DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment AGO1 and AGO5

DIOPT Version :10

Sequence 1:NP_725341.1 Gene:AGO1 / 36544 FlyBaseID:FBgn0262739 Length:984 Species:Drosophila melanogaster
Sequence 2:NP_850110.1 Gene:AGO5 / 817334 AraportID:AT2G27880 Length:997 Species:Arabidopsis thaliana


Alignment Length:979 Identity:378/979 - (38%)
Similarity:550/979 - (56%) Gaps:70/979 - (7%)


- Green bases have known domain annotations that are detailed below.


  Fly    37 GKVYESQWTPSPTRPQSPSQAQTSFDTLTSPPAPGSSVNPTAVTSPSAQNVAAGGATVAGAAAT- 100
            |.|...:.|...|..|.|..:..|     .....|:..:||...:.|::.|:...::...:..| 
plant    56 GNVGRGENTGDLTATQVPVASAVS-----GGRGRGNIGDPTFSVASSSKTVSVASSSKEESKNTE 115

  Fly   101 AAQVASALGATTGSVTPAIATATPATQPDMPVFTCPRRPNLGREGRPIVLRANHFQVTMPRGYVH 165
            .::..|.|..|:....|.:.:..||:.   ...|.|.||..|..|:.:::|||||.|.:....::
plant   116 VSETMSNLQITSTETKPEMTSLPPASS---KAVTFPVRPGRGTLGKKVMVRANHFLVQVADRDLY 177

  Fly   166 HYDINIQPDKCPRKVNREIIETMVHAY-SKIFGVLKPVFDGRNNLYTRDPLPIGNERLELEVTLP 229
            |||::|.|:...:.|||.:::.:|..| ....|...|.:|||.:|||..|||..::  |..|.|.
plant   178 HYDVSINPEVISKTVNRNVMKLLVKNYKDSHLGGKSPAYDGRKSLYTAGPLPFDSK--EFVVNLA 240

  Fly   230 ------GEGKDRIFRVTIKWQAQVSLFNLEEALEGRTRQIPYDAILALDVVMRHLPSMTYTPVGR 288
                  ..||||.|:|.:|......|:.|::.|:.:.|:.|||.|..||||:|..||..|..|||
plant   241 EKRADGSSGKDRPFKVAVKNVTSTDLYQLQQFLDRKQREAPYDTIQVLDVVLRDKPSNDYVSVGR 305

  Fly   289 SFFSSPEGY-----YHPLGGGREVWFGFHQSVRPSQWKMMLNIDVSATAFYKAQPVIDFMCEVLD 348
            |||.:..|.     ...||.|.|.|.|:.||:|.:|..:.|||||||.:||:...|.||:.:.|:
plant   306 SFFHTSLGKDARDGRGELGDGIEYWRGYFQSLRLTQMGLSLNIDVSARSFYEPIVVTDFISKFLN 370

  Fly   349 IRDINEQRKPLTDSQRVKFTKEIKGLKIEITHCGQMRRKYRVCNVTRRPAQMQSFPLQLENGQTV 413
            |||:|   :||.||.|:|..|.::.||:::.|... .:..::..::..|.:...|.|:.::    
plant   371 IRDLN---RPLRDSDRLKVKKVLRTLKVKLLHWNG-TKSAKISGISSLPIRELRFTLEDKS---- 427

  Fly   414 ECTVAKYFLDKYRMKLRYPHLPCLQVGQEHKHTYLPLEVCNIVAGQRCIKKLTDMQTSTMIKATA 478
            |.||.:||.:||..:::|..||.:|.|.:.:..|||:|:|.|..|||..|:|.:.|.:.::|||.
plant   428 EKTVVQYFAEKYNYRVKYQALPAIQTGSDTRPVYLPMELCQIDEGQRYTKRLNEKQVTALLKATC 492

