DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG6701 and helz

DIOPT Version :9

Sequence 1:NP_001188923.1 Gene:CG6701 / 36550 FlyBaseID:FBgn0033889 Length:1333 Species:Drosophila melanogaster
Sequence 2:XP_031749843.1 Gene:helz / 100145753 XenbaseID:XB-GENE-5912847 Length:1948 Species:Xenopus tropicalis


Alignment Length:1627 Identity:344/1627 - (21%)
Similarity:556/1627 - (34%) Gaps:544/1627 - (33%)


- Green bases have known domain annotations that are detailed below.


  Fly    22 PTPPPTPPINAGIKPPGTYANGMPRKPTVPWERELMGSFLLEMARLQVIS--------AQTEWY- 77
            ||.|||.|                                 |::|:|..|        .|.:.| 
 Frog    43 PTNPPTQP---------------------------------ELSRIQTESLLYRIASFLQLKNYD 74

  Fly    78 ----------------VDKAKMRKLFEVHLNA-LPNSSEIRQK---------LSSQGATNIGSLL 116
                            :|.:....|..:||.. |...|.:..|         |.::..|.:..||
 Frog    75 QADEDCRHVLGPGRTRLDSSVHAVLCSLHLEGKLQAVSSVLSKCLAGETLNGLVTKDLTRLKILL 139

  Fly   117 HRTNFLINTPRGNPNYRIKNFSLMDFRKEKFNLLDE------QHR--LRGIASTTDVPGGAPAEG 173
            .....:.||.|.:    .....|.|.....|.:.|.      |.|  .||:.|:           
 Frog   140 AEIETVSNTVRSS----YHGDDLEDGTNCSFTIYDGGSHDGWQFRPPPRGVTSS----------- 189

  Fly   174 NKPIIEEYKL-----------------DTDVKPTLLKFQKR-----LLLQSDKDFELQSLGCYIC 216
                 |||.|                 ....:..|.::|||     :.|:..|: ..|..|.|: 
 Frog   190 -----EEYTLCKRFLEQGICRYGAQCTSAHSQEELEEWQKRYASRLIRLKQQKE-NTQFSGSYM- 247

  Fly   217 QENFEKIEKYEE---------------HVEYHGDESDFQSLKKMKKYPTPIVSLSYQTCVDSHYF 266
             |:.  |||:..               ||||..|.|...:.||           |:||..    |
 Frog   248 -ESL--IEKWMNSLSPEKVLSECADGVHVEYSPDLSVTVTTKK-----------SHQTWT----F 294

  Fly   267 GFTLKTFRKDLVVDKFIIVQLRQFYYVYGAQMP-------------------------------L 300
            ..|.|..|           .|::...:|.|..|                               :
 Frog   295 LLTCKPAR-----------PLQRVALLYDAHRPHFSIVAIAAGDSNSQVSQEVPESCQEWVGGNM 348

  Fly   301 PVNGSGELVFFV----DSHVFMILREQPIVIGFTIQGEKYVEQHHFMRTEALPKASFNINPYRLS 361
            ..||....::.|    .:.:|...| |.:|..|   |.:.|.....|    :..||.....|.:.
 Frog   349 AQNGMDHCIYKVVIAFTTEIFGTFR-QTVVFDF---GAEPVLMQRIM----VDAASTEDLEYLMH 405

  Fly   362 SKETFKSKGLPPANPPIQVLSALKHEDA-QMCLASFDNQYQNYCERG------------------ 407
            :::              |:|:..|..|: ...:..|:.......||.                  
 Frog   406 ARQ--------------QLLTTAKRWDSMSKTIVEFEPNETTEMERSLLSRYQIPLSADQLFTQS 456

  Fly   408 ---REITQENLTGTLRTLLQVEDIERLQHYLSLKQSEMELHQFGRELSVKMQMGTTSMSVEDILS 469
               :.:|:.|....|..||.:|:|.:.:          |:.:|  .:.|::|:..:.|       
 Frog   457 VLDKSLTKCNYQARLHDLLYIEEIAQYK----------EVSKF--NIKVQLQLVASFM------- 502

