DRSC/TRiP Functional Genomics Resources

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Protein Alignment Cp1 and RD21B

DIOPT Version :9

Sequence 1:NP_523735.2 Gene:Cp1 / 36546 FlyBaseID:FBgn0013770 Length:371 Species:Drosophila melanogaster
Sequence 2:NP_568620.1 Gene:RD21B / 834321 AraportID:AT5G43060 Length:463 Species:Arabidopsis thaliana


Alignment Length:366 Identity:151/366 - (41%)
Similarity:216/366 - (59%) Gaps:42/366 - (11%)


- Green bases have known domain annotations that are detailed below.


  Fly    31 MRTAVLLPLLALLAVAQAVSFADVVMEEWH------------------TFKLEHRKNYQDE---- 73
            ::.:.::.|||::.|:.|:..:.:..:|.|                  .:.:||.|...::    
plant     4 LKLSPMILLLAMIGVSYAMDMSIISYDENHHITTETSRSDSEVERIYEAWMVEHGKKKMNQNGLG 68

  Fly    74 TEERFRLKIFNENKHKIAKHNQRFAEGKVSFKLAVNKYADLLHHEFRQLMNGFNYTLHKQLRAAD 138
            .|:..|.:||.:|...|.:||.:    .:|:||.:.::|||.:.|:|.:..|...| .:.|:.:|
plant    69 AEKDQRFEIFKDNLRFIDEHNTK----NLSYKLGLTRFADLTNEEYRSMYLGAKPT-KRVLKTSD 128

  Fly   139 ESFKGVTFISPAHVTLPKSVDWRTKGAVTAVKDQGHCGSCWAFSSTGALEGQHFRKSGVLVSLSE 203
            .      :.:.....||.|||||.:|||..|||||.||||||||:.||:||.:...:|.|:||||
plant   129 R------YQARVGDALPDSVDWRKEGAVADVKDQGSCGSCWAFSTIGAVEGINKIVTGDLISLSE 187

  Fly   204 QNLVDCSTKYGNNGCNGGLMDNAFRYIKDNGGIDTEKSYPYEAIDDSCHFN-KGTVGATDRGFTD 267
            |.||||.|.| |.||||||||.||.:|..|||||||..|||:|.|..|..| |.....|...:.|
plant   188 QELVDCDTSY-NQGCNGGLMDYAFEFIIKNGGIDTEADYPYKAADGRCDQNRKNAKVVTIDSYED 251

  Fly   268 IPQGDEKKMAEAVATVGPVSVAIDASHESFQFYSEGVYNEPQCDAQNLDHGVLVVGFGTDESGED 332
            :|:..|..:.:|:|. .|:||||:|...:||.||.||: :..|..: |||||:.||:|| |:|:|
plant   252 VPENSEASLKKALAH-QPISVAIEAGGRAFQLYSSGVF-DGLCGTE-LDHGVVAVGYGT-ENGKD 312

  Fly   333 YWLVKNSWGTTWGDKGFIKMLRNKE---NQCGIASASSYPL 370
            ||:|:||||..||:.|:|||.||.|   .:||||..:|||:
plant   313 YWIVRNSWGNRWGESGYIKMARNIEAPTGKCGIAMEASYPI 353

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Cp1NP_523735.2 Inhibitor_I29 59..118 CDD:214853 18/80 (23%)
Peptidase_C1 154..370 CDD:278538 120/219 (55%)
RD21BNP_568620.1 Inhibitor_I29 50..109 CDD:214853 17/62 (27%)
Peptidase_C1 138..353 CDD:278538 120/219 (55%)
GRAN 377..433 CDD:197621
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 1 1.000 233 1.000 Domainoid score I635
eggNOG 1 0.900 - - E1_COG4870
Hieranoid 1 1.000 - -
Homologene 1 1.000 - - H76699
Inparanoid 1 1.050 260 1.000 Inparanoid score I973
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1275401at2759
OrthoFinder 1 1.000 - - FOG0000114
OrthoInspector 1 1.000 - - otm2515
orthoMCL 1 0.900 - - OOG6_100116
Panther 1 1.100 - - O PTHR12411
Phylome 1 0.910 - -
SonicParanoid 1 1.000 - - X64
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 1 0.960 - -
1312.830

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