DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG6701 and C44H9.4

DIOPT Version :9

Sequence 1:NP_001188923.1 Gene:CG6701 / 36550 FlyBaseID:FBgn0033889 Length:1333 Species:Drosophila melanogaster
Sequence 2:NP_506213.2 Gene:C44H9.4 / 179760 WormBaseID:WBGene00008099 Length:1099 Species:Caenorhabditis elegans


Alignment Length:1270 Identity:261/1270 - (20%)
Similarity:419/1270 - (32%) Gaps:396/1270 - (31%)


- Green bases have known domain annotations that are detailed below.


  Fly    21 FPTPPPTPPINAGIKPPGTYANGMPRKPTVPWERELMGSFLLEMARLQVISAQTEWY----VDKA 81
            ||...||..:.:      :|.|...|:.....|.::.......:|.::  |:||..|    |..:
 Worm    13 FPPSEPTREVQS------SYNNSYYRRDYEEEEDDVQQYHTSHIASIK--SSQTTSYRSSVVQNS 69

  Fly    82 KM--RKLFEVHLNAL------PNSSEIRQK----LSSQGATNIGSLLH--RTNFLINTPRGNPNY 132
            .:  |...|...||.      |..:..|||    :.|:....:.|..|  ..||...|....||:
 Worm    70 SVYSRTFSEKEQNAFSKFYVQPPETNSRQKKKTEIESEVEKELKSYKHSDAINFAARTFSWGPNF 134

  Fly   133 RIKNFSLMDFRKEKFNLLDEQHRLRGIASTTDVPGGAPAEGNKPIIEEYKLDTDVKPTLLKFQKR 197
            ....      .::.|..:......|||.:...|   ..||.||.|             |:.....
 Worm   135 NSPK------PRQVFRDISTYSYERGIRAYFRV---LSAEDNKYI-------------LIACHAN 177

  Fly   198 L--LLQSDKDFELQSLGCYICQENFEKIEKYEEHVE-----YHGDESDFQSLKKMKKYPT---PI 252
            |  |.:.|..|         .:.|...|.|..|:..     :.||......|.|....|:   .|
 Worm   178 LHGLHRGDLRF---------VEVNDRTITKGSENYSVIGMLFPGDVVAVTELSKKSNAPSIAPTI 233

  Fly   253 VSLS-YQTCVDSHYFGFTLKTFRKDLVVDKFIIVQLRQFYYVYGAQMPLPVNGSGELVFFVDSHV 316
            .::| :..|:               ..|:|.:::|                              
 Worm   234 KNVSPHDPCI---------------WEVNKMVVLQ------------------------------ 253

  Fly   317 FMILREQPIVIGFTI--QGEKYVEQHHFMRTEALPKASFNINPYRLSSKETFKSKGLPPANPPIQ 379
                |:..|.:.|.:  .|...||.|    |||:.  ...|:..:|.:...:......|....::
 Worm   254 ----RKSIIRVNFAMLNNGAAIVEGH----TEAMD--VIEIDRKKLKTDMMYYGTAFIPEKSKVK 308

  Fly   380 VLSAL--KHEDAQMCLASFDNQYQNYCERGREITQENLTGTLRTLLQVEDIERLQHYLSLKQSEM 442
            .....  :|.:..|.|.|....|            .|..||:.|           |.|..:|:.|
 Worm   309 FSEGFHRQHWEDLMALTSKLPSY------------SNSLGTIYT-----------HSLCERQTNM 350

  Fly   443 ----------ELHQFGRELSVKMQMGTTSM--SVEDILSPGD------DVLIINEKG-------- 481
                      .::....|.||.:......|  |....:|.|.      .:..|:.|.        
 Worm   351 FKIGVDAFNSSIYSLNTEASVLVAQKCVIMGSSAAQTVSNGRFDGRNFQMTNIHRKSQNFRFSID 415

  Fly   482 NPKSAVRKMLENNNNVLELALKDFDSILRWARNVDGMVGSLDKQPRVYFARILGVSTQRVNITCE 546
            ||.....:...|.|..:|               ::|...||.......   :||.:.:.:.||. 
 Worm   416 NPSKQPTEGRWNPNQKIE---------------INGQGESLKTSIETV---VLGNNRKSLEITA- 461

  Fly   547 RQLPDNTTYTLIFRPLRAVM---------RYQYRALQQLSFTRHSDVQRIL-------------- 588
             .:|.|....|.|:....::         |.....||::|  ..|:.:||:              
 Worm   462 -TIPKNNNKLLNFQTGTWIVSQSQFLETPRLDCEFLQKMS--PSSNGRRIVTALYGGSPINSTGN 523

