DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG6701 and C05C10.2

DIOPT Version :9

Sequence 1:NP_001188923.1 Gene:CG6701 / 36550 FlyBaseID:FBgn0033889 Length:1333 Species:Drosophila melanogaster
Sequence 2:NP_001364625.1 Gene:C05C10.2 / 174546 WormBaseID:WBGene00007329 Length:1525 Species:Caenorhabditis elegans


Alignment Length:1080 Identity:229/1080 - (21%)
Similarity:382/1080 - (35%) Gaps:340/1080 - (31%)


- Green bases have known domain annotations that are detailed below.


  Fly   217 QENFEKIEKYEEHVEY----------------------------HGDESDF------------QS 241
            |::.|.::.|.:|...                            |.|..||            |.
 Worm   461 QQDLEDLDLYRQHEMQTNVFTKFFDIGKSEKRKFGPGKSISNCRHSDAIDFAAMSYIWKNIRQQH 525

  Fly   242 LKKMKKYPTPIVSLSYQTCVDSHYFGFTLKTFRKDLVVD--KFIIVQLRQFYYVY--GAQMPLPV 302
            |.|:.|.|..::.|.....:||.     :..|.:.||.:  |:|::......:.|  |....|.:
 Worm   526 LPKLPKLPNMVLPLPTSMPLDSE-----ICAFYRVLVENKSKYILIACHMNVHGYHRGDLRFLEI 585

  Fly   303 NGSGELVFFVDSHVFMILREQPIVIGFTIQGEKYVEQHHFMRTEALPKASFNINPY--RLSSKET 365
            |.|.:|..|          |...|||....|: .|......|.......:|.| |:  .:||:.|
 Worm   586 NESTKLYGF----------EGRSVIGQLFLGD-IVAVTELARCNGHGSDAFKI-PFDVSMSSQNT 638

  Fly   366 ---FKSK-GLPPANPPIQVL-SALKH---------EDAQMCLASFDNQYQNYCERGREITQE--- 413
               ..|| .||...||..|| |.:|:         |...:.:.|..|...:...:|.....|   
 Worm   639 CTWMASKITLPSRPPPASVLFSFMKNRMAVVKGCDEPMNVEVKSIQNVEPDLIYKGTAFKPEKPE 703

  Fly   414 --------------------------NLTGTLRTLLQVEDIERLQHY-------LSLKQSEMELH 445
                                      |..||:.. .|..||:. :||       ...|.:|:.|.
 Worm   704 LNFTEGFIKKKRHQIGSITLRIASYPNSFGTIYN-FQESDIDN-EHYKIGINAFSEEKFTEISLD 766

  Fly   446 QFGRELSVKMQMGTT-------------SMSVEDILSPGDDVLIINEKGNPKSAVRKMLENNNNV 497
            :..:.:.....||.:             :..:|:|...|..|:...|  ||.|.....|....|.
 Worm   767 EREKIVETCSLMGFSAANTIFNGRFDCRAFKMEEIKKNGMTVMFCIE--NPTSQPTLGLWCAGNR 829

  Fly   498 LELALKDFDSILRWARNVDGMVGSLDKQPRVYFARILG-------------------VSTQRVNI 543
            :.:...:.|        |:|.:.::...|.:.:.||..                   ||.:.|  
 Worm   830 IVIGGPNGD--------VNGAIETVIDDPDIGYLRIAARLSRDIPKKFSFKGDGEFFVSQREV-- 884

  Fly   544 TCERQLPDNTTYTLIFRPL------RAVMRYQY--RALQQLSF-TRHSDVQRI---LF------- 589
             .|.::.|:.    .|:.|      |.::...|  :.|:::.. .|.|.::|:   ||       
 Worm   885 -FENEILDDG----YFKTLDPGCNGRRIIETLYGGKPLERVVVDKRDSSIERMMSQLFGVGSGIS 944

