DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG6701 and Dna2

DIOPT Version :9

Sequence 1:NP_001188923.1 Gene:CG6701 / 36550 FlyBaseID:FBgn0033889 Length:1333 Species:Drosophila melanogaster
Sequence 2:NP_796346.2 Gene:Dna2 / 327762 MGIID:2443732 Length:1062 Species:Mus musculus


Alignment Length:996 Identity:215/996 - (21%)
Similarity:379/996 - (38%) Gaps:283/996 - (28%)


- Green bases have known domain annotations that are detailed below.


  Fly   178 IEEYKLDTDVKPTLLKFQKRLLLQSDKDFELQSLGCYICQENFEKIEKYEEHVEYHGDESDFQSL 242
            ::|..|.|..:...||...||.|..|:      :.|.: :|......|:.|.....|..|:|..:
Mouse   180 LQELALQTLREVRHLKEMYRLNLSQDE------ILCEV-EEYLPSFSKWAEDFMRKGPSSEFPQM 237

  Fly   243 K-------KMKKYPTPI---VSLSYQTCVDSHYFG-------------------------FTLKT 272
            :       ..:..|..|   .||..:..:.|..||                         ..|||
Mouse   238 QLSLPSDGSNRSSPCNIEVVKSLDIEESIWSPRFGLKGKIDVTVGVKIHRDCKMKYKVMPLELKT 302

  Fly   273 --------FRKDLVVDKFIIVQLRQ-------FYYVYGAQMPLPVN--GSGELV----FFVDSHV 316
                    .|..:|:...:..:.|:       .|...|...|:|.|  ...||:    :...|.:
Mouse   303 GKESNSIEHRSQVVLYTLLSQERREDPEAGWLLYLKTGQMYPVPANHLDKRELLKLRNWLAASLL 367

  Fly   317 FMILREQPIVIGFTIQGEKYVEQHHFMRTEALP---------KASFNINPYRLSSKETFKSKGLP 372
            ..:.|..|        ||:       .|..|||         |....|....|.|: ..:.:| .
Mouse   368 HRVSRAAP--------GEE-------ARLSALPQIIEEEKTCKYCSQIGNCALYSR-AVEEQG-D 415

  Fly   373 PANPPIQVLSALKHEDAQMCLA-----------------SFDNQ--YQN-YCERGREITQE-NLT 416
            .|:.|..:||.::.|...:.||                 |.||:  :|: :.....|:.:. |..
Mouse   416 DASIPEAMLSKIQEETRHLQLAHLKYFSLWCLMLTLESQSKDNRKTHQSIWLTPASELEESGNCV 480

  Fly   417 GTLRTLLQVEDIERL---QHYLSLKQSEMELHQFGRELSVKMQMGTTSMSVED--ILSPGDDVLI 476
            |   .|::.|.:.|:   |:          ||.|.|:   ...|..|::...|  |||..:..|.
Mouse   481 G---NLVRTEPVSRVCDGQY----------LHNFQRK---NGPMPATNLMAGDRIILSGEERKLF 529

  Fly   477 INEKG----NPKSAVRKMLENNNNVLELALKDFDSILRWARNVDGMVGSLDKQPRVYFARILGVS 537
            ...||    ..|:||..:|:.|.:.|...     ::.|           ||::.|..     .:|
Mouse   530 ALSKGYVKKMNKAAVTCLLDRNLSTLPAT-----TVFR-----------LDREERHG-----DIS 573

  Fly   538 TQRVNITCERQLPDNTTYTLIFRPLRAVMRYQYRALQQLSFTRHSDVQRILFPGEIPNTPLASGV 602
            |...|::   :|.::|..:   :.||.:: ..:|..|.:::...      :.|.:..:|      
Mouse   574 TPLGNLS---KLMESTDPS---KRLRELI-IDFREPQFIAYLSS------VLPHDAKDT------ 619

