DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG6701 and znfx-1

DIOPT Version :9

Sequence 1:NP_001188923.1 Gene:CG6701 / 36550 FlyBaseID:FBgn0033889 Length:1333 Species:Drosophila melanogaster
Sequence 2:NP_001367278.1 Gene:znfx-1 / 174463 WormBaseID:WBGene00014208 Length:2443 Species:Caenorhabditis elegans


Alignment Length:1112 Identity:214/1112 - (19%)
Similarity:372/1112 - (33%) Gaps:377/1112 - (33%)


- Green bases have known domain annotations that are detailed below.


  Fly   115 LLHRTNFLINTPRGNPNYRIKNFSLMDFRKEKFNLLDEQHRLRGIASTTDVPGGAP-AEGNKPII 178
            |:|.:..:.     .||::....|.....:|| .|:...:.||.:|:......|.| ..|.....
 Worm   919 LVHGSKIIF-----RPNFQQAEKSEYQISEEK-KLMKTYNELRSLAACARYTKGKPIPRGVDDDD 977

  Fly   179 EEYKLDTDVKPTLLKFQKRLLLQSDKDFELQSL---------GCYICQENFEKIEKY-------- 226
            |:|:..          :.|.|.:.|.|.|.:.|         |..|...|..:|.|.        
 Worm   978 EDYEFS----------KSRELSKEDIDLEYRQLQEPIFRPLVGVDIKDSNLIQINKKWYNVSRLL 1032

  Fly   227 -EEHVEYHGDESDFQSLKKMKKYPTPIVSLSYQTCVDSHYFGFTLKTFRKDLVVDKFIIVQLRQF 290
             |.|.:|. |||...:.....||...::.....| ..:|.....:||           |:|.|.:
 Worm  1033 DEFHPDYM-DESQRLAFCNTFKYELSLIQGPPGT-GKTHIGVQIVKT-----------ILQNRSY 1084

  Fly   291 YYVYGAQMPLPVNGSGELVFFVDS---HVFMILRE---------QPIVIGFTIQGEK----YVEQ 339
            :.:....:.:....||     :|:   .::.::..         :|.:|.|   |.|    |:::
 Worm  1085 WKITEPILVVCFTNSG-----LDNLLERIYQMIENDEELSKDNGRPKIIRF---GSKCDSNYLKR 1141

  Fly   340 HHFMRTEALPKASFNINPYRLSSKETFKSKGLPPANPPI-QVLSALKHEDAQMCLASFDNQYQNY 403
            .:.||.:..               |.:|||....|...: :..:|.:|:...:.::|    |..:
 Worm  1142 QNVMRQDVY---------------EQYKSKVSDGAQKKMSKAGAARRHKADNLAISS----YTLF 1187

  Fly   404 CERGREITQENLTGTLRTLLQVEDIERLQHYLSLKQSEMELHQFGRELSVKMQMGTTSMSVEDIL 468
            |.|.:             ||..|.:.|:..    ...:||:.||..:     .:.|..:.    |
 Worm  1188 CSRNK-------------LLSYEMLSRVMD----PNHQMEIQQFTYD-----HVDTKGIP----L 1226

  Fly   469 SPGDDV---LIINEKGN-PKSAVRKMLENNNNVLELALKDFDSILRWARNVDGMVGSLDKQPRVY 529
            ||.:.:   |:..:.|. .||..:|..:......:|..:|.:.......:.|.....||.:    
 Worm  1227 SPDEAIGCWLLERDFGKATKSQTKKAKKPKFQGAQLDSEDENKDYFTVEDSDDEEDELDDE---- 1287

  Fly   530 FARILGVSTQRVNITCERQLPDNTTYTLIFRPLRAVMRYQYRALQQLSFTRHSDVQRILFPGEIP 594
              ::|....:::|:.|...           ..|.||            ...|:|......|.||.
 Worm  1288 --KLLDKLFEKMNLECSGA-----------DILSAV------------HASHADEYYTKGPWEIV 1327

  Fly   595 NTPLASGVL-----------------QLNN-------KLISTNP---EQMQAVRQIALSPRLKAP 632
            .....|.|:                 |:||       .::|:.|   :.:..::.|....|||. 
 Worm  1328 QDKRPSVVVLMEKKTKPCNAKFTVDEQINNLVSEIKDMILSSQPVPKKDLNDIKYIFSLARLKR- 1391

