DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG6701 and Helz2

DIOPT Version :9

Sequence 1:NP_001188923.1 Gene:CG6701 / 36550 FlyBaseID:FBgn0033889 Length:1333 Species:Drosophila melanogaster
Sequence 2:XP_006500664.1 Gene:Helz2 / 229003 MGIID:2385169 Length:2970 Species:Mus musculus


Alignment Length:1270 Identity:259/1270 - (20%)
Similarity:438/1270 - (34%) Gaps:366/1270 - (28%)


- Green bases have known domain annotations that are detailed below.


  Fly   211 LGCYICQENFEKIEKYEEHVE--YHGDESDF------------QSLKKMKKYPTPIVSLSYQTCV 261
            |.|:.|.......|.:|.|..  .|.....|            ..|.|....|.|.:....:.|:
Mouse   287 LYCHACLVTCNSQEAFENHCSSLEHAQMVAFDQAVPWKHRAPPMGLSKFDLCPRPDLCEHGEVCI 351

  Fly   262 DSH-----------------------------YFGFTLKTFRKDLVVDKFIIVQLRQFYYVYGAQ 297
            .:|                             |....|..:::.   .|.:.|.......|....
Mouse   352 KAHSKQELQEWVQRAQDMELREQAAWQDGLVPYQARLLAEYQRS---SKEVSVMAETIRGVSVTC 413

  Fly   298 MPLPVNGSGELVFFVDSH--VFMILREQPIVIGFTIQGEKYVEQHHFMRTEALPKASFNINPYRL 360
            .|.||:.:.|.:    .|  ||.|..|.|::              |.......|.|:|::     
Mouse   414 HPPPVHQAQEKI----QHQWVFTIHSEDPLL--------------HVALLNQEPGAAFSL----- 455

  Fly   361 SSKETFKSKGLPPANPPIQVLSALKHEDAQMCLASFDNQYQNYCERGREITQENLTGTLRTLLQV 425
                      :.|:.||.|:.:..||    .|:.|...||:                 :..|:|.
Mouse   456 ----------VAPSLPPHQLYAQGKH----FCVQSSPAQYK-----------------VGVLVQA 489

  Fly   426 EDIERLQHYLSLKQSEMELHQFGRE----LSVKMQMGTT-------------------------S 461
            ......:.::        :..|||.    ..:|:|:|.|                         .
Mouse   490 VAFGSFEQWV--------VFDFGRRPVLLQKLKLQLGQTHSQGLNGKPAPSHPQELECWHTGNRH 546

  Fly   462 MSVEDILSPGDDVLIINEK--------------------GNPKSAVRKML-----ENNNNVLELA 501
            :.:|...:|..:.|:...|                    .|.:..:.|.|     .....|.:||
Mouse   547 VVLEVDWTPEQEALMAKYKLPSLALEFNQIVPDWGPISRSNYRQRMHKFLYEEEAAQQQLVAKLA 611

  Fly   502 LKDFDSILRWARNVDGMVGSLDKQPRVYFARI-----------------LGVSTQRVNITCERQL 549
            :|...| |:.|.....: |.|...|...:|::                 ..|||.   :......
Mouse   612 MKGQVS-LKTALETPAL-GMLFAPPGALYAKVPFHSSLLPDTDQGFLLSRAVSTA---LVAPVPA 671

  Fly   550 PDNTTYTL-------------IFRPLRAVM-----------------------RYQYRALQQLSF 578
            |::|.|.:             :..|.|..|                       |:.::|:..| .
Mouse   672 PNSTVYQVRLEARASSDHALWLLLPARCCMALGLQAQDSPILEVQFQIDPMTFRFWHQAVDAL-L 735

  Fly   579 TRH---SDVQRILFPGEIPNTPLASGVLQLNNKLISTNPEQMQAVRQIA----LSPRLKAPYIVF 636
            ..|   .|:.....|...|..|...|           |.:|..||..||    ...:...|.:::
Mouse   736 EEHLVVPDLPACTLPHPWPTPPSFRG-----------NHKQKLAVGLIAGRRPEGTKHIPPLLIY 789

  Fly   637 GPPGTGKTSTIVEAIYQLYINRPETHILVLAGSNTACDEVALRLLRAIAKAPQSQPRPLTRIFSA 701
            ||.|||||.|:..|..:: :.:|.|.:|:...:|:|.|............:...:..||..::: 
Mouse   790 GPFGTGKTYTLAMAALEV-VQQPHTKVLICTHTNSAADIYIREYFHDYVSSGHPEATPLRVMYA- 852