  Fly   603 LQLNNKLISTNPEQMQAVRQIALSPRLKAPYIVFGPPGTGKTSTIVEAIYQLYINRPETHILVLA 667
              :.|.|...|..|.||::::.||   |...::.|.||||||:||. |:.:: ::.....:|:.:
Mouse   620 --VANILKGLNKPQRQAMKRVLLS---KDYTLIVGMPGTGKTTTIC-ALVRI-LSACGFSVLLTS 677

  Fly   668 GSNTACDEVALRLLRAIAKAPQSQPRPLTRIFSANCDRRIDNIDDLLLEYSNMYTVHFYPAVQAV 732
            .:::|.|.:.|:|.:                |...           .|.....:.||  |.:|..
Mouse   678 YTHSAVDNILLKLAK----------------FKVG-----------FLRLGQSHKVH--PDIQKF 713

  Fly   733 HQYRIV----ICTLSLAGKL-------STGGFAANN------VYTHVFVDEAAASTEAEVLMGIT 780
            .:..|.    |.:|:...:|       :|.....|:      .:....||||:..:: .|.:|  
Mouse   714 TEEEICRSRSIASLAHLEELYNSHPIVATTCMGINHPIFSRKTFDFCIVDEASQISQ-PVCLG-- 775

  Fly   781 CTLSPTLNLILSGDHKQLGPVLQSQRANEWGLGLTLFERLLQRKCYQVEEDGSYNASVQTRLIRN 845
             .|..:...:|.|||:||.|::.::.|...|:..:||:||            ..|.|...:|...
Mouse   776 -PLFFSRRFVLVGDHQQLPPLVVNREARALGMSESLFKRL------------ERNESAVVQLTVQ 827

  Fly   846 FRSHPEIVSLYNNMYYEGHLR--TEAPMEIVCRFHNWFYLPNATFPIMFHSVFGTT--------- 899
            :|.:.:|:||.|.:.|.|.|.  ::.....|....|   |.:|...:..::.:..:         
Mouse   828 YRMNRKIMSLSNKLTYAGKLECGSDRVANAVLALPN---LKDARLSLQLYADYSDSPWLAGVLEP 889

  Fly   900 ------MNTK--------SSVSLCNNKEIDVVMDYVKDLMYFGLNGEKLLQTDIGIISPYKNQYQ 950
                  :||.        .:..:.|..|..:::......:..|.:     .:|||:|:||:.|.:
Mouse   890 DNPVCFLNTDKVPAPEQVENGGVSNVTEARLIVFLTSTFIKAGCS-----PSDIGVIAPYRQQLR 949

  Fly   951 RIQEQLNMRNWSQIDCGSVELFQGKEKHVIIVSFVRSFTP-KLG-FLNNERRLNVLLSRPISLLI 1013
            .|.:.|...:...::..:|:.:||::|.:|:||||||... .|| .|.:.|||||.|:|....||
Mouse   950 IISDLLARSSVGMVEVNTVDKYQGRDKSLILVSFVRSNEDGTLGELLKDWRRLNVALTRAKHKLI 1014

  Fly  1014 LIGNPRTLSQ----NSDFQHI 1030
            |:|:..:|.:    .:.|.|:
Mouse  1015 LLGSVSSLKRFPPLGTLFDHL 1035

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG6701NP_001188923.1 TIGR00376 424..1037 CDD:273041 150/664 (23%)
AAA_19 618..687 CDD:289986 20/68 (29%)
AAA_12 812..1019 CDD:289832 58/233 (25%)
Dna2NP_796346.2 Dna2 72..283 CDD:285859 23/109 (21%)
Nuclease activity. /evidence=ECO:0000250 82..520 75/379 (20%)
Cas4_I-A_I-B_I-C_I-D_II-B <256..398 CDD:294426 28/156 (18%)
TIGR00376 472..1034 CDD:273041 153/677 (23%)
Helicase activity. /evidence=ECO:0000250 521..1062 139/615 (23%)
P-loop_NTPase 626..830 CDD:304359 57/253 (23%)
AAA_12 806..1020 CDD:289832 58/233 (25%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C167831392
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG1112
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
32.740

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