:.|..:..|....|.
plant    87 PPRTGKTKTVATLLFALLKLRCKT--VVCAPTNTAIVQVTSRLLSLFKENSTAENATYRLGNIIL 149

  Fly   700 SANCDR----------------------------------RIDNIDDLLLEYSNMYTVHFY---- 726
            |.|.||                                  |::::...|......|..|.|    
plant   150 SGNRDRMGINKNDHVLLDVFLDERIGKLGKLFSPFSGWMQRLESLIQFLENPEGKYERHVYELEE 214

  Fly   727 ----------------------------------------------PAV--------------QA 731
                                                          |.|              |.
plant   215 VERMNEEDEREEVVVNIPTFGEFVQKNFNSLSEEVKTCIVDLYTHLPKVYLPYEDVKKMIASRQT 279

  Fly   732 VHQYR------------------------------------------------------------ 736
            :.:.|                                                            
plant   280 LQRIRYFLRENSSRVDFEEGNFRFDCFKRLSDDCLKALRLLPKRFEIPDMLENEDIRKFCLQNAD 344

  Fly   737 IVICTLSLAGKLS---TGGFAANNVYTHVFVDEAAASTEAEVLMGITCTLSPTLNLILSGDHKQL 798
            |::||.|.|.:::   ||     ||...| |||||...|.|.:..:  .|....:.||.||..||
plant   345 IILCTASGAAEMNVERTG-----NVELLV-VDEAAQLKECESVAAL--QLPGLRHAILIGDEFQL 401

  Fly   799 GPVLQSQRANEWGLGLTLFERLLQRKCYQVEEDGSYNASVQTRLIRNFRSHPEIVSLYNNMYYEG 863
            ..::.::...:...|.:|||||:      :.....:...||      :|.||.|....|..:|.|
plant   402 PAMVHNEMCEKAKFGRSLFERLV------LLGHNKHLLDVQ------YRMHPSISRFPNKEFYGG 454

  Fly   864 HLR-TEAPMEIVCRFHNWFYLPNATFPIMFHSV------FGTTMNTKSSVSLCNNKEIDVVMDYV 921
            .:: .|...|.:  :...|...|......|.:|      ||...:.|:.|      |:.|:.:.:
plant   455 RIKDAENVKESI--YQKRFLKGNMFDSFSFINVGRGKEEFGDGHSPKNMV------EVAVISEII 511

  Fly   922 KDLMYFGLNGEKLLQTDIGIISPYKNQYQRIQEQLNMRNWS------QIDCGSVELFQGKEKHVI 980
            .:|  :.::.|:.::..:|::||||.|.:.|||::..:..|      .::..||:.|||.|:.:|
plant   512 SNL--YKVSCERRMKVSVGVVSPYKGQMRAIQEKIGDKYSSLSGQQFTLNVRSVDGFQGGEEDII 574

  Fly   981 IVSFVRS-FTPKLGFLNNERRLNVLLSRPISLLILIGNPRTLS-QNSDFQHIIEMCRNR 1037
            |:|.||| ...|:|||||.:|.||.|:|....|.:|||..||: ..|.:..:|...|.|
plant   575 IISTVRSNGNGKVGFLNNRQRANVALTRARHCLWVIGNETTLALSGSIWATLISESRTR 633

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG6701NP_001188923.1 TIGR00376 424..1037 CDD:273041 142/642 (22%)
AAA_19 618..687 CDD:289986 24/91 (26%)
AAA_12 812..1019 CDD:289832 66/220 (30%)
AT5G52090NP_200022.1 AAA_11 57..408 CDD:289831 61/360 (17%)
DEXDc 83..>165 CDD:238005 27/83 (33%)
DNA2 <324..616 CDD:224037 90/321 (28%)
AAA_12 415..612 CDD:289832 64/218 (29%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG1112
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
21.810

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