DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CtsL1 and Ctsll3

DIOPT Version :10

Sequence 1:NP_523735.2 Gene:CtsL1 / 36546 FlyBaseID:FBgn0013770 Length:371 Species:Drosophila melanogaster
Sequence 2:NP_001395605.1 Gene:Ctsll3 / 498691 RGDID:1560071 Length:330 Species:Rattus norvegicus


Alignment Length:345 Identity:172/345 - (49%)
Similarity:217/345 - (62%) Gaps:19/345 - (5%)


- Green bases have known domain annotations that are detailed below.


  Fly    31 MRTAVLLPLLALLAVAQA----VSFADVVMEEWHTFKLEHRKNYQDETEERFRLKIFNENKHKIA 91
            |....||..|.|..::.|    .|| |.|.|||   |.:|.|.| :..||..:..::..|...|.
  Rat     1 MTPIFLLATLCLGMISAAPTHDPSF-DTVWEEW---KTKHGKTY-NTNEEGQKRAVWENNMKMIN 60

  Fly    92 KHNQRFAEGKVSFKLAVNKYADLLHHEFRQLMNGFNYTLHKQLRAADESFKGVTFISPAHVTLPK 156
            .||:.:.:||..|.|.:|.:.||.:.|||:||.||.....|.::...|.|.|         .:||
  Rat    61 LHNEDYLKGKHGFSLEMNAFGDLTNTEFRELMTGFQGQKTKMMKVFPEPFLG---------DVPK 116

  Fly   157 SVDWRTKGAVTAVKDQGHCGSCWAFSSTGALEGQHFRKSGVLVSLSEQNLVDCSTKYGNNGCNGG 221
            :||||..|.||.||:||.||||||||:.|:||||.|||:|.||.||||||||||..:||.||:||
  Rat   117 TVDWRKHGYVTPVKNQGPCGSCWAFSAVGSLEGQVFRKTGKLVPLSEQNLVDCSWSHGNKGCDGG 181

  Fly   222 LMDNAFRYIKDNGGIDTEKSYPYEAIDDSCHFNKGTVGATDRGFTDIPQGDEKKMAEAVATVGPV 286
            |.|.||:|:|||||:||..||||||::.:|.:|.....|...||..||. .|..:.:|||||||:
  Rat   182 LPDFAFQYVKDNGGLDTSVSYPYEALNGTCRYNPKYSAAKVVGFMSIPP-SENALMKAVATVGPI 245

  Fly   287 SVAIDASHESFQFYSEGVYNEPQCDAQNLDHGVLVVGFGTDESGEDYWLVKNSWGTTWGDKGFIK 351
            ||.||..|:|||||..|:|.||.|.:.||:|.|||||:|.:..|..|||||||||..||..|:||
  Rat   246 SVGIDIKHKSFQFYKGGMYYEPDCSSTNLNHAVLVVGYGEESDGRKYWLVKNSWGRDWGMDGYIK 310

  Fly   352 MLRNKENQCGIASASSYPLV 371
            |.::..|.|||||.:|||:|
  Rat   311 MAKDWNNNCGIASDASYPIV 330

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CtsL1NP_523735.2 Inhibitor_I29 59..118 CDD:214853 18/58 (31%)
Peptidase_C1 154..370 CDD:425470 129/215 (60%)
Ctsll3NP_001395605.1 Inhibitor_I29 29..87 CDD:214853 20/61 (33%)
Peptidase_C1 114..329 CDD:425470 129/215 (60%)

Return to query results.
Submit another query.