DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG6701 and Dna2

DIOPT Version :10

Sequence 1:NP_610920.3 Gene:CG6701 / 36550 FlyBaseID:FBgn0033889 Length:1333 Species:Drosophila melanogaster
Sequence 2:NP_796346.2 Gene:Dna2 / 327762 MGIID:2443732 Length:1062 Species:Mus musculus


Alignment Length:996 Identity:215/996 - (21%)
Similarity:379/996 - (38%) Gaps:283/996 - (28%)


- Green bases have known domain annotations that are detailed below.


  Fly   178 IEEYKLDTDVKPTLLKFQKRLLLQSDKDFELQSLGCYICQENFEKIEKYEEHVEYHGDESDFQSL 242
            ::|..|.|..:...||...||.|..|:      :.|.: :|......|:.|.....|..|:|..:
Mouse   180 LQELALQTLREVRHLKEMYRLNLSQDE------ILCEV-EEYLPSFSKWAEDFMRKGPSSEFPQM 237

  Fly   243 K-------KMKKYPTPI---VSLSYQTCVDSHYFG-------------------------FTLKT 272
            :       ..:..|..|   .||..:..:.|..||                         ..|||
Mouse   238 QLSLPSDGSNRSSPCNIEVVKSLDIEESIWSPRFGLKGKIDVTVGVKIHRDCKMKYKVMPLELKT 302

  Fly   273 --------FRKDLVVDKFIIVQLRQ-------FYYVYGAQMPLPVN--GSGELV----FFVDSHV 316
                    .|..:|:...:..:.|:       .|...|...|:|.|  ...||:    :...|.:
Mouse   303 GKESNSIEHRSQVVLYTLLSQERREDPEAGWLLYLKTGQMYPVPANHLDKRELLKLRNWLAASLL 367

  Fly   317 FMILREQPIVIGFTIQGEKYVEQHHFMRTEALP---------KASFNINPYRLSSKETFKSKGLP 372
            ..:.|..|        ||:       .|..|||         |....|....|.|: ..:.:| .
Mouse   368 HRVSRAAP--------GEE-------ARLSALPQIIEEEKTCKYCSQIGNCALYSR-AVEEQG-D 415

  Fly   373 PANPPIQVLSALKHEDAQMCLA-----------------SFDNQ--YQN-YCERGREITQE-NLT 416
            .|:.|..:||.::.|...:.||                 |.||:  :|: :.....|:.:. |..
Mouse   416 DASIPEAMLSKIQEETRHLQLAHLKYFSLWCLMLTLESQSKDNRKTHQSIWLTPASELEESGNCV 480

  Fly   417 GTLRTLLQVEDIERL---QHYLSLKQSEMELHQFGRELSVKMQMGTTSMSVED--ILSPGDDVLI 476
            |   .|::.|.:.|:   |:          ||.|.|:   ...|..|::...|  |||..:..|.
Mouse   481 G---NLVRTEPVSRVCDGQY----------LHNFQRK---NGPMPATNLMAGDRIILSGEERKLF 529

  Fly   477 INEKG----NPKSAVRKMLENNNNVLELALKDFDSILRWARNVDGMVGSLDKQPRVYFARILGVS 537
            ...||    ..|:||..:|:.|.:.|...     ::.|           ||::.|..     .:|
Mouse   530 ALSKGYVKKMNKAAVTCLLDRNLSTLPAT-----TVFR-----------LDREERHG-----DIS 573

  Fly   538 TQRVNITCERQLPDNTTYTLIFRPLRAVMRYQYRALQQLSFTRHSDVQRILFPGEIPNTPLASGV 602
            |...|::   :|.::|..:   :.||.:: ..:|..|.:::...      :.|.:..:|      
Mouse   574 TPLGNLS---KLMESTDPS---KRLRELI-IDFREPQFIAYLSS------VLPHDAKDT------ 619

