DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG6701 and LOC100360296

DIOPT Version :9

Sequence 1:NP_001188923.1 Gene:CG6701 / 36550 FlyBaseID:FBgn0033889 Length:1333 Species:Drosophila melanogaster
Sequence 2:XP_008771545.2 Gene:LOC100360296 / 100360296 RGDID:2322455 Length:239 Species:Rattus norvegicus


Alignment Length:136 Identity:29/136 - (21%)
Similarity:58/136 - (42%) Gaps:32/136 - (23%)


- Green bases have known domain annotations that are detailed below.


  Fly   410 ITQENLTGTLRTLLQVEDIERLQHYLSLKQSEMELHQFGRELSVKMQMGTTSMSV---EDILSP- 470
            :.|:.:|.||:|:       :::....|.:.. |..:.|:.|.::.....|...|   ||:..| 
  Rat    76 VEQDEVTHTLKTI-------KVKVMTDLPEGS-EPSKLGKRLCIRCVTSVTEEDVYISEDVSFPL 132

  Fly   471 -----------GDDVLIINEKGNPKSAVRKMLENNNNVLELALKDFDSILRWARNVDGMVGSLDK 524
                       ||.||:.....:..|.:     |.::|..|:.:|.:.:  :..::||..|.:  
  Rat   133 YLFSGAFKPFKGDLVLVEYSMNSGMSNI-----NIHSVSPLSCQDINEV--YVTSIDGRNGMV-- 188

  Fly   525 QPRVYF 530
            :.||:|
  Rat   189 EARVFF 194

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG6701NP_001188923.1 TIGR00376 424..1037 CDD:273041 24/122 (20%)
AAA_19 618..687 CDD:289986
AAA_12 812..1019 CDD:289832
LOC100360296XP_008771545.2 None
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C166335120
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.930

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