DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment PheRS-m and SPCC736.03c

DIOPT Version :9

Sequence 1:NP_477283.1 Gene:PheRS-m / 36547 FlyBaseID:FBgn0275436 Length:453 Species:Drosophila melanogaster
Sequence 2:NP_587774.1 Gene:SPCC736.03c / 2538914 PomBaseID:SPCC736.03c Length:429 Species:Schizosaccharomyces pombe


Alignment Length:434 Identity:164/434 - (37%)
Similarity:250/434 - (57%) Gaps:55/434 - (12%)


- Green bases have known domain annotations that are detailed below.


  Fly    45 TDGWTNVTPKILSYVGANKHLQTDHPLSIIRQRIVNYFYGAYRNQRGNPLFSVYDQMNPVVTVQQ 109
            ||.|:||...|.|.:|.|...:..||:..:||.:...|.....|.        ..:.:|:|:|:.
pombe    26 TDSWSNVPEHIHSKIGRNLFQKEGHPICSLRQLLEQQFQKFEMNN--------VQKESPIVSVET 82

  Fly   110 NFDNLLIPADHVSRQKSDCYYINQQHLLRAHTTAHQVE----LISGGL--DNFLVVGEVYRRDEI 168
            |||:|..|..||||.|||.||:|.:..||.||:|||.|    |...|.  :.||:..:||||||:
pombe    83 NFDSLGFPKTHVSRSKSDTYYMNNKTCLRTHTSAHQPEEFSRLAKEGFKKNGFLITADVYRRDEV 147

  Fly   169 DSTHYPVFHQADAVRLVTKDKLFERNPGLELFEETWSGTLADPKLILPSSKFM--DQT------- 224
            ||:|||:|||.:..      .::.||...::..:.....|:      ||.|.|  |:|       
pombe   148 DSSHYPIFHQMEGA------LVWNRNDTAKMKNDLKKVALS------PSLKSMVDDETTALETHN 200

  Fly   225 -KQPCHTLEAVKLMEHEMKHVLVGLTKDLF---------GPRIKYRWVDTYFPFTQPSWELEIYF 279
             .|..::||..|.:...:|..|..:..||.         ..:::|||....||||:||::|||.:
pombe   201 DMQDIYSLEETKFVSQHLKDTLTTVIHDLVSLAPSISSGAEQVRYRWTYDSFPFTKPSFQLEIDW 265

  Fly   280 KDNWLEVLGCGIMRHEILQRSGVHQSIGYAFGVGLERLAMVLFDIPDIRLFWSNDSGFLSQFSEK 344
            |..|||:||||:::..:|:.:|::..||:|||:|||||||:|:.|||||||||.|..|..||.. 
pombe   266 KGKWLEILGCGVVQDRLLKGAGLNNYIGWAFGIGLERLAMILYGIPDIRLFWSLDERFSKQFLP- 329

  Fly   345 DLHNLPKYKPISHYPQCTNDLSFWLPQDIEVDAGFSPNDFYDLVRSVAGDMVEQISLVDKFKHPK 409
              :.:..:||.|.||.|..|::||:..|      |:|||||:::|.|..||||.::|:|::. .|
pombe   330 --NKISTFKPFSKYPACFKDIAFWINND------FNPNDFYEIIRDVCQDMVESVNLIDQYT-AK 385

  Fly   410 TGKSSVCFRIVYRHMERTLTQAEVNEIHKQIASASVDSFNVQIR 453
            :||:|:|:|:.||.|||:|...|::::.:::.:...:|..|::|
pombe   386 SGKTSLCYRVNYRSMERSLRNEEIDKLQEKLRNRVANSLRVELR 429

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
PheRS-mNP_477283.1 pheS_mito 29..452 CDD:129561 163/431 (38%)
PheRS_alpha_core 69..334 CDD:238277 111/289 (38%)
FDX-ACB 356..453 CDD:214893 37/96 (39%)
SPCC736.03cNP_587774.1 pheS_mito 23..428 CDD:129561 163/431 (38%)
PheRS_alpha_core 50..322 CDD:238277 112/291 (38%)
FDX-ACB 339..429 CDD:214893 37/96 (39%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 1 1.000 113 1.000 Domainoid score I1564
eggNOG 1 0.900 - - E1_COG0016
Hieranoid 1 1.000 - -
Homologene 1 1.000 - - H4788
Inparanoid 1 1.050 297 1.000 Inparanoid score I614
OMA 1 1.010 - - QHG54668
OrthoFinder 1 1.000 - - FOG0003716
OrthoInspector 1 1.000 - - oto101793
orthoMCL 1 0.900 - - OOG6_102538
Panther 1 1.100 - - LDO PTHR11538
Phylome 00.000 Not matched by this tool.
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R1439
SonicParanoid 1 1.000 - - X3075
TreeFam 1 0.960 - -
1312.950

Return to query results.
Submit another query.