  Fly   702 NCDRRIDNIDDLLLEYSNMYTVH--FYPAV--QAVHQYRIVICTLSLAGKLST-GGFAANNVYTH 761
              ||.....|...|:|..:....  |.|..  :.|| :|:|:.|.|.|.:|.. .||     ::|
Mouse   853 --DRPPRQTDPTTLQYCCLTEDRQAFRPPTGPELVH-HRLVVTTTSQARELQVPAGF-----FSH 909

  Fly   762 VFVDEAAASTEAEVLMGITCTLSPTLNLILSGDHKQLGPVLQSQRANEWGLGLTLFERLLQRKCY 826
            :|:||||...|.|.|:.::..||.| .::|:|||.|:.|.|.|...:: ....||..||.  ..|
Mouse   910 IFIDEAAQMLECEALIPLSYALSLT-RVVLAGDHMQVTPRLFSVPRDK-SARHTLLHRLF--LYY 970

  Fly   827 QVEEDGSYNASVQTRLI--RNFRSHPEIVSLYNNMYYEGHLRTEAPMEIVCRF--HNWFYLPNAT 887
            |.|   ::..:.|:|:|  .|:||...|::..::.:|   |....|::...:.  |...|     
Mouse   971 QQE---AHKIAQQSRIIFHENYRSTAAIINFVSHHFY---LAKGNPIQASGKVPRHPQHY----- 1024

  Fly   888 FPIMFHSVFGTTMNTKSSVSLCNNKEIDVVMDYVKDLM-----YFGLNGEKLLQTDIGIISPYKN 947
             |:||..|.|:.....|..|..|:.|:..|::.|:::.     .:|...    |..|..:| :..
Mouse  1025 -PLMFCHVAGSPEQDMSMTSWLNSAEVTQVVEKVREIYNTWPHCWGPRE----QRHICAVS-HGA 1083

  Fly   948 QYQRIQEQLNMRNWSQIDCGSVELFQGKEKHVIIVSFVRS-------FTPKLGFLNNERRLNVLL 1005
            |...::::|..||..::..||.|:..|:|..|:::|.|.:       ..|...|....|.||.::
Mouse  1084 QVSALRQELRRRNLGEVSVGSFEILPGREFRVVVLSSVHNRNSLLSPGAPTSEFFTEPRVLNTVM 1148

  Fly  1006 SRPISLLILIGNPRTLSQNSDFQHI----IEMCRNRKTLVGEQYLNEDF------------ITNK 1054
            :|..|.|:.:|:...|..:...:::    |..|....:...|:...|..            :|.|
Mouse  1149 TRAQSQLVAVGDAVALCSSGACRNLWRSFIRECIEHHSAFPEELSLEQIEQGVAQRQNWASLTLK 1213

  Fly  1055 KTGANNVNKGGAAGDQP--ASGLRQPLKRKNHAKNPVQDAKIFYSKNELLNLGNECQR-KKSELE 1116
            ..|.....|..|.|.|.  |.|....:|.:..|:...:......:..:..: ||...| ..:|:.
Mouse  1214 ARGPETEQKSMAQGPQRLIAEGTMVTVKAETRAEAAAKAQTAAVAAEDTAS-GNSASRDAAAEVS 1277

  Fly  1117 TIFDELPKVPRSVDHDLD------EVRSIEAQLKDFQLETKQDAAGT-------SILVTNAPVTN 1168
            |:...:.:    .|.:.|      |:.:.:|.||:. |:..|....|       ..:|.:|| ..
Mouse  1278 TLEGGMSE----EDSESDFWPSDWELNADDAILKEL-LDESQQVTVTVREDGLLDTVVCSAP-QK 1336

  Fly  1169 AAAPSVIPRAGLMKQETPALHSSS--VSRPAIRKPTVSAATPVAKSRSPMPEIPSSSKHPISMSS 1231
            |...:.:|.:.|.|    .|.|:|  ..|.:..:.|...|.     .:|:.::.||   ||.:..
Mouse  1337 AREYTNLPSSVLWK----FLRSNSKQFRRCSFLQETFERAL-----ATPLDDMASS---PIQVRG 1389

  Fly  1232 ------------------NPLSTNTERCVNGVLCG 1248
                              .|  ...:|||.|.|.|
Mouse  1390 RLNCGMAFTGDEVLVQILGP--AGDDRCVPGSLQG 1422

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG6701NP_001188923.1 TIGR00376 424..1037 CDD:273041 163/751 (22%)
AAA_19 618..687 CDD:289986 20/72 (28%)
AAA_12 812..1019 CDD:289832 55/222 (25%)
Helz2XP_006500664.1 DEAD-like_helicase_N 760..990 CDD:391939 73/257 (28%)
AAA_12 961..1161 CDD:372468 55/218 (25%)
RNB 1567..1924 CDD:214935
DEXXc_HELZ2-C 2448..2724 CDD:350798
AAA_12 2704..2909 CDD:372468
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG1112
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
21.810

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