  Fly   603 LQLNNKLISTNPEQMQAVRQIALSPRLKAPYIVFGPPGTGKTSTIVEAIYQLYINRPETHILVLA 667
              :.|.|...|..|.||::::.||   |...::.|.||||||:||. |:.:: ::.....:|:.:
Mouse   620 --VANILKGLNKPQRQAMKRVLLS---KDYTLIVGMPGTGKTTTIC-ALVRI-LSACGFSVLLTS 677

  Fly   668 GSNTACDEVALRLLRAIAKAPQSQPRPLTRIFSANCDRRIDNIDDLLLEYSNMYTVHFYPAVQAV 732
            .:::|.|.:.|:|.:                |...           .|.....:.||  |.:|..
Mouse   678 YTHSAVDNILLKLAK----------------FKVG-----------FLRLGQSHKVH--PDIQKF 713

  Fly   733 HQYRIV----ICTLSLAGKL-------STGGFAANN------VYTHVFVDEAAASTEAEVLMGIT 780
            .:..|.    |.:|:...:|       :|.....|:      .:....||||:..:: .|.:|  
Mouse   714 TEEEICRSRSIASLAHLEELYNSHPIVATTCMGINHPIFSRKTFDFCIVDEASQISQ-PVCLG-- 775

  Fly   781 CTLSPTLNLILSGDHKQLGPVLQSQRANEWGLGLTLFERLLQRKCYQVEEDGSYNASVQTRLIRN 845
             .|..:...:|.|||:||.|::.::.|...|:..:||:||            ..|.|...:|...
Mouse   776 -PLFFSRRFVLVGDHQQLPPLVVNREARALGMSESLFKRL------------ERNESAVVQLTVQ 827

  Fly   846 FRSHPEIVSLYNNMYYEGHLR--TEAPMEIVCRFHNWFYLPNATFPIMFHSVFGTT--------- 899
            :|.:.:|:||.|.:.|.|.|.  ::.....|....|   |.:|...:..::.:..:         
Mouse   828 YRMNRKIMSLSNKLTYAGKLECGSDRVANAVLALPN---LKDARLSLQLYADYSDSPWLAGVLEP 889

  Fly   900 ------MNTK--------SSVSLCNNKEIDVVMDYVKDLMYFGLNGEKLLQTDIGIISPYKNQYQ 950
                  :||.        .:..:.|..|..:::......:..|.:     .:|||:|:||:.|.:
Mouse   890 DNPVCFLNTDKVPAPEQVENGGVSNVTEARLIVFLTSTFIKAGCS-----PSDIGVIAPYRQQLR 949

  Fly   951 RIQEQLNMRNWSQIDCGSVELFQGKEKHVIIVSFVRSFTP-KLG-FLNNERRLNVLLSRPISLLI 1013
            .|.:.|...:...::..:|:.:||::|.:|:||||||... .|| .|.:.|||||.|:|....||
Mouse   950 IISDLLARSSVGMVEVNTVDKYQGRDKSLILVSFVRSNEDGTLGELLKDWRRLNVALTRAKHKLI 1014

  Fly  1014 LIGNPRTLSQ----NSDFQHI 1030
            |:|:..:|.:    .:.|.|:
Mouse  1015 LLGSVSSLKRFPPLGTLFDHL 1035

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG6701NP_610920.3 DEXXQc_Helz-like 611..847 CDD:350796 57/252 (23%)
SF1_C_Upf1 848..1035 CDD:350195 53/214 (25%)
Dna2NP_796346.2 Nuclease activity. /evidence=ECO:0000250 82..520 75/379 (20%)
DNA2_N-like 127..366 CDD:411722 36/192 (19%)
Helicase activity. /evidence=ECO:0000250 521..1062 139/615 (23%)
P-loop containing Nucleoside Triphosphate Hydrolases 572..>675 CDD:476819 30/128 (23%)
DEXXQc_DNA2 626..829 CDD:350799 57/252 (23%)
AAA_12 806..1020 CDD:463780 58/233 (25%)

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