DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG6701 and ighmbp2

DIOPT Version :9

Sequence 1:NP_001188923.1 Gene:CG6701 / 36550 FlyBaseID:FBgn0033889 Length:1333 Species:Drosophila melanogaster
Sequence 2:XP_004913487.1 Gene:ighmbp2 / 100497063 XenbaseID:XB-GENE-6258282 Length:984 Species:Xenopus tropicalis


Alignment Length:1074 Identity:232/1074 - (21%)
Similarity:391/1074 - (36%) Gaps:288/1074 - (26%)


- Green bases have known domain annotations that are detailed below.


  Fly   405 ERGREITQENLTGTLRTLLQVEDIERL-QHYLSLKQSEMELHQFGREL--SVKMQMGTTSMSVED 466
            ||..||.:   |.|.|..:.:::::|. ...|.|:.:......:||.|  ....:..:.::...:
 Frog    15 EREAEIQE---TRTWRENISLKELQRRGVCLLKLQVANQRTGLYGRLLVTFTPRKYDSEAILPSN 76

  Fly   467 ILSPGDDVLIINEKGNPKSAVRKMLENNNNVLELALKDFDSILRWARNVDGMV-GSLDKQPRVYF 530
            ...|| |::.:.|..:|..             :||              .|:| |...|...|.|
 Frog    77 SFGPG-DIVGLYEASSPNE-------------QLA--------------TGIVAGVTQKVVNVAF 113

  Fly   531 ARILGVSTQRVNITCE-----RQLPDNTTYTLIFRPLRAVMRYQYRALQQLSFTRHSDVQRILFP 590
            ..   .|...:|:..|     .:|.::.||..|.|.|.|:  .|||:.|.      |.:..:||.
 Frog   114 DE---SSNDSLNLGTECTYRLLKLANDVTYKRIKRALTAL--GQYRSGQA------SSLIDVLFC 167

  Fly   591 GEIPNTPLASGVLQLNNKLISTNPEQMQAVRQIALSPRLKAPYIVFGPPGTGKTSTIVEAIYQLY 655
            ...|:..:....::..|  :|.:..|.:|| ..:|:.|..|  ::.||||||||:|:||.|.|..
 Frog   168 SSEPSHSVQKRQVEFFN--LSLDDSQKEAV-SFSLNQREVA--VIHGPPGTGKTTTVVEIILQAV 227

  Fly   656 INRPETHILVLAGSNTACDEVALRL---------LRAIAKAPQS-QPRPLTRIFSANCDRRI--D 708
              :....:|..|.||.|.|.:..||         |...|:..:| |...|..:.:.:.:.:|  |
 Frog   228 --KEGLKVLCCAPSNVAVDNLVERLSVFKEKILRLGHPARLLESLQHHSLDAVLARSDNAQIVAD 290

  Fly   709 NIDDLLLEYSNMYTVH-----------------------FYPAVQAVHQYRIVICT---LSLAGK 747
            ...|:...::.|..:|                       ....|:.:.:..:::.|   .||.|.
 Frog   291 IRRDIDQTFAKMKKLHGKQEKSGYRTEIKALRKELKEREEAAMVETLKRANVILATNTGASLDGP 355

  Fly   748 LSTGGFAANNVYTHVFVDEAAASTEAEVLMGITCTLS--PTLNLILSGDHKQLGPVLQSQRANEW 810
            |.   ....:.:..|.:||.|.:.||      :|.:|  .....||:||||||.|.:.|.:|...
 Frog   356 LK---LLPEDYFDLVVIDECAQALEA------SCWISLLQAKKCILAGDHKQLPPTIISHKAAAN 411

  Fly   811 GLGLTLFERLLQRKCYQVEEDGSYNASVQTRLIRNFRSHPEIVSLYNNMYYEGHL---------- 865
            ||.|:|.||:.::          |...|...|...:|.|..|:...:...|.|.|          
 Frog   412 GLSLSLMERVTEK----------YGEKVVKMLTVQYRMHQSIMQWASEALYGGRLTAHSSVSQHL 466

