DRSC/TRiP Functional Genomics Resources

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Protein Alignment Cp1 and Ctsm

DIOPT Version :9

Sequence 1:NP_523735.2 Gene:Cp1 / 36546 FlyBaseID:FBgn0013770 Length:371 Species:Drosophila melanogaster
Sequence 2:NP_852043.2 Gene:Ctsm / 306720 RGDID:631420 Length:333 Species:Rattus norvegicus


Alignment Length:351 Identity:142/351 - (40%)
Similarity:205/351 - (58%) Gaps:28/351 - (7%)


- Green bases have known domain annotations that are detailed below.


  Fly    31 MRTAVLLPLLALLAVAQAVSFADVVMEEWHTFKLEHRKNYQDETEERFRLKIFNENKHKIAKHNQ 95
            |..||.|.:|.|..::.:.:...|:..||..:|:::.|.|..| ||..:..::.||..||..||.
  Rat     1 MTPAVFLAILCLRLISSSPAPDPVLDAEWQKWKIKYEKTYSLE-EEGQKRAVWEENMKKIKLHNG 64

  Fly    96 RFAEGKVSFKLAVNKYADLLHHEFRQLMNGFNY-TLHK----QLRAADESFKGVTFISPAHVTLP 155
            ....||..|.:.:|.:.|:...|||:||..... |:.|    |.|.|              |.:|
  Rat    65 ENGLGKHGFTMEMNAFGDMTIEEFRKLMIEIPIPTVKKENSVQKRQA--------------VNVP 115

  Fly   156 KSVDWRTKGAVTAVKDQGHCGSCWAFSSTGALEGQHFRKSGVLVSLSEQNLVDCSTKYGNNGCNG 220
            ..::||.:|.||.|:.||.|..|||||..||:|||.|:|:|.|:.||.|||||||...||.||..
  Rat   116 NFINWRKRGYVTPVRRQGRCNVCWAFSVAGAIEGQMFQKTGQLIPLSVQNLVDCSRPQGNLGCYL 180

  Fly   221 GLMDNAFRYIKDNGGIDTEKSYPYEAIDDSC--HFNKGTVGATDRGFTDIPQGDEKKMAEAVATV 283
            |....|.:|:|:|||:::|.:||||..:.||  |.:..|...||  |..:|:.::..| .||||:
  Rat   181 GNTYLALQYVKENGGLESEATYPYEEKEGSCRYHPDNSTASITD--FEFVPKNEDALM-NAVATL 242

  Fly   284 GPVSVAIDASHESFQFYSEGVYNEPQCDAQNLDHGVLVVGF---GTDESGEDYWLVKNSWGTTWG 345
            ||:||||||.||||.||..|:|:||.|.:..:.|.:|:||:   |.:..|..||::|||.|..||
  Rat   243 GPISVAIDARHESFLFYRNGIYHEPNCSSSVVTHAMLLVGYGFVGEESDGRKYWILKNSMGNKWG 307

  Fly   346 DKGFIKMLRNKENQCGIASASSYPLV 371
            ::|::|:.:::.|.||||:.:.||.|
  Rat   308 NRGYMKIAKDQGNHCGIATYALYPRV 333

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Cp1NP_523735.2 Inhibitor_I29 59..118 CDD:214853 18/58 (31%)
Peptidase_C1 154..370 CDD:278538 103/220 (47%)
CtsmNP_852043.2 Inhibitor_I29 29..87 CDD:214853 18/58 (31%)
Peptidase_C1A 115..331 CDD:239068 102/218 (47%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG4870
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 361 1.000 Inparanoid score I2125
OMA 1 1.010 - - QHG53545
OrthoDB 1 1.010 - - D1275401at2759
OrthoFinder 1 1.000 - - FOG0000114
OrthoInspector 1 1.000 - - otm44993
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR12411
Phylome 1 0.910 - -
SonicParanoid 1 1.000 - - X64
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
109.980

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