DRSC/TRiP Functional Genomics Resources

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Protein Alignment Rpn13 and Adrm1

DIOPT Version :10

Sequence 1:NP_001137662.1 Gene:Rpn13 / 36545 FlyBaseID:FBgn0033886 Length:424 Species:Drosophila melanogaster
Sequence 2:NP_062796.2 Gene:Adrm1 / 56436 MGIID:1929289 Length:407 Species:Mus musculus


Alignment Length:427 Identity:181/427 - (42%)
Similarity:249/427 - (58%) Gaps:59/427 - (13%)


- Green bases have known domain annotations that are detailed below.


  Fly     9 GSSSNSSN-LVEFRAGRMNMVGKMVHPDPRKGLVYMTQSDDGLMHFCWKDRTSGKVEDDLIVFPD 72
            ||..:|:. |||||||:|::.|..|.||.||||||:.|:||.|:||||||||||.||||||:|||
Mouse    14 GSRGSSTKYLVEFRAGKMSLKGTTVTPDKRKGLVYIQQTDDSLIHFCWKDRTSGTVEDDLIIFPD 78

  Fly    73 DFEYKRVDQCKTGRVYVLKFKSSTRRMFFWMQEPKTDKDDEQCRRINELLNNPPSAHQRGGGGSN 137
            |.|:|||.||.:|||||||||:.::|:||||||||||:|:|.||::||.|||||.....|..||:
Mouse    79 DCEFKRVPQCPSGRVYVLKFKAGSKRLFFWMQEPKTDQDEEHCRKVNECLNNPPMPGSLGASGSS 143

  Fly   138 ---------DGDLQYMLNNMSQQQLMQL-----FGGVGQMG-----GLSSLLGQMNSRTPSSRNT 183
                     :|.||.:|.|||..|||||     .||:|.:|     ||:||||  :|..|:|.::
Mouse   144 GHELSALGGEGGLQSLLGNMSHSQLMQLIGPAGLGGLGGLGALTGPGLASLLG--SSGPPASSSS 206

  Fly   184 SSSGGGGASALQTPENVSVPRTPSAPSKSGSSRSSSNVNSQVGEGAGSSVDADAPGKNSTTSTTT 248
            |||                 |:.||.....||.||:.........|.:|..:.:|..:|...|:|
Mouse   207 SSS-----------------RSQSAAVTPSSSTSSARATPAPSAPAAASATSPSPAPSSGNGTST 254

  Fly   249 ASKST-GAYANPFQAYLSNLSPEHGAGRSLNIDLSTALPGADAINQIIADPEHVKTLIVHLPESE 312
            |:..| ....:..|:.|:.::...|.|.|..:||::.|. .:.:..|:|:.:..:.|:.:||..|
Mouse   255 AASPTQPIQLSDLQSILATMNVPAGPGGSQQVDLASVLT-PEIMAPILANADVQERLLPYLPSGE 318

  Fly   313 DVDDDRKQQIKDNITSPQFQQALAQFSSALQSAQLGPVIKQFELSNEAVAAAFSGNLEDFVRALE 377
            .: .....:|::.:|||||||||..||:||.|.||||::.||.|..|||.||..|::|.|.:|::
Mouse   319 SL-PQTADEIQNTLTSPQFQQALGMFSAALASGQLGPLMCQFGLPAEAVEAANKGDVEAFAKAMQ 382

  Fly   378 KSLPPGATMGGKPSASEKKASDP-ETPTSVARDENTD 413
            .:                ..||| |..|...:||..|
Mouse   383 NN----------------AKSDPKEGDTKDKKDEEED 403

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Rpn13NP_001137662.1 PH_Rpn13 18..122 CDD:270124 73/103 (71%)
RPN13_C 267..376 CDD:465170 42/108 (39%)
Adrm1NP_062796.2 PH_Rpn13 24..128 CDD:270124 73/103 (71%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 196..259 21/81 (26%)
RPN13_C 274..381 CDD:465170 42/108 (39%)
Interaction with UCHL5. /evidence=ECO:0000250 362..407 17/58 (29%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 381..407 8/39 (21%)

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