DRSC/TRiP Functional Genomics Resources

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Protein Alignment CtsL1 and Ctsh

DIOPT Version :10

Sequence 1:NP_523735.2 Gene:CtsL1 / 36546 FlyBaseID:FBgn0013770 Length:371 Species:Drosophila melanogaster
Sequence 2:NP_037071.1 Gene:Ctsh / 25425 RGDID:2447 Length:333 Species:Rattus norvegicus


Alignment Length:349 Identity:134/349 - (38%)
Similarity:192/349 - (55%) Gaps:28/349 - (8%)


- Green bases have known domain annotations that are detailed below.


  Fly    31 MRTAVLLPLLA----LLAVAQAVSFADVVMEEWH--TFKLEHRKNYQDETEERFRLKIFNENKHK 89
            |.||  ||||.    ||:...........:|::|  ::..:|:|.|... |...||::|..|..|
  Rat     1 MWTA--LPLLCAGAWLLSAGATAELTVNAIEKFHFTSWMKQHQKTYSSR-EYSHRLQVFANNWRK 62

  Fly    90 IAKHNQRFAEGKVSFKLAVNKYADLLHHEFRQLMNGFNYTLHKQLRAADESFKGVTFISPAHVTL 154
            |..||||    ..:||:.:|:::|:   .|.::.:.:.::..:...|...::...|  .|    .
  Rat    63 IQAHNQR----NHTFKMGLNQFSDM---SFAEIKHKYLWSEPQNCSATKSNYLRGT--GP----Y 114

  Fly   155 PKSVDWRTKG-AVTAVKDQGHCGSCWAFSSTGALEGQHFRKSGVLVSLSEQNLVDCSTKYGNNGC 218
            |.|:|||.|| .|:.||:||.|||||.||:|||||......||.:::|:||.||||:..:.|:||
  Rat   115 PSSMDWRKKGNVVSPVKNQGACGSCWTFSTTGALESAVAIASGKMMTLAEQQLVDCAQNFNNHGC 179

  Fly   219 NGGLMDNAFRYIKDNGGIDTEKSYPYEAIDDSCHFNKGTVGATDRGFTDIPQGDEKKMAEAVATV 283
            .|||...||.||..|.||..|.||||...:..|.||.....|..:...:|...||..|.||||..
  Rat   180 QGGLPSQAFEYILYNKGIMGEDSYPYIGKNGQCKFNPEKAVAFVKNVVNITLNDEAAMVEAVALY 244

  Fly   284 GPVSVAIDASHESFQFYSEGVYNEPQC--DAQNLDHGVLVVGFGTDESGEDYWLVKNSWGTTWGD 346
            .|||.|.:.: |.|..|..|||:...|  ....::|.||.||:| :::|..||:||||||:.||:
  Rat   245 NPVSFAFEVT-EDFMMYKSGVYSSNSCHKTPDKVNHAVLAVGYG-EQNGLLYWIVKNSWGSNWGN 307

  Fly   347 KGFIKMLRNKENQCGIASASSYPL 370
            .|:..:.|.| |.||:|:.:|||:
  Rat   308 NGYFLIERGK-NMCGLAACASYPI 330

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CtsL1NP_523735.2 Inhibitor_I29 59..118 CDD:214853 19/60 (32%)
Peptidase_C1 154..370 CDD:425470 100/218 (46%)
CtshNP_037071.1 Inhibitor_I29 33..88 CDD:462410 19/62 (31%)
Peptidase_C1A 115..329 CDD:239068 99/216 (46%)

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