DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG6701 and CG2990

DIOPT Version :9

Sequence 1:NP_001188923.1 Gene:CG6701 / 36550 FlyBaseID:FBgn0033889 Length:1333 Species:Drosophila melanogaster
Sequence 2:NP_727386.1 Gene:CG2990 / 31934 FlyBaseID:FBgn0030170 Length:1100 Species:Drosophila melanogaster


Alignment Length:1209 Identity:237/1209 - (19%)
Similarity:437/1209 - (36%) Gaps:384/1209 - (31%)


- Green bases have known domain annotations that are detailed below.


  Fly    63 EMARLQVISAQTEWYVDKAKMRKLFEVHLNALPNSS--EIRQKLSSQG----------------A 109
            ::|.:..:.:.:...::..|.::...|.|..|||..  ::..|..|.|                .
  Fly    51 DLALIAAMDSISNHRLELTKWQRCEVVRLEQLPNRKGLKVHVKRISGGDPETADCQLLPPWNCMP 115

  Fly   110 TNIG---SLLHRTN-----FLINTPRG----NPNYRIKNFSLMD--FRKEKFNLLDEQHRLRGIA 160
            ..:|   |||.:.:     ::::..:|    :|::.|...::..  |.|.|..|   |.|.||:.
  Fly   116 MQVGDTVSLLGKWDPSAGCYVVDKEQGYCVSHPDFLISGTTVTGSLFCKRKSVL---QERFRGLD 177

  Fly   161 STTDVPGGAPAEGNKPIIEEYKLDTDVKPTLLKFQKRLL-----LQS--DKDFELQSLGCYICQE 218
            |           ||..::    :.|.|...|.|..::.|     :||  .:.....||...:...
  Fly   178 S-----------GNSVMV----IGTLVHELLQKVLRQKLFDKKHIQSALQEMLASSSLAHLLYAS 227

  Fly   219 NFEKIEKYEEHVEYHGDESDFQSLKKMKKYPTPIVSL---------------------SYQTC-- 260
            |..::| .|:|               :.|:..||||.                     .::.|  
  Fly   228 NLIQVE-MEDH---------------LMKFIDPIVSFVAQYVKGEPPSVLLPEVYRGQIHEICDI 276

  Fly   261 --------------VD-----------SHYFGFTLKTFRKDLVVD---KFIIVQLRQ-------- 289
                          ||           .......|||.|....::   :.::.||..        
  Fly   277 EENLWVPQLGLKGKVDVSVKVKNQRQREEIIPLELKTGRASFSMEHKGQLLLYQLMHSAQGRDTQ 341

  Fly   290 ---FYYVYGAQMPLPVNGSGE---LVFFVDSHVFMILREQPIVIGFTIQGEKYVEQ--------H 340
               ..|:....:....:|..|   |:...:...:.:.||    :......|..:||        |
  Fly   342 SGLLLYLKEGLLREVASGRNEQRDLLMLRNDLAYWLTRE----VAIPASKEDPLEQLPLPEPVYH 402

  Fly   341 HFMRTEALPKASFNINPYRLSSKETFKSKGLPPANPPIQVL-SALKHEDAQMCLASFDNQY-QNY 403
            |    .|....::|......:.|::  |..|..::|..::: ..|:|      |:..|:.| |::
  Fly   403 H----SACGNCAYNTICSSFAQKDS--SLQLSDSHPLKKLMPQLLEH------LSEADHAYVQHW 455

  Fly   404 CERGREITQENLTGT-LRTLLQVEDIERLQHYLSLKQSEMELHQFGRELSVKMQMGTTSMSVEDI 467
            |.......|.|...: :|:....:..||.:..::::..::          ||.|        |.|
  Fly   456 CGLLALEEQHNRQSSHVRSFWTKDPAEREKEGIAIRHLKL----------VKGQ--------EVI 502

  Fly   468 LSPG--DDVLIINEKGNPKSAVRKMLENNNNVLELALKDFDSILRWARNVDGMVGSLDKQPRVYF 530
            |..|  ...|.:.|:.:|..             :|:|..||.         |....:....|:..
  Fly   503 LEEGRYRQTLELGEEADPSR-------------DLSLSGFDL---------GEYVVISSTSRLAV 545

  Fly   531 AR--ILGVSTQRVNITCERQLPDN-TTYTLIFRPLRAVMRYQYRALQQLSFT----------RHS 582
            |.  |:.:..:|:::..||.|... :..|.|      :.::..::....:||          |..
  Fly   546 AAGFIVSIEARRLDLRLERDLSQRYSEETFI------IDKHDSQSFATFNFTNLGMLLSEGERFQ 604

