Protein Alignment CG6701 and upf1

DIOPT Version :9

• Sequence 1: NP_001188923.1
• Gene: CG6701 / 36550
• FlyBaseID: FBgn0033889
• Length: 1333
• Species: Drosophila melanogaster
• Sequence 2: XP_002938872.2
• Gene: upf1 / 100135270
• XenbaseID: XB-GENE-6258022
• Length: 1100
• Species: Xenopus tropicalis
• Alignment Length: 1072
• Identity: 243/1072 - (22%)
• Similarity: 406/1072 - (37%)
• Gaps: 348/1072 - (32%)

  Fly   313 DSHVFMILREQPIVIGFTI--------QGEKYVEQHHFMR-TEALPKASFNINPYRLSSKETFKS 368
            ||.|.::.| ||.....::        |.:..::...|:. ...:|.....:...::::::..|.
 Frog   183 DSVVVLLCR-QPCASQSSLKDINWDSSQWQPLIQDRCFLSWLVKIPSEQEQLRARQITAQQINKL 246

  Fly   369 KGLPPANP---------------PIQVLSALKHEDAQMCLASFDNQYQN-----------YCERG 407
            :.|...||               |..||  |::|||.        ||||           |.::.
 Frog   247 EELWKENPSATLEDLEKPGVDEEPQHVL--LRYEDAY--------QYQNIFGPLVKLEADYDKKL 301

  Fly   408 REI-TQENLTGTLRTLLQVEDIERLQHY-LSLKQSEMELHQFGRELSVKMQMGTTSM-------- 462
            :|. ||:|:  |:|..|.:.. :|:.:: |....|:|.|.| |.|:.::.:.....:
 Frog   302 KESQTQDNI--TVRWDLGLNK-KRIAYFTLPKTDSDMRLMQ-GDEICLRYKGDLAPLWKGIGHVI 362

  Fly   463 SVEDILSPGDDVLIINEKGNPKSAVRKMLENNNNV-------------LELALKDF--DSILRWA 512
            .|.|  :.||::.|     ..:|:|...:|..:|.             ::.|||.|  |.
 Frog   363 KVPD--NYGDEIAI-----ELRSSVGAPVEVTHNFQVDFVWKSTSFDRMQSALKTFAVDE----- 415

  Fly   513 RNVDGMVGSLDKQPRVYFARILGVSTQRVNITCERQLPDNTTYTLIFRPLRAVMRYQYRALQQLS 577
            .:|.|.:          :.::||...:.|.|.|  |||...|
 Frog   416 TSVSGYI----------YHKLLGHEVEDVIIKC--QLPKRFT----------------------- 445

  Fly   578 FTRHSDVQRILFPGEIPNTPLASGVLQLNNKLISTNPEQMQAVRQIALSPRLKAPY-IVFGPPGT 641
                                 |.|:..||:       .|:.||:.:     |:.|. ::.|||||
 Frog   446 ---------------------AQGLPDLNH-------SQVYAVKTV-----LQRPLSLIQGPPGT 477

  Fly   642 GKTSTIVEAIYQL--YINRPETHILVLAGSNTACDEV-------ALRLLRAIAKAPQSQPRPLTR 697
            |||.|....:|.|  ..|.|   :||.|.||.|.|::       .|:::|..||:.::...|::.
 Frog   478 GKTVTSATIVYHLARQGNGP---VLVCAPSNIAVDQLTEKIHQTGLKVVRLCAKSREAIDSPVSF 539

  Fly   698 IFSANCDRRIDNIDDLLLEYSNMYTVHFYPAVQAVHQ---------------YR----------- 736
            :...|   :|.|::.:             |.:|.:.|               ||
 Frog   540 LALHN---QIRNMESM-------------PELQKLQQLKDETGELSSADEKRYRALKRTAERELL 588

  Fly   737 ----IVICTLSLAG--KLSTGGFAANNVYTHVFVDEAAASTEAEVLMGITCTLSPTLNLILSGDH 795
                ::.||...||  :|      |...:..:.:||:..:||.|.::.:.....   .|||.|||
 Frog   589 MNADVICCTCVGAGDPRL------AKMQFRSILIDESTQATEPECMVPVVLGAK---QLILVGDH 644

