DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG6701 and Zgrf1

DIOPT Version :9

Sequence 1:NP_001188923.1 Gene:CG6701 / 36550 FlyBaseID:FBgn0033889 Length:1333 Species:Drosophila melanogaster
Sequence 2:XP_006233356.1 Gene:Zgrf1 / 310880 RGDID:1305834 Length:2031 Species:Rattus norvegicus


Alignment Length:1094 Identity:243/1094 - (22%)
Similarity:390/1094 - (35%) Gaps:343/1094 - (31%)


- Green bases have known domain annotations that are detailed below.


  Fly   184 DTDVKPTLLKFQKRLLLQSDKDFELQSL------------------------------GCYI--- 215
            ::.|.|..|:..|.:|.|..:||..|.|                              .|.:   
  Rat  1123 ESSVDPVHLQMIKGMLYQQQQDFTSQDLVSRQKALSLNLNQTSRTGELRTALGSSASSNCRVRDG 1187

  Fly   216 --------CQENFEKI-EKYEEHVEYHGDESDFQSLKKMKKYPTPIVSLSYQTCVDSH----YFG 267
                    |..|.:|| ..|....:.| ..:.|||....::.        :.:.:..|    .||
  Rat  1188 QEINNSDLCFPNGQKILSAYLPQRQVH-IPAVFQSPAHYRQI--------FTSSIIEHLNILLFG 1243

  Fly   268 FTLKTFRKDLVVDKFIIVQLRQFYYVYGAQMPLPVNGSGELVFFVDSHVFMILREQPIV--IGFT 330
            ...:.::....||.......:      |..|....|.|........:.:.|:.:|.|..  :.:|
  Rat  1244 LAQRLYKALSKVDISFYTSSK------GEMMKSGKNNSPSCHHNQPAKLVMVKKEGPNKGRLFYT 1302

  Fly   331 IQGEKYVEQHHFMRTEALPKASFNINPYRLSSKET--------FKSKGLPPANPPIQVLSALKHE 387
            ....|..:...|...|       ::.|.:||..|:        .||.|....:..|.|     :|
  Rat  1303 CDKPKGNQCKFFKWLE-------DVTPEQLSQNESQPNMIFNDIKSIGSYLRSQKIAV-----YE 1355

  Fly   388 DAQMCL-ASFDNQYQNYCERGREITQENLTGTLRTLLQVEDIERLQHYLSLKQSEMELHQFGREL 451
            :.|:.| ..||.|.:.:             |.|:.|..|..                  :|..|.
  Rat  1356 ECQLLLRKGFDFQKKQH-------------GKLKKLATVNP------------------EFYSET 1389

  Fly   452 SVKMQMGTTSMSVEDILSPGD------------DVLIINEKGNPKSAVRKMLENNNNVLELALKD 504
            ..|:.:..:......:.|.||            |..|........|:|       |.|..|.||.
  Rat  1390 KSKLYLKLSRKESSSVYSKGDLWVISKTLDFELDTFIACSAFFGPSSV-------NEVELLPLKG 1447

  Fly   505 -FDSILRWARNVDGMVGSLDKQPRVYFARILGVSTQRVNITCERQLPDNTTYTLIFRPLRAVMRY 568
             |.|  .|..|:           .|:...:..|||:   :|..:.:.|      .|.|....:..
  Rat  1448 YFPS--NWPTNI-----------TVHALLVCNVSTE---LTMLQNIQD------YFNPATLPLMP 1490

  Fly   569 QYRALQQLSFTRHSDVQRILFPGEIPNTPLASGV------------LQLNNKLIST---NPEQMQ 618
            ...|:.|.:.....:|.:..|   ||  |..:.:            |||..:||:.   |.:|..
  Rat  1491 YLLAMSQSATVSSKNVSKRKF---IP--PAITSIKTKFELLHLGATLQLARELINVHRLNNDQAS 1550

  Fly   619 AVRQIALSPRLKA-------PY-------IVFGPPGTGKT---STIVEAIYQLYIN--------- 657
            |:.|||.....:.       |:       ::.|..|.||:   :.::..:.:|:..         
  Rat  1551 ALMQIAQMMASRGSDEDALEPFSHSLPITVIHGVFGAGKSYLLAVVILFLVELFEKCDSEAVGRA 1615