  Fly   590 ------------PGE--IPNTPLASGVLQLNNKLISTNPEQMQAVRQIALSPRLKAPYIVFG--P 638
                        |.:  .|:||          :.::.|..|.:.|:.:     |....::.|  |
 Worm   945 EHKTSGKKSEDTPTQFYFPSTP----------EPLALNKYQCEYVQML-----LDGNPLIIGSSP 994

  Fly   639 PGTGKTSTIVEAIYQLYINRPETHILVLAGSNTA-----------C-----DEVALRLLRAIA-- 685
            .|.||:.||:.|..:||..:.....|::..||.|           |     |...|:.:|.::  
 Worm   995 FGCGKSMTIITAALELYKLKKNRKQLLITQSNYASVNLIDIAQRVCLSGDDDLKDLKFVRFVSEK 1059

  Fly   686 ---------KAPQSQPRPLTRIFSANCDRRIDNIDDLLLEYSNMYTVHFYPAVQAVHQYRIVICT 741
                     :.....|..:.::|......|||     |...:.:.|.|:...|..:.:..:|...
 Worm  1060 NWNELPSNCRTDSDMPYLMNKLFKDWAMGRID-----LTNLTCLKTHHYVQMVSHIIKNDLVNPM 1119

  Fly   742 L------SLAGKLSTGGFAANNVYT--------------------------------HVFVDEAA 768
            |      .:..|||.....|.:..|                                .|.:|||:
 Worm  1120 LFGDHIAQIYDKLSADFSRAPHAQTLVEAFFMIYKPDLVMVTADSAKGLLNILRDVCAVQIDEAS 1184

  Fly   769 ASTEAEVLMGITCTLSPTLNLI---------LSGDHKQLGPVLQ---SQRANEWGLGLTLFERLL 821
            ...|        |||   |.|:         |.||..||.|..:   ..:..::|:|.|: ||.:
 Worm  1185 QLAE--------CTL---LGLLKSFNNASFGLIGDIHQLPPYCEEGLEGKLKDFGIGNTM-ERAI 1237

  Fly   822 QRKCYQVEEDGSYNASVQTRLIRN-FRSHPEIVSLYNNMYYEGHLRTE----APMEIVCRFHNWF 881
            :.|.:.|            ..:|| :|.||:...|.:.::|:|.|.:.    |..:.:.:..:::
 Worm  1238 KEKMFPV------------CTLRNVYRCHPKTTELLSELFYDGALVSGVSELARSDFMTKRDDFW 1290

  Fly   882 YLPNATFPIMFHSVFGTTMNTKSSVSLCNNKEIDVVMDYVKDLMYFGLNGEKLLQTDIGIISPYK 946
              ||..||:||  |..|..:||...|..|:.|..:|.:.|::|:....|  .:..:|||:||.|.
 Worm  1291 --PNPKFPMMF--VNNTGASTKMGTSTSNSSEKSIVGEIVQNLINDPRN--PVNPSDIGVISFYS 1349

  Fly   947 NQYQRIQEQLNMRNWSQIDCGSVELFQGKEKHVIIVSFVRSFTPKLG-FLNNERRLNVLLSRPIS 1010
            .|...:.|.|   ..|.:.||:|:.|||.||.:||:.   |...::. |:....||||.:||...
 Worm  1350 AQTSILTEHL---RGSGVKCGTVDAFQGSEKEIIIMC---STNERISDFMQLSNRLNVAMSRAKQ 1408

  Fly  1011 LLILIGNPRTLSQNSDFQHIIEMCRNRKTLV--GEQYLNE 1048
            :.|:||:...|.:.:.:..|:........||  .:.|.|:
 Worm  1409 VTIIIGHLDGLRRANYWSTIVNKIEQNGNLVNANDWYQNQ 1448

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG6701NP_001188923.1 TIGR00376 424..1037 CDD:273041 166/769 (22%)
AAA_19 618..687 CDD:289986 20/97 (21%)
AAA_12 812..1019 CDD:289832 64/212 (30%)
C05C10.2NP_001364625.1 DNA2 <941..1442 CDD:224037 127/556 (23%)
SF1_C_Upf1 1253..1433 CDD:350195 57/191 (30%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.910

Return to query results.
Submit another query.