DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG6701 and Ighmbp2

DIOPT Version :9

Sequence 1:NP_001188923.1 Gene:CG6701 / 36550 FlyBaseID:FBgn0033889 Length:1333 Species:Drosophila melanogaster
Sequence 2:NP_033238.2 Gene:Ighmbp2 / 20589 MGIID:99954 Length:993 Species:Mus musculus


Alignment Length:913 Identity:199/913 - (21%)
Similarity:349/913 - (38%) Gaps:210/913 - (23%)


- Green bases have known domain annotations that are detailed below.


  Fly   405 ERGREITQENLTGTLRTLLQVEDIERLQH----YLSLKQSEMELHQFGRELSV--KMQMGTTSMS 463
            ||..|:.:.      |:..:...:..||.    .|.|:.|......:|:.|..  ..:.|...:.
Mouse    20 ERDAEVEER------RSWQEHSSLRELQSRGVCLLKLQVSSQRTGLYGQRLVTFEPRKFGPAVVL 78

  Fly   464 VEDILSPGDDVLIINEKGNPKSAVRKMLENNNNVLELALKDFDSILRWARNVDGMVGSLDKQPRV 528
            ..:..:.||.|.:.:...|.:.|...:.......:.:|   ||.......|:|        :...
Mouse    79 PSNSFTSGDIVGLYDTNENSQLATGVLTRITQKSVTVA---FDESHDLQLNLD--------RENT 132

  Fly   529 YFARILGVSTQRVNITCERQLPDNTTYTLIFRPLRAVMRYQYRALQQLSFTRH----SDVQRILF 589
            |  |:|             :|.::.||..:.:.|..:.:|            |    |.:..||.
Mouse   133 Y--RLL-------------KLANDVTYKRLKKALMTLKKY------------HSGPASSLIDILL 170

  Fly   590 PGEIPNTPLASGVLQLNNKLISTNPEQMQAVRQIALSPRLKAPYIVFGPPGTGKTSTIVEAIYQL 654
            ....|:..:....|...|..:..:  |.:|| ..||:.:..|  |:.||||||||:|:||.|.|.
Mouse   171 GSSTPSPAMEIPPLSFYNTTLDLS--QKEAV-SFALAQKELA--IIHGPPGTGKTTTVVEIILQA 230

  Fly   655 YINRPETHILVLAGSNTACDEVALRL-------LR------------------AIAKAPQSQ--- 691
            .  :....:|..|.||.|.|.:..||       ||                  .:|::..:|   
Mouse   231 V--KQGLKVLCCAPSNIAVDNLVERLALCKKRILRLGHPARLLESVQHHSLDAVLARSDNAQIVA 293

  Fly   692 --PRPLTRIFSAN---CDRRIDN--IDDLLLEYSNMYTVHFYPAVQAVHQYRIVICTLSLAGKLS 749
              .|.:.::|..|   .|:|...  ..::.|....:........||::....:|:.|.:.|....
Mouse   294 DIRRDIDQVFGKNKKTQDKREKGNFRSEIKLLRKELKEREEAAIVQSLTAADVVLATNTGASSDG 358

  Fly   750 TGGFAANNVYTHVFVDEAAASTEAEVLMGITCTLSPTL---NLILSGDHKQLGPVLQSQRANEWG 811
            .......:.:..|.|||.|.:.||      :|.: |.|   ..||:|||:||.|...|.||...|
Mouse   359 PLKLLPEDYFDVVVVDECAQALEA------SCWI-PLLKAPKCILAGDHRQLPPTTVSHRAALAG 416

  Fly   812 LGLTLFERLLQRKCYQVEEDGSYNASVQTRLIRNFRSHPEIVSLYNNMYYEGHLRTEAPMEIVCR 876
            |..:|.|||.::          :.|.|...|...:|.|..|:...:...|.|.|.:...:    .
Mouse   417 LSRSLMERLAEK----------HGAGVVRMLTVQYRMHQAIMCWASEAMYHGQLTSHPSV----A 467

  Fly   877 FHNWFYLPNAT------FPIMFHSVFG---TTMNTKSSVSLCNNKEIDVVMDYVKDLMYFGLNGE 932
            .|....||..|      .|::.....|   ..:..:.|.|..|..|:.:|..:::.|:..|:.. 
Mouse   468 GHLLKDLPGVTDTEETRVPLLLIDTAGCGLLELEEEDSQSKGNPGEVRLVTLHIQALVDAGVQA- 531

  Fly   933 KLLQTDIGIISPYKNQYQRIQEQLNMRNWSQIDCGSVELFQGKEKHVIIVSFVRSFTP-KLGFLN 996
                .||.:|:||..|...:::.|:.:: .:::..||:.|||:||..::::||||... ::|||.
Mouse   532 ----GDIAVIAPYNLQVDLLRQSLSNKH-PELEIKSVDGFQGREKEAVLLTFVRSNRKGEVGFLA 591

  Fly   997 NERRLNVLLSRPISLLILIGNPRTLSQNSDFQHIIE-MCRNRKTLVGEQYLN----EDFITNKKT 1056
            .:||:||.::|....:.:|.:..|::.::..:.::: ...:.:.....:||:    |::......
Mouse   592 EDRRINVAVTRARRHVAVICDSHTVNNHAFLKTLVDYFTEHGEVRTAFEYLDDIVPENYTHEGSQ 656

  Fly  1057 GANNVNKGGAAGDQPASGLRQPL----------------KRKNHAKNPVQDAKIFYSKNELLNLG 1105
            |.:.|.|...    |::.:|:|.                :||...|.|....:..:|.:     .
Mouse   657 GHSRVPKPKC----PSTSIRKPASDQESGQETRAAPRHGRRKPSEKPPGSHVQSQHSSS-----A 712

  Fly  1106 NECQR--------------------KKSELETIFDELPKVPRSV-DHDLDEVRSIEAQLKDFQLE 1149
            |...|                    |:|:||        .|.|: .||...|..:   .::|.|.
Mouse   713 NGSDRTGGPDRTEHFRATIEEFVASKESQLE--------FPTSLSSHDRLRVHQL---AEEFGLR 766

  Fly  1150 TKQDAAGTSILVTNAPVTNAAAPSVIPRAGLMKQETPALHSSSVSRPAIRKPTVSAATPVAKSRS 1214
            ......|.:..:|.:..:.|::.||.|:            .||...||..:|...|..||...::
Mouse   767 HDSTGEGKARHITVSRRSPASSGSVAPQ------------PSSPPSPAQAEPEPRAEEPVTVVQA 819

  Fly  1215 PMP 1217
            ..|
Mouse   820 HCP 822

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG6701NP_001188923.1 TIGR00376 424..1037 CDD:273041 153/671 (23%)
AAA_19 618..687 CDD:289986 30/93 (32%)
AAA_12 812..1019 CDD:289832 54/216 (25%)
Ighmbp2NP_033238.2 TIGR00376 19..640 CDD:273041 157/697 (23%)
AAA_19 197..255 CDD:289986 26/62 (42%)
AAA_12 417..613 CDD:289832 54/215 (25%)
SS DNA-binding. /evidence=ECO:0000250 637..783 29/165 (18%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 650..723 13/81 (16%)
R3H_Smubp-2_like 724..782 CDD:100070 13/68 (19%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 765..815 14/61 (23%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 837..872
Nuclear localization signal. /evidence=ECO:0000255 862..866
ZnF_AN1 895..935 CDD:197545
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 953..993
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG1112
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
21.810

Return to query results.
Submit another query.