  Fly   583 DVQRILF---PGE----IPNTPLASGV-LQLN-NKLISTNPEQMQAVRQIALSPRLKAPYIVFGP 638
            :::.|:.   |.|    :|...|..|. :.|| ||:     :|..|:|.:..|..|    ::.|.
  Fly   605 ELRDIIVAKKPPEQHKVLPKIILTKGAPILLNLNKV-----QQNAALRALTTSSHL----LIKGL 660

  Fly   639 PGTGKTSTIVEAIYQLYINRPETHILVLAGSNTACDEVALRLLRAIAKAPQSQP--RPLTRIFS- 700
            ||||||.|:|..:..|::....  :|:.|.:::|.|.:.:|||          |  .|:.|:.| 
  Fly   661 PGTGKTQTLVALVRLLHLLGKS--VLITAQTHSAVDNLIMRLL----------PFGLPMMRLGSG 713

  Fly   701 ANCDRRIDNIDDLLLEYSNMYTVHFYPAVQAVHQYRIVICTLSLAGKLSTG---GFAANNVYTHV 762
            :...::::.|.:..|...          .:.|.:....:...|:.|....|   .......:.:.
  Fly   714 SRIHKQLEEISEERLTKD----------CKTVEELEKALGQPSIVGVTCLGCGHPLFQRRQFDYC 768

  Fly   763 FVDEAAASTEAEVLMG-ITCTLSPTLNLILSGDHKQLGPVLQSQRANEWGLGLTLFERLLQRKCY 826
            .||||....:..||.. |.|:     ..:|.||.:||.|:::|:.|.:.|...|||:||...|..
  Fly   769 IVDEATQVLQPTVLRPLIHCS-----KFVLVGDPEQLPPIVRSKEARQRGADETLFQRLDSEKAT 828

  Fly   827 QVEEDGSYNASVQTRLIRNFRSHPEIVSLYNNMYYEGHLRTEA--------PMEIVCRFHNWF-- 881
            .|             |...:|.:..|..|.|.:.|.|.|:..:        .:|::.....|.  
  Fly   829 AV-------------LSLQYRMNKTITRLANELTYGGDLKCASDEVSGARFEVELLNEAPRWVQR 880

  Fly   882 ----YLPNATFPIMFHSVFGTTMNTKSSVSLC--------------------------------- 909
                :|..|.          |.:||...:..|                                 
  Fly   881 ALTTHLEQAV----------TLINTGDCLERCQEFVYASQRLVDTCSSIEQSFSEDKDEIRKLTS 935

  Fly   910 --------NNKEIDVVMDYVKDLMYFGLNGEKLLQTDIGIISPYKNQ---YQRIQEQLNMRNWSQ 963
                    |..|..:||..::.|:..|....:     ||:|:||:.|   ::::..:|:    :.
  Fly   936 KKRVSKYTNYCEAGIVMHLLRYLLKSGYEASR-----IGVIAPYRAQVELFKKLASKLD----TD 991

  Fly   964 IDCGSVELFQGKEKHVIIVSFVRS---FTP-----KLGFLNNERRLNVLLSRPISLLILIGNPRT 1020
            ::|.:|:.|||::|::||.|..::   |:.     :...|.::|||.|.::|..:.|||:|:.:.
  Fly   992 LECNTVDQFQGRDKNLIIYSCSKTGGDFSDMERSREAEILEDQRRLTVAITRAKNKLILLGDIKC 1056

  Fly  1021 LSQNSD----FQHIIEMCRNR----KTLVGEQYLNEDFI 1051
            |.|...    |:||.:.||.:    :...|.|.:.||.:
  Fly  1057 LEQYGPFRQLFKHIPDRCRLKLEEGRMEFGWQRIQEDLV 1095

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG6701NP_001188923.1 TIGR00376 424..1037 CDD:273041 151/713 (21%)
AAA_19 618..687 CDD:289986 21/68 (31%)
AAA_12 812..1019 CDD:289832 56/272 (21%)
CG2990NP_727386.1 Dna2 99..297 CDD:285859 39/231 (17%)
Cas4_I-A_I-B_I-C_I-D_II-B <283..415 CDD:294426 21/139 (15%)
TIGR00376 480..1069 CDD:273041 147/702 (21%)
P-loop_NTPase 636..859 CDD:304359 67/271 (25%)
AAA_12 815..1055 CDD:289832 56/271 (21%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C45438975
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG1112
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
32.740

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