DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG6701 and helz2b

DIOPT Version :9

Sequence 1:NP_001188923.1 Gene:CG6701 / 36550 FlyBaseID:FBgn0033889 Length:1333 Species:Drosophila melanogaster
Sequence 2:XP_699251.2 Gene:helz2b / 570654 ZFINID:ZDB-GENE-070912-617 Length:2781 Species:Danio rerio


Alignment Length:1121 Identity:249/1121 - (22%)
Similarity:406/1121 - (36%) Gaps:352/1121 - (31%)


- Green bases have known domain annotations that are detailed below.


  Fly   195 QKRLLLQSDKDFELQSLGCYICQENFEKIEKYEEHVEYHGDESDFQSLKKMKKYPTPIVSLSYQT 259
            |::...:|.|:          .|.:|:::..|:|              |.:::|.    |.|.:.
Zfish   126 QRKRRAESKKE----------AQPSFQELSSYQE--------------KLLEEYR----SSSNEI 162

  Fly   260 CVDSHYFGFTLKTFRKDLVVD----------KFIIVQLRQFYYV------YGAQMPL-------- 300
            .|.|.:......|..::|.:|          ||.|...|...:|      .||...|        
Zfish   163 LVISEHVDDVRVTHDENLSMDCLQEDNEIRWKFTITTERSLAHVALLKVENGAVFSLSDSLRNTI 227

  Fly   301 -PVN--GSGEL----------VFFVDSH--------VF------MILREQPIVIG--FTIQGEKY 336
             |:.  ...||          |.|:..|        ||      ::||:..:.:|  |.:|.|:.
Zfish   228 PPITHIAGHELRSSQSTYQLSVSFLSFHPGVYEQWLVFDFDMRPVLLRKLKVRVGQQFLVQPEEA 292

  Fly   337 VEQH--HFMRTEALPKASFNINPY--RLSSKETFKSKGLPPA-----NPPIQVLSALKHEDAQMC 392
            .|..  ..:..|...:.:..|.|:  |....|...||..||.     ||         |.|..:.
Zfish   293 EESECAEILSNERWNRGNRVIVPFFARKEEDEQLLSKYKPPQLNLQFNP---------HADHSLP 348

  Fly   393 LASFDNQYQNYCERG------REITQENLTGTLRTLLQVEDIERLQHYLSLKQSEMELHQFGREL 451
            |     ..:||.||.      .||.:|.|...|.....|.    |.::||...|...........
Zfish   349 L-----HRENYRERAHHFLFREEIAEEELISRLNVCGTVS----LSNHLSDAMSLFYAAPGKLFA 404

  Fly   452 SVKMQMGTTSMSVED-ILSPGDDVLIINEKGNPKSAVRKMLENNNNVLE-LALKDFDSILRWARN 514
            ::|:....|..|.|. :|..|..:.::|.|....|   ...|:.|:|.| ..:|:          
Zfish   405 NLKVSCSLTPDSPEGVVLKRGVQMALVNCKSTKAS---MSAEHRNHVYEAFVMKE---------- 456

  Fly   515 VDGMVG----SLDKQPRVYFARILGVSTQRVNITCERQLPDNTTYTLIFRPLRAVMRYQYRALQQ 575
               .||    ||:            :|||.|:   |.:|...||         ..|..|:: |.:
Zfish   457 ---TVGEGHLSLE------------LSTQCVS---ELELRKETT---------CEMEVQFQ-LNR 493

  Fly   576 LSFTR-HSDVQRILFPGEIPNTPLASGVL----------------QLNNKLISTNPEQMQAVRQI 623
            |||.: |..:.|:         |....||                |||||            :||
Zfish   494 LSFCQIHQAIDRL---------PDLHNVLPDFSNCCVPVNLTKQSQLNNK------------QQI 537

  Fly   624 ALS--------PRLKAPYIVFGPPGTGKTSTIVEAIYQLYINRPETHILVLAGSNTACD------ 674
            ||:        .::.||.:::||.|||||..:..|..:| .:|.:..:|:...:|::.|      
Zfish   538 ALNFILGKCEDDKVAAPLLIYGPFGTGKTLCLASAAKEL-AHRSQNKVLICTYTNSSADLYVREH 601

