DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment AGO1 and Ago4

DIOPT Version :10

Sequence 1:NP_725341.1 Gene:AGO1 / 36544 FlyBaseID:FBgn0262739 Length:984 Species:Drosophila melanogaster
Sequence 2:NP_694817.2 Gene:Ago4 / 76850 MGIID:1924100 Length:861 Species:Mus musculus


Alignment Length:870 Identity:615/870 - (70%)
Similarity:716/870 - (82%) Gaps:29/870 - (3%)


- Green bases have known domain annotations that are detailed below.


  Fly   128 PDMPVFTCPRRPNLGREGRPIVLRANHFQVTMPRGYVHHYDINIQPDKCPRKVNREIIETMV-HA 191
            |...:|..||||.||..|:||.|.||||||.:|:..|:|||::|:|:|.||:||||:::||| |.
Mouse     8 PPASLFQPPRRPGLGTVGKPIRLLANHFQVQIPKIDVYHYDVDIKPEKRPRRVNREVVDTMVRHF 72

  Fly   192 YSKIFGVLKPVFDGRNNLYTRDPLPIGNERLELEVTLPGEGKDRIFRVTIKWQAQVSLFNLEEAL 256
            ..:|||..:|.:||:.|:||..|||||.:|:::||||||||||:.|:|:::|.:.|||..|.|||
Mouse    73 KMQIFGDRQPGYDGKRNMYTAHPLPIGRDRIDMEVTLPGEGKDQTFKVSVQWVSVVSLQLLLEAL 137

  Fly   257 EGRTRQIPYDAILALDVVMRHLPSMTYTPVGRSFFSSPEGYYHPLGGGREVWFGFHQSVRPSQWK 321
            .|...::|.|::.||||:.||||||.||||||||||.||||||||||||||||||||||||:.|.
Mouse   138 AGHLNEVPDDSVQALDVITRHLPSMRYTPVGRSFFSPPEGYYHPLGGGREVWFGFHQSVRPAMWN 202

  Fly   322 MMLNIDVSATAFYKAQPVIDFMCEVLDIRDINEQRKPLTDSQRVKFTKEIKGLKIEITHCGQMRR 386
            |||||||||||||:|||:|:||||||||::||||.|||||||||||||||:|||:|:||||||:|
Mouse   203 MMLNIDVSATAFYRAQPIIEFMCEVLDIQNINEQTKPLTDSQRVKFTKEIRGLKVEVTHCGQMKR 267

  Fly   387 KYRVCNVTRRPAQMQSFPLQLENGQTVECTVAKYFLDKYRMKLRYPHLPCLQVGQEHKHTYLPLE 451
            ||||||||||||..|:|||||||||.:|||||:||..||.::|::|||||||||||.||||||||
Mouse   268 KYRVCNVTRRPASHQTFPLQLENGQAMECTVAQYFKQKYSLQLKHPHLPCLQVGQEQKHTYLPLE 332

  Fly   452 VCNIVAGQRCIKKLTDMQTSTMIKATARSAPDREREINNLVKRADF--NNDSYVQEFGLTISNSM 514
            ||||||||||||||||.||||||||||||||||:.||:.|||....  ..|.|::|||:.:.|.|
Mouse   333 VCNIVAGQRCIKKLTDNQTSTMIKATARSAPDRQEEISRLVKSNSMVGGPDPYLKEFGIVVHNEM 397

  Fly   515 MEVRGRVLPPPKLQYGGRVSTGLTGQQLFPPQNKVSLASPNQGVWDMRGKQFFTGVEIRIWAIAC 579
            .|:.|||||.|.||||||              || ::|:|:|||||||||||:.|:||::||:||
Mouse   398 TELTGRVLPAPMLQYGGR--------------NK-TVATPSQGVWDMRGKQFYAGIEIKVWAVAC 447

  Fly   580 FAPQRTVREDALRNFTQQLQKISNDAGMPIIGQPCFCKYATGPDQVEPMFRYLKITFPGLQLVVV 644
            ||||:..|||.|::||.||:|||.||||||.|||||||||.|.|.|||||::||:|:.||||:||
Mouse   448 FAPQKQCREDLLKSFTDQLRKISKDAGMPIQGQPCFCKYAQGADSVEPMFKHLKMTYVGLQLIVV 512

  Fly   645 VLPGKTPVYAEVKRVGDTVLGMATQCVQAKNVNKTSPQTLSNLCLKINVKLGGINSILVPSIRPK 709
            :|||||||||||||||||:|||||||||.|||.|||||||||||||:|.||||||::|||..||.
Mouse   513 ILPGKTPVYAEVKRVGDTLLGMATQCVQVKNVVKTSPQTLSNLCLKMNAKLGGINNVLVPHQRPS 577

  Fly   710 VFNEPVIFLGADVTHPPAGDNKKPSIAAVVGSMDAHPSRYAATVRVQQHRQEI----------IQ 764
            ||.:||||||||||||||||.|||||||||||||.|||||.||||||..||||          :|
Mouse   578 VFQQPVIFLGADVTHPPAGDGKKPSIAAVVGSMDGHPSRYCATVRVQTSRQEITQELLYSQEVVQ 642

  Fly   765 ELSSMVRELLIMFYKSTGGYKPHRIILYRDGVSEGQFPHVLQHELTAIREACIKLEPEYRPGITF 829
            :|:||.|||||.||||| .:||.|||.||.||||||...|...||.|||:|||.||.:||||||:
Mouse   643 DLTSMARELLIQFYKST-RFKPTRIIYYRGGVSEGQMKQVAWPELIAIRKACISLEEDYRPGITY 706

  Fly   830 IVVQKRHