DRSC/TRiP Functional Genomics Resources

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Protein Alignment Cp1 and Tpbpa

DIOPT Version :9

Sequence 1:NP_523735.2 Gene:Cp1 / 36546 FlyBaseID:FBgn0013770 Length:371 Species:Drosophila melanogaster
Sequence 2:NP_742070.1 Gene:Tpbpa / 64509 RGDID:621454 Length:124 Species:Rattus norvegicus


Alignment Length:100 Identity:19/100 - (19%)
Similarity:45/100 - (45%) Gaps:10/100 - (10%)


- Green bases have known domain annotations that are detailed below.


  Fly    31 MRTAVLLPLLALLAVAQAVSFADVVMEEWHTFKLEHRKNYQDETEERFRLKIFNENKHKIAKHNQ 95
            |...|.|.:|. |.||.|....|..:..    :|:.:|.     :|.||..:::|....:..:|.
  Rat     1 MTPTVFLVILC-LGVASAAILPDTTLYA----ELQEQKG-----KEGFRKAVWDEFMKTVKLYNS 55

  Fly    96 RFAEGKVSFKLAVNKYADLLHHEFRQLMNGFNYTL 130
            :..:.:....:.::..::|...:|.::|...::::
  Rat    56 KSDQEEEELDIEMSALSELTDEDFMKIMTSISHSM 90

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Cp1NP_523735.2 Inhibitor_I29 59..118 CDD:214853 8/58 (14%)
Peptidase_C1 154..370 CDD:278538
TpbpaNP_742070.1 None
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG4870
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
21.810

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