  Fly   589 --------FPGEIPNTPLASGVLQLNNKLISTNPEQMQAVRQIALSPRLKAPYIVFG--PPGTGK 643
                    ||.:||               |..|..|.|.|..|     |....::.|  |.|.||
 Worm   524 INWNKQFEFPSKIP---------------IGLNQYQNQYVSMI-----LSGVPLILGNSPFGCGK 568

  Fly   644 TSTIVEAIYQLY--------INRPETHILVLAGSNTA-------------CDEVALRLLRAIAKA 687
            :.|||.|..:|.        .|:.:   |::..||.|             ||.:  |.||.::::
 Worm   569 SMTIVTAAVELQKKYMRSESFNKQQ---LLVTQSNNAGVNLIEFALKLHKCDHI--RFLRYVSES 628

  Fly   688 -----PQSQPRPLTR---------IFSANCDRRIDNIDDLLLE---------------------- 716
                 |.|....|..         .::.|.:.:.:|.::|..|                      
 Worm   629 NWNSLPDSSKTELDMPILMEDEFFEWATNTEIQKENGENLTREMKKAIVEQSTQKYHCKGILVGE 693

  Fly   717 ----YSNMY---------TVHFYPAVQAVHQYRIVICTLSLAGKLSTGGFAANNV---YTHVFVD 765
                |.|:.         ......|..|::...|::.|..     |......|||   .:::..|
 Worm   694 AKRIYENILKNQREHKPSQAILKEAFFALYAPDIIVSTAD-----SIHNLLENNVLRDVSNIQFD 753

  Fly   766 EAAASTEAEVLMGITCTLSPTLNLILSGDHKQLGPV-----LQSQRANEWGLGLTLFERLLQRKC 825
            ||:...| ..|:.:.... |..:..|.||..|| |.     ||. ...::|:|.|:         
 Worm   754 EASQVPE-HTLISLLHKF-PNASFGLVGDINQL-PAYCDDDLQG-LLKDYGIGKTM--------- 805

  Fly   826 YQVEEDGSYNASVQTRLIRNFRSHPEIVSLYNNMYYEGHL-----RTEAPMEIVCRFHNWFYLPN 885
            .:...|..:..|: .||:  :|.||....:.::::|.|.|     :.:....:..|...|   ||
 Worm   806 ARASRDKMFPQSI-LRLV--YRCHPTTTKILSDLFYNGQLISGVEKNQRDEFMRMRPDIW---PN 864

  Fly   886 ATFPIMF--HSVFGTTMNTKSSVSLCNNKEIDVVMDYVKDLMYFGLNGEKLLQTDIGIISPYKNQ 948
            ::|||:.  |...|..|.|    |:.||.|.|.|:..| .|:...:.|..|.::||||||.||.|
 Worm   865 SSFPILVLNHEKDGYRMGT----SVANNSEKDQVVRIV-SLLTKKVKGYGLSESDIGIISFYKAQ 924

  Fly   949 YQRIQEQLNMRNWSQIDCGSVELFQGKEKHVIIVSFVRSFTPKLGFLNNERRLNVLLSRPISLLI 1013
            ...:.:.|..   :.:.||:::.|||.|:.|:||..... .|.| |:....|:||.:||.....|
 Worm   925 TSLLADALKK---TDVKCGTIDAFQGTEREVMIVCCTNK-NPSL-FMQEGTRVNVAMSRARQATI 984

  Fly  1014 LIGNPRTLSQNSDFQHIIEMCRNRK------TLVGEQYLNEDFITNKKTG--ANNVNKGGAAG-- 1068
            :|||...|.:...:..|.:..:..|      |..|.:......:..|.|.  :|.:.|....|  
 Worm   985 IIGNIAKLKKAKHWDTIAQSAQINKCSMEVSTFGGSEQKQPQMVQIKCTAKKSNKIQKNQNEGKH 1049

  Fly  1069 -----------DQPASGLRQPLKRKNHAKNPVQDA 1092
                       |...|...|..:|:.:..|..|::
 Worm  1050 ISISQTVKTKEDTEQSSKPQQRRRRRNRNNIGQNS 1084

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG6701NP_001188923.1 TIGR00376 424..1037 CDD:273041 165/756 (22%)
AAA_19 618..687 CDD:289986 24/91 (26%)
AAA_12 812..1019 CDD:289832 64/213 (30%)
C44H9.4NP_506213.2 AAA_11 539..786 CDD:289831 54/264 (20%)
UvrD_C_2 823..988 CDD:304668 56/177 (32%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG1112
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D148890at33208
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
32.820

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