  Fly   675 --------EVALRLLRAIAKAPQSQPRPLTRIFSANCDRRIDNIDDLLLEY---SNMYTVHFYPA 728
                    ...|:|||..|....|               .|...||:..:|   |........||
Zfish   602 FHPYIINGHPTLKLLRIKANKGGS---------------AIIATDDITRKYCLCSRDGQSFILPA 651

  Fly   729 VQAVHQYRIVICTLSLAG-----KLSTGGFAANNVYTHVFVDEAAASTEAEVLMGITCTLSPTLN 788
            ...:..:||:|.|.|:|.     ||..|.|      ||:.:|||:...|.|.||.:......| .
Zfish   652 RSDLESHRIIITTTSIARHLHELKLPKGFF------THILIDEASQMLEGEALMALGLADKHT-R 709

  Fly   789 LILSGDHKQLGP----VLQSQRANEWGLGLTLFERLLQRKCYQVEEDGSYNASVQTRLI--RNFR 847
            ::|:|||.|:.|    |...:|:..     ||..||     :...:|.|.|.:.::|:|  .|:|
Zfish   710 VVLAGDHMQMAPKLFSVTDDKRSEH-----TLLNRL-----FHYYQDQSINIAKKSRIIFNENYR 764

  Fly   848 SHPEIVSLYNNMYY-------EGHLRTEAPMEIVCRFHNWFYLPNATFPIMFHSVFGT--TMNTK 903
            |..|||...:..:|       .|.:.....::                |::||.|.|.  ..:|.
Zfish   765 STTEIVDFVSTYFYVSDGIKARGDVHPHPRLK----------------PLIFHHVRGECHLSSTI 813

  Fly   904 SSVSLCNNKEIDVVMDYVKDL-----MYFGLNGEKLLQTDIGIISPYKNQYQRIQEQLNMRNWSQ 963
            :|.|..|..|::.|::.|:.|     |.:|....|    .|.::|. ..|...|:..|..:.:..
Zfish   814 TSTSWLNYAEVNSVVNMVQVLLTDWPMEWGDKDPK----QICVLSE-GQQVAAIRIHLRRKGFYG 873

  Fly   964 IDCGSVELFQGKEKHVIIVSFVR---------SFTPKLGFLNNERRLNVLLSRPISLLILIGNPR 1019
            :...::...|||:..|||::.|.         |..|:  |.::.|.||..|:|..||:::||:..
Zfish   874 VSVQNLANIQGKQFRVIIITTVHTRDKLLQLDSSCPE--FFDDIRALNTALTRAQSLVVVIGDAG 936

  Fly  1020 TLSQNSDFQHIIEMCRNRKTLVGEQYLNEDFITNKKTGANNVNKGGAAGDQPASGLRQPLKRKNH 1084
            .|           .|..:.:.|...|:.           :.::||..   :|....|..|:|:..
Zfish   937 AL-----------CCFGKCSKVWRAYIE-----------HCISKGSI---KPDHFTRDVLQREVL 976

  Fly  1085 AKNPVQDAKIFYSKNELLNLGNECQRKKSELETIFDELPKVPRSVDHDLDEVRSIEAQLKDFQLE 1149
            ..:..|..:.......::||       ::|.:.|..|:.      ::|.|..:|.:...:..::.
Zfish   977 EISKFQKTENVEKIETVVNL-------QAETDAILKEME------NYDSDAQKSDDDNEQKRRIF 1028

  Fly  1150 TKQDAAGTSILVTNAP 1165
            |..:......:|.|.|
Zfish  1029 TSAEKENLLEMVRNQP 1044

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG6701NP_001188923.1 TIGR00376 424..1037 CDD:273041 166/694 (24%)
AAA_19 618..687 CDD:289986 24/90 (27%)
AAA_12 812..1019 CDD:289832 57/231 (25%)
helz2bXP_699251.2 AAA_11 530..725 CDD:289831 63/229 (28%)
AAA 553..688 CDD:99707 40/156 (26%)
DNA2 <647..959 CDD:224037 91/373 (24%)
P-loop_NTPase <662..>721 CDD:304359 23/65 (35%)
UvrD_C_2 735..935 CDD:304668 57/227 (25%)
RNB 1255..1482 CDD:279157
RNB 1544..1845 CDD:214935
AAA_11 2289..2532 CDD:289831
AAA_19 2297..>2368 CDD:289986
AAA_12 2543..2746 CDD:289832
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
21.910

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