  Fly   796 KQLGPVLQSQRANEWGLGLTLFERLLQRKCYQVEEDGSYNASVQTRLIRNFRSHPEIVSLYNNMY 860
            .|||||:..::|.:.||..:|||||:......:            ||...:|.||.:.:..:|::
 Frog   645 CQLGPVVMCKKAAKAGLSQSLFERLVVLGIRPI------------RLQVQYRMHPALSAFPSNIF 697

  Fly   861 YEGHLR--TEAPMEIVCRFHNWFYLPNATFPIMFHSVFGTTMNTKSSVSLCNNKEIDVVMDYVKD 923
            |||.|:  ..|...:...|.  |..|....|:.|:...|......|..|..|..|...|......
 Frog   698 YEGSLQNGVTAADRVKKGFD--FQWPQPDKPMFFYVTQGQEEIASSGTSYLNRTEAANVEKITTK 760

  Fly   924 LMYFGLNGEKLLQTDIGIISPYKN------QYQRIQEQLNMRNWSQIDCGSVELFQGKEKHVIIV 982
            |:..|...::     ||||:||:.      ||.:....|:.:.:.:::..||:.|||:||..||:
 Frog   761 LLKAGAKPDQ-----IGIITPYEGQRSYLVQYMQFSGSLHTKLYQEVEIASVDAFQGREKDFIIL 820

  Fly   983 SFVRSFTPK-LGFLNNERRLNVLLSRPISLLILIGNPRTLSQNSDFQHIIEMCRNRKTLVGEQYL 1046
            |.||:...: :||||:.|||||.|:|....:|::|||:.||:...:.|::...:.:|.||
 Frog   821 SCVRANEHQGIGFLNDPRRLNVALTRARYGVIIVGNPKALSKQPLWNHLLNYYKEQKVLV----- 880

  Fly  1047 NEDFITNKKTGANNVNKGGAAGDQPASGLRQPLKRKNHAKNPVQDAKIFYSKNELLNLGNECQRK 1111
                                  :.|.:.||:.|.:             |....:|:|..|...|.
 Frog   881 ----------------------EGPLNNLRESLMQ-------------FSKPRKLVNTINPGARF 910

  Fly  1112 KSELETIFDELPK-VPRSVDHDLDEVRSIEAQLKDFQLETKQDAAG------TSILVTNAPVT-N 1168
            .:  ..::|.... :|.|| :|    ||.:.:..:...:| .|..|      :.:...|.|:. |
 Frog   911 MT--TAMYDAREAIIPGSV-YD----RSSQGRPSNMYFQT-HDQIGMIGSGPSHVTAMNIPIPFN 967

  Fly  1169 AAAPSVIP----------------------RAGLMKQE---TPALH-----SSSVSRPAIRKPTV 1203
            ...|.:.|                      |.|..||.   .|.:.     :|..|:..:.:|.
 Frog   968 LVMPPMPPPGYFGQANGPAPGRGMPKGKATRGGRQKQRGIGLPGMSQGNMPNSQASQDVVSQPF- 1031

  Fly  1204 SAATPVAKSRSPMPEIPSSSKHPISMSSNPLS 1235
                    |:.|:.:...|...|..||...||
 Frog  1032 --------SQGPLTQGYISMSQPSQMSQPGLS 1055

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
CG6701	NP_001188923.1	TIGR00376	424..1037	CDD:273041	168/687 (24%)
		AAA_19	618..687	CDD:289986	27/78 (35%)
		AAA_12	812..1019	CDD:289832	65/215 (30%)
upf1	XP_002938872.2	DNA2	126..890	CDD:224037	206/875 (24%)
		DEXXQc_UPF1	451..684	CDD:350797	72/284 (25%)

Information from Original Tools

Tool	Simple Score	Weighted Score	Original Tool Information
			BLAST Result	Score	Score Type	Cluster ID
Compara	0	0.000	Not matched by this tool.
Domainoid	0	0.000	Not matched by this tool.
eggNOG	0	0.000	Not matched by this tool.
Hieranoid	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoDB	0	0.000	Not matched by this tool.
OrthoFinder	1	1.000	-	-		FOG0000219
OrthoInspector	0	0.000	Not matched by this tool.
Panther	0	0.000	Not matched by this tool.
Phylome	0	0.000	Not matched by this tool.
RoundUp	0	0.000	Not matched by this tool.
SonicParanoid	0	0.000	Not matched by this tool.
SwiftOrtho	0	0.000	Not matched by this tool.
TreeFam	0	0.000	Not matched by this tool.
	1	1.000