  Fly   479 RSAPDREREINNLVKRADFNNDSYVQEFGLTISNSMMEVRGRVLPPPKLQYGGRVSTGLTGQQLF 543
            :..||||..|.|||.:.::|:| ..:|||::::..:..:..||||||.|:|              
plant   493 QRPPDRENSIKNLVVKNNYNDD-LSKEFGMSVTTQLASIEARVLPPPMLKY-------------- 542

  Fly   544 PPQNKVSLASPNQGVWDMRGKQFFTGVEIRIWAIACFAPQRTVREDALRNFTQQLQKISNDAGMP 608
            ....|..:.:|..|.|:|..|:...|.::..|....|:.:  :.....:.|.:||..:....||.
plant   543 HDSGKEKMVNPRLGQWNMIDKKMVNGAKVTSWTCVSFSTR--IDRGLPQEFCKQLIGMCVSKGME 605

  Fly   609 IIGQPCFCKYATGPDQVEPMFRYLKITFPGLQLVVVVLPGKTPVYAEVKRVGDTVLGMATQCVQA 673
            ...||.....:..|:.:|.....:....|||||::|:||..|..|.::||:.:|.||:.:||.|.
plant   606 FKPQPAIPFISCPPEHIEEALLDIHKRAPGLQLLIVILPDVTGSYGKIKRICETELGIVSQCCQP 670

  Fly   674 KNVNKTSPQTLSNLCLKINVKLGGINSILVPSIR---PKVFNEPVIFLGADVTHPPAGDNKKPSI 735
            :.|||.:.|.:.|:.||||||.||.|::|..:||   |.:.:.|.|.:|||||||..|::..|||
plant   671 RQVNKLNKQYMENVALKINVKTGGRNTVLNDAIRRNIPLITDRPTIIMGADVTHPQPGEDSSPSI 735

  Fly   736 AAVVGSMD-AHPSRYAATVRVQQHRQEIIQEL-------------SSMVRELLIMFYKSTGGYKP 786
            ||||.||| ...::|...|..|.||:||||:|             |.::||..|.|.::||.. |
plant   736 AAVVASMDWPEINKYRGLVSAQAHREEIIQDLYKLVQDPQRGLVHSGLIREHFIAFRRATGQI-P 799

  Fly   787 HRIILYRDGVSEGQFPHVLQHELTAIREACIKLEPEYRPGITFIVVQKRHHTRLFCAE--KKEQS 849
            .|||.||||||||||..||.||:||||:||..|:..|.|.:||::||||||||||..:  .::.:
plant   800 QRIIFYRDGVSEGQFSQVLLHEMTAIRKACNSLQENYVPRVTFVIVQKRHHTRLFPEQHGNRDMT 864

  Fly   850 GKSGNIPAGTTVDVGITHPTEFDFYLCSHQGIQGTSRPSHYHVLWDDNHFDSDELQCLTYQLCHT 914
            .|||||..||.||..|.||.||||||.||.||||||||:|||||.|:|.|.:|:||.||..||:|
plant   865 DKSGNIQPGTVVDTKICHPNEFDFYLNSHAGIQGTSRPAHYHVLLDENGFTADQLQMLTNNLCYT 929

  Fly   915 YVRCTRSVSIPAPAYYAHLVAFRARYHLVEKEHDSGEGSHQSGCSEDRTPGAMARAITVHADTKK 979
            |.|||:||||..|||||||.||||||:: |.|...| ||.:|..|.......:::...:..:.|:
plant   930 YARCTKSVSIVPPAYYAHLAAFRARYYM-ESEMSDG-GSSRSRSSTTGVGQVISQLPAIKDNVKE 992

  Fly   980 VMYF 983
            ||::
plant   993 VMFY 996

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
AGO1NP_725341.1 ArgoN 146..275 CDD:465134 48/135 (36%)
ArgoL1 285..335 CDD:462567 25/54 (46%)
PAZ_argonaute_like 336..456 CDD:239212 38/119 (32%)
Piwi_ago-like 502..942 CDD:240015 206/458 (45%)
AGO5NP_850110.1 PLN03202 131..997 CDD:215631 362/899 (40%)

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