DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CtsL1 and Tinagl1

DIOPT Version :10

Sequence 1:NP_523735.2 Gene:CtsL1 / 36546 FlyBaseID:FBgn0013770 Length:371 Species:Drosophila melanogaster
Sequence 2:NP_446034.2 Gene:Tinagl1 / 94174 RGDID:70956 Length:467 Species:Rattus norvegicus


Alignment Length:233 Identity:67/233 - (28%)
Similarity:107/233 - (45%) Gaps:46/233 - (19%)


- Green bases have known domain annotations that are detailed below.


  Fly   171 DQGHCGSCWAFSSTG-ALEGQHFRKSGVLVS-LSEQNLVDCSTKYGNNGCNGGLMDNAFRYIKDN 233
            |||:|...||||:.. |.:.......|.:.. ||.|||:.|.|.: ..||.||.:|.|:.:::..
  Rat   221 DQGNCAGSWAFSTAAVASDRVSIHSLGHMTPILSPQNLLSCDTHH-QKGCRGGRLDGAWWFLRCR 284

  Fly   234 GGIDTEKSYPY---EAIDDS-----CHFNKGTVGATDRGFT-----------DIPQ--------G 271
             |:.::..||:   |..|::     |..:...:|...|..|           ||.|        .
  Rat   285 -GVVSDNCYPFSGREQNDEASPTPRCMMHSRAMGRGKRQATSRCPNSHVDSNDIYQVTPVYRLAS 348

  Fly   272 DEKKMAEAVATVGPVSVAIDASHESFQFYSEGVYN-------EPQCDAQNLDHGVLVVGFGTDES 329
            |||::.:.:...|||...::. ||.|..|..|:|:       .|:...::..|.|.:.|:| :|:
  Rat   349 DEKEIMKELMENGPVQALMEV-HEDFFLYQRGIYSHTPVSQGRPEQYRRHGTHSVKITGWG-EET 411

  Fly   330 GED-----YWLVKNSWGTTWGDKGFIKMLRNKENQCGI 362
            ..|     ||...||||..||::|..:::|. .|:|.|
  Rat   412 LPDGRTIKYWTAANSWGPWWGERGHFRIVRG-TNECDI 448

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CtsL1NP_523735.2 Inhibitor_I29 59..118 CDD:214853
Peptidase_C1 154..370 CDD:425470 67/233 (29%)
Tinagl1NP_446034.2 Somatomedin_B 53..93 CDD:470596
Peptidase_C1A_CathepsinB 203..455 CDD:239111 67/233 (29%)
Blue background indicates that the domain is not in the aligned region.

Return to query results.
Submit another query.