DRSC/TRiP Functional Genomics Resources

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Protein Alignment Cp1 and RD19

DIOPT Version :9

Sequence 1:NP_523735.2 Gene:Cp1 / 36546 FlyBaseID:FBgn0013770 Length:371 Species:Drosophila melanogaster
Sequence 2:NP_568052.1 Gene:RD19 / 830064 AraportID:AT4G39090 Length:368 Species:Arabidopsis thaliana


Alignment Length:349 Identity:132/349 - (37%)
Similarity:187/349 - (53%) Gaps:46/349 - (13%)


- Green bases have known domain annotations that are detailed below.


  Fly    43 LAVAQAVSFAD--VVMEEWH--TFKLEHRKNYQDETEERFRLKIFNENKHKIAKHNQRFAEGKVS 103
            |.:.|.|..|:  |:..|.|  .||.:..|.|....|..:|..:|..|..:..:|.:.    ..|
plant    31 LVIRQVVGGAEPQVLTSEDHFSLFKRKFGKVYASNEEHDYRFSVFKANLRRARRHQKL----DPS 91

  Fly   104 FKLAVNKYADLLHHEFRQ----LMNGFNYTLHKQLRAADESFKGVTFISPAHVTLPKSVDWRTKG 164
            ....|.:::||...|||:    :.:||.  |.|....|.        |.|.. .||:..|||..|
plant    92 ATHGVTQFSDLTRSEFRKKHLGVRSGFK--LPKDANKAP--------ILPTE-NLPEDFDWRDHG 145

  Fly   165 AVTAVKDQGHCGSCWAFSSTGALEGQHFRKSGVLVSLSEQNLVDCSTKYG-------NNGCNGGL 222
            |||.||:||.|||||:||:||||||.:|..:|.|||||||.||||..:..       ::||||||
plant   146 AVTPVKNQGSCGSCWSFSATGALEGANFLATGKLVSLSEQQLVDCDHECDPEEADSCDSGCNGGL 210

  Fly   223 MDNAFRYIKDNGGIDTEKSYPYEAID-DSCHFNKGTVGATDRGFTDIPQGDEKKMAEAVATVGPV 286
            |::||.|....||:..|:.|||...| .:|..:|..:.|:...|:.| ..||:::|..:...||:
plant   211 MNSAFEYTLKTGGLMKEEDYPYTGKDGKTCKLDKSKIVASVSNFSVI-SIDEEQIAANLVKNGPL 274

  Fly   287 SVAIDASHESFQFYSEGVYNEPQCDAQNLDHGVLVVGFGTDESG--------EDYWLVKNSWGTT 343
            :|||:|.:  .|.|..|| :.|....:.|:||||:||:|.  :|        :.||::|||||.|
plant   275 AVAINAGY--MQTYIGGV-SCPYICTRRLNHGVLLVGYGA--AGYAPARFKEKPYWIIKNSWGET 334

  Fly   344 WGDKGFIKMLRNKENQCGIASASS 367
            ||:.||.|:.:.: |.||:.|..|
plant   335 WGENGFYKICKGR-NICGVDSMVS 357

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Cp1NP_523735.2 Inhibitor_I29 59..118 CDD:214853 14/60 (23%)
Peptidase_C1 154..370 CDD:278538 102/230 (44%)
RD19NP_568052.1 Inhibitor_I29 51..106 CDD:214853 13/58 (22%)
Peptidase_C1 135..359 CDD:395062 102/230 (44%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG4870
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 1 1.010 - - QHG53545
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 1 0.900 - - OOG6_100116
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
54.720

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