  Fly   866 -----------RTEAPMEIVCRFHNWFYLPNATFPIMFHSVFGTTMNTKSSVSLCNNKEIDVVMD 919
                       .|..|:.::...|...:                .|..:...|..|..|:.:|..
 Frog   467 LKDLPGVSVTEETSIPLLLIDTAHCGLF----------------EMEVEDEQSKGNPGEVQLVDL 515

  Fly   920 YVKDLMYFGLNGEKLLQTDIGIISPYKNQYQRIQEQLNMRNWSQIDCGSVELFQGKEKHVIIVSF 984
            :::.|...|:..:     ||.:|:||..|...:::.|..| :..::..||:.|||:||..:::||
 Frog   516 HIQALTKAGVKPQ-----DIAVIAPYNLQVDMLRQCLRQR-YPDLEIKSVDGFQGREKEAVVLSF 574

  Fly   985 VRSFTP-KLGFLNNERRLNVLLSRPISLLILIGNPRTLSQNSDFQHIIEMCRNR----------K 1038
            |||.:. ::|||..:||:||.::|....:.:|.:..|:..:...:.:|......          :
 Frog   575 VRSNSKGEVGFLAEDRRINVAVTRARRHVAVICDSHTVGNHQFLKDLITYFSEHGEVRTAFEYLE 639

  Fly  1039 TLVGEQYLNEDFITNKK---------TGANNVNKGGAAGDQPASGLRQPLKRKNHAKNPVQDAKI 1094
            .:|.|:|..|:..|.|.         |.....|.||.:........:...|.|..|...|     
 Frog   640 DIVPEKYSRENGTTGKPETQAKKAVGTKQKKPNTGGPSHQSHVDTTKTISKDKFKASPAV----- 699

  Fly  1095 FYSKNELLNLGNECQRKKSELETIFDELPKVPRS---------VDHDLDEVRSIEAQL------- 1143
              .||: |:...:....|..|.|:.::..|.|..         ..||..:|..:..:|       
 Frog   700 --GKNK-LDPHTDTVMAKDHLRTMIEDFLKDPNKTQLVFPSSLTSHDRLQVHQMAEELGLAHTST 761

  Fly  1144 ---KDFQLE-TKQDAAGTSILVTNAPVTNAAAPSVIPRAG-------------LMKQETPALHSS 1191
               |:..:. ||..|.....:.:....::|...|.:|..|             ..|.:...||..
 Frog   762 GDGKERSISVTKPKAISADAVSSQTDDSDAGPCSQLPSLGNESSQKKTNCSQSSSKVDLKTLHLE 826

  Fly  1192 SVSRPAIR-------KPTVSAATPVAKSRSPMPEIPSSSKHPISMSSNPLSTNTE---------- 1239
            .:.|...|       |....:..|.||.:       :.:|...|.||...||:||          
 Frog   827 RLQREKARLEERVRNKQDSLSLKPAAKKK-------TDAKGKTSGSSIASSTDTENFDALIAATM 884

  Fly  1240 ---------RCVNGVL------------------------CGIEAVPPSENKTTRSSAYNHIPSG 1271
                     :|...|:                        ||.:|   ..|...|.|....|.||
 Frog   885 KADNTCGFAKCKTSVVTVADFCAHCNKRYCLSHHIPEIHGCGEKA---KANARMRISREGVIYSG 946

  Fly  1272 N-FRFENVRPTPEE------VRRFNGANDQRRAR 1298
            : .:..::.||.:.      .::.|....||:|:
 Frog   947 SGSKDHSLDPTKKAHLQRRLDKKINDLTSQRKAK 980

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG6701NP_001188923.1 TIGR00376 424..1037 CDD:273041 157/683 (23%)
AAA_19 618..687 CDD:289986 28/77 (36%)
AAA_12 812..1019 CDD:289832 53/228 (23%)
ighmbp2XP_004913487.1 TIGR00376 20..636 CDD:273041 161/705 (23%)
R3H_Smubp-2_like 714..773 CDD:100070 10/58 (17%)
zf-AN1 890..927 CDD:376545 3/36 (8%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.910

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