  Fly   658 RPETHILVLAGSNTACDEVALRLL-------------RAIAK--APQSQPRPLTRIFSANCDRRI 707
            || ..:|:.:.:|.|.|.|.|.||             |.|||  .|.|        ..|:.|...
  Rat  1616 RP-WKLLISSSTNVAVDRVLLGLLSLGFEKFIRVGSVRKIAKPVLPYS--------LHASSDNES 1671

  Fly   708 DNIDDL--LL--EYSNMYTVHFYPAVQ---------AVHQYRIVICTLSLAGKLSTGGFAANN-- 757
            :.:.:|  |:  |.:.:..|:...:::         .:.|.|:|..|.:..      .|...|  
  Rat  1672 EQLKELHALMREELTPIERVYVRKSIEQHKLGTNRVLLKQARVVGITCAAC------PFPCMNDL 1730

  Fly   758 VYTHVFVDEAAASTEAEVLMGIT---CTLSPTLNLILSGDHKQLGPVLQ-SQRANEWGLGLTLFE 818
            .:..|.:||.:..||...|:.|.   |.     .|||.||.|||.|.:| |..|:..||..|||:
  Rat  1731 KFPVVVLDECSQMTEPASLLPIARFECE-----KLILVGDPKQLPPTIQGSDAAHGNGLEQTLFD 1790

  Fly   819 RLLQRKCYQVEEDGSYNASVQTRLIRNFRSHPEIVSLYNNMYYEGHL------RTEAPMEIVCRF 877
            ||    |....:      .:|.|  ..:|.||.|.::.|:::|||:|      |..:|:      
  Rat  1791 RL----CLMGHK------PIQLR--TQYRCHPVISAIANDLFYEGNLVNGISERERSPV------ 1837

  Fly   878 HNWFYLPNATFPIMFHSVFGTTMNTKSSVSLCNNKEIDVVMDYVKDLMYFGLNGEKLLQTDIGII 942
            ..|  ||.    :.|::|.||....:.: |..|..|....:..::.|:..||.|..     ||:|
  Rat  1838 LEW--LPT----LCFYNVTGTEQVEREN-SFVNVAEAAFTLKLIRSLIASGLEGSM-----IGVI 1890

  Fly   943 SPYKNQYQRIQEQLNMRNWSQIDCGSVEL-----FQGKEKHVIIVSFVRSFTPKLGFLNNERRLN 1002
            :.||:|..:|...|:..:....|..:||:     |||.||.:||:|.||  |.::||:::|:|:|
  Rat  1891 TLYKSQMYKICSLLSAVDVDHPDVKAVEVSTVDAFQGAEKEIIILSCVR--TRQVGFIDSEKRMN 1953

  Fly  1003 VLLSRPISLLILIGNPRTLSQNSDFQHIIEMCRNRKTLVGEQYLNEDFITNKKTGANNVNKGGAA 1067
            |.|:|....|::||:...|.:|..:..:|:.|:.|          ||                  
  Rat  1954 VALTRGRRHLLIIGSLSCLRKNQLWGRVIQHCKGR----------ED------------------ 1990

  Fly  1068 GDQPASGLRQPLKRKNHAKNPVQDAKIFYSKNELLNLGNECQRKKSELETIFDE 1121
            |.|.||.....|.|               ...|.|....|.::||:|.|.:.|:
  Rat  1991 GLQHASQCEPQLDR---------------LLKEYLEKQAEEKQKKTEKEKLKDK 2029

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG6701NP_001188923.1 TIGR00376 424..1037 CDD:273041 172/711 (24%)
AAA_19 618..687 CDD:289986 24/109 (22%)
AAA_12 812..1019 CDD:289832 67/217 (31%)
Zgrf1XP_006233356.1 DUF2439 3..75 CDD:402138
zf-GRF 1276..1320 CDD:399670 7/50 (14%)
DEAD-like_helicase_N 1543..1807 CDD:421690 70/295 (24%)
AAA_12 1784..1968 CDD:404073 66/215 (31%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C166335129
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG1112
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
21.830

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