  Fly   470 PGDDVLIINEKGNPKSAVRKMLENNNNVLE----------LALKDFDSILRWARNVDGMVGSLDK 524
                  :....|..|.|....|.....:.|          |.:...:::.......:..|.|...
 Frog   503 ------LTGVSGGAKYAQNGQLFGRFKLTETLSEDTLAGRLVMTKVNAVYVLPVTKERSVQSQGT 561

  Fly   525 QPRVY------------FARILGVSTQRVNITCERQLPDNTTYTLIFRPLRAVMRYQYRALQQLS 577
            :.:||            |.||.......:.:..:|::.....:.|...|| ..|.|....::..|
 Frog   562 KEKVYEAVIEEKTKDYIFLRICKDCCDELKLKPDREMQVELQFQLNRLPL-CEMHYALDRVKDNS 625

  Fly   578 FTRHSDVQRILFPG-----EIPNTPLASGVLQLNNKLISTNPEQMQAVRQIA--LSPRLKAPYIV 635
                     ||||.     .||.:|.......|:.:|   |.:|.:|:..|.  ||.:| .|.::
 Frog   626 ---------ILFPDLSMTPPIPWSPNRQWDELLDPRL---NAKQKEAILAITTPLSVQL-PPILI 677

  Fly   636 FGPPGTGKTSTIVEAIYQLYINRPETHILVLAGSNTACDEVALRLLRAIAKAPQSQPRPLTRIFS 700
            .||.|||||.|:.:|:..: :.:.||.:|:...||:|.|......|....:....|.||| |::.
 Frog   678 IGPYGTGKTFTLAQAVKHI-LKQQETRVLICTHSNSAADLYIKDYLHPYVETGNPQARPL-RVYF 740

  Fly   701 ANCDRRIDNIDDLLLEY---SNMYTVHFYPAVQAVHQYRIVICTLSLAGKLS----TGGFAANNV 758
            .|  |.:..:..::.:|   |:.::|...|..:.:.|:|:|:.|||.:..|.    ..||     
 Frog   741 RN--RWVKTVHPVVHQYCLISSTHSVFQMPQKEDILQHRVVVVTLSTSQYLCQLDLEPGF----- 798

  Fly   759 YTHVFVDEAAASTEAEVLMGITCTLSPTLNLILSGDHKQLGPVLQSQRANEWGLGLTLFERLLQR 823
            :||:.:||||.:.|.|.:|.:... |.:..::|:|||.||.|.:.|:.|.|..|.::|.:||   
 Frog   799 FTHILLDEAAQAMECETIMPLALA-SKSTRIVLAGDHMQLSPFVYSEFARERNLHVSLLDRL--- 859

  Fly   824 KCYQVEEDGSYNASVQTRLI--RNFRSHPEIVSLYNNMYYEGHLRTEAPMEIVCRFHNWFYLPNA 886
              |::     |......|::  .|:|||..|::..:.::|||.|........    |..||    
 Frog   860 --YEL-----YPVDFPCRILLCENYRSHEAIINYTSELFYEGKLMASGKQPA----HKDFY---- 909

  Fly   887 TFPIMFHSVFGTTMNTKSSVSLCNNKEIDVVMDYVKDL-----MYFGLNGEKLLQTDIGIISPYK 946
              |:.|.:..|..:..|:|.:..||.|:..|::.|::|     :.:|    ||.:..||:::||.
 Frog   910 --PLTFFTARGEDVQEKNSTAFYNNAEVFEVVERVEELRRKWPVAWG----KLDEGSIGVVTPYA 968