  Fly   633 YIVFGPPGTGKTSTIVEAIYQLYINRPETHILVLAGSNTACDEVALRLLRAIAKAPQSQPRPLTR 697
                               :.|||              |.||     .||:|  ..::.||.:..
 Worm  1392 -------------------WSLYI--------------TWCD-----ALRSI--VTENLPRQIRE 1416

  Fly   698 IFSA-----NCDRRIDNIDDLLLEYSNMYTV---------HFYPAVQAVHQYRIVICTLSLAGKL 748
            ...|     |...|:|      .|...|..:         ...|.::.|.. ||:|         
 Worm  1417 YREACENFKNAQNRVD------AEIMRMTMIIGATTTGCSRLRPTLEKVGP-RILI--------- 1465

  Fly   749 STGGFAANNVYTHVFVDEAAASTEAEVLMGITCTLSPTLNLILSGDHKQLGPVLQSQRANE---- 809
                           |:|||...||.:   |:..:|...::::.||||||.|   :...:|    
 Worm  1466 ---------------VEEAAEVLEAHI---ISAMISTVEHVVMIGDHKQLRP---NPAVHELGVA 1509

  Fly   810 WGLGLTLFERLLQR--KCYQVEEDGSYNASVQTRLIR-----------NFRSHPEIVSLYNNMYY 861
            :||.:::||||::|  ...|:.:....|.::..::::           |...:|::..:..|:::
 Worm  1510 YGLRISMFERLVERGLPFSQLRQQHRMNLTISDKIVKLSFYDNVTDAENVGLYPDVQGMATNLFF 1574

  Fly   862 EGHLRTEAPMEIVCRFHNWFYLPNATFPIMFHSVFGTTMNTKSSVSLCNNKEIDVVMDYVKDLMY 926
            ..|...|                                .:...||..|..||.:.:..||.|: 
 Worm  1575 WSHTSME--------------------------------ESPDEVSWLNKHEISMTVALVKHLL- 1606

  Fly   927 FGLNGEKLLQTDIGIISPYKNQYQRIQEQLNMRNWSQ----------IDCGSVELFQGKEKHVII 981
                .:.....||.:::.|.     .|:.|..|.::.          |...:|:.|||||:.::|
 Worm  1607 ----KQNYTTNDIVVLATYS-----AQKNLMYREYANVFGSTPDSNVIPVETVDSFQGKERKIVI 1662

  Fly   982 VSFVRSF-----TPKLGFLNNERRLNVLLSRPISLLILIGNPRTLSQNSDFQHIIEMCRNRKTLV 1041
            ||.|||.     ...:|||....|:.|.|:|....:.:|||...:..||:..:.|.....|..|:
 Worm  1663 VSLVRSHRGGRENTGIGFLAVANRICVALTRAQHGMYIIGNGAYIMNNSELWNKIVNNLRRSNLI 1727

  Fly  1042 GEQYLNEDFITNKKTGANNVNKGGAAGDQPASGLRQPLKRKNHAK-NPVQDAKIFYSKNELLNLG 1105
              :|                              ..|||...|.. ..|:|.:.|.:|:......
 Worm  1728 --EY------------------------------NLPLKCVAHGNIVTVKDPQDFATKSPEGGCM 1760

  Fly  1106 NECQRKK 1112
            .:|..||
 Worm  1761 QKCDTKK 1767

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG6701NP_001188923.1 TIGR00376 424..1037 CDD:273041 134/689 (19%)
AAA_19 618..687 CDD:289986 13/68 (19%)
AAA_12 812..1019 CDD:289832 50/234 (21%)
znfx-1NP_001367278.1 DEAD-like_helicase_N 1040..>1133 CDD:421690 19/113 (17%)
AAA_11 <1328..1499 CDD:404072 47/245 (19%)
EEXXEc_NFX1 <1434..1534 CDD:350694 31/130 (24%)
SF1_C_Upf1 1536..1722 CDD:350195 46/227 (20%)
exchanger_TraA <1763..2130 CDD:411343 3/5 (60%)
NF-X1-zinc-finger 2017..>2057 CDD:100116
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.910

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