  Fly   947 NQYQRIQEQLNMRNWSQIDCGSVELFQGKEKHVIIVSFVRS-------FTP-------------- 990
            :|..||:.:|..:..|:|....|...|||:..|:.:|.||:       .||              
 Frog   969 DQVFRIRAELRKKRLSEISVERVLNVQGKQFRVLFLSTVRTRHTCKHKQTPIKRKEQLLEDSTED 1033

  Fly   991 -KLGFLNNERRLNVLLSRPISLLILIGNPRTLSQ----NSDFQHIIEMCRNRKTLVG---EQYLN 1047
             ..|||:|.:.||..::|..||:.::|:|..|..    ...::..|.:|...|:|.|   ||..:
 Frog  1034 LDYGFLSNYKLLNTAITRAQSLVAVVGDPIALCSIGRCRKFWEQFISICHENKSLHGITFEQIKS 1098

  Fly  1048 E-DFITNKKTGANNVNKGGAAGDQPASGLRQPLK--------RKNHAKNPVQD--------AKIF 1095
            : :.:..|||...|                 ||.        |:.|:.||.:.        .|..
 Frog  1099 QLEALELKKTYVLN-----------------PLAPEFIPRALRQQHSGNPSKQQQQQSPPKCKGH 1146

  Fly  1096 YSKNELLNLGNECQRKKSELETIFDEL-----PKVPRS-VDHDLDEVRSIEAQLKDFQLETKQDA 1154
            :::|:........|:..|.|  |.:.:     |..|.| :......|:.|:..            
 Frog  1147 HNQNDHFPGDGLVQQNPSVL--IGNPIRAYTPPLGPHSNIGKSPSPVQRIDPH------------ 1197

  Fly  1155 AGTSILVTNA-----PVTNAAAP----------SVIPRAGLMKQETPAL---------------- 1188
            .|||||...|     .|.:...|          ||.||  ||.....|.                
 Frog  1198 TGTSILYVPAVYGGNMVMSVPLPVPWPSYQGRFSVDPR--LMTHTAMAYNMNLLQAHGRGSPIPF 1260

  Fly  1189 ---HSSSVSRPAIRKPTV------------------------SAATPVAKSRSPMP--EIPSSSK 1224
               |.|.|:....::|..                        ...||..|...|.|  ..|::.:
 Frog  1261 GLGHHSPVNVGPPQQPLQHPDKDQHEQHRNGKSESNQGTDLNKLRTPEKKPLEPKPGDMDPNAQR 1325

  Fly  1225 HPISMSS----NP----LSTNTERCVNGVLCGIEAVPPSENKTTRSSAYNHI-----PSGNFRFE 1276
            .|.|..:    ||    ....::|.:|     :...||.......|..|.|:     |..:.:.:
 Frog  1326 SPDSRGNTAFLNPKFHRKENPSQRHLN-----VHLAPPQPQFPLPSRHYQHLSQLQRPPFSIQQQ 1385

  Fly  1277 NV---------------RPTPEE-VRRFN-----GANDQRRARPFREPHGNWSNFGWSPPPRDPT 1320
            ||               .|.|.: |.:.|     .|....:..|...|..|.|.|. :|.|..|.
 Frog  1386 NVLTQQQNHLSELQNQIPPQPGQLVPQLNHLTQPPAPQGSQLSPAFPPGANHSFFN-NPMPGRPH 1449

  Fly  1321 PP 1322
            .|
 Frog  1450 SP 1451

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG6701NP_001188923.1 TIGR00376 424..1037 CDD:273041 168/681 (25%)
AAA_19 618..687 CDD:289986 23/70 (33%)
AAA_12 812..1019 CDD:289832 63/235 (27%)
helzXP_031749843.1 zf-CCCH 192..216 CDD:395517 2/23 (9%)
DEXXQc_HELZ 652..878 CDD:350835 74/249 (30%)
AAA_12 851..1062 CDD:404073 63/234 (27%)
Atrophin-1 <1154..>1471 CDD:397323 62/320 (19%)
PHA03247 <1403..1831 CDD:223021 14/50 (28%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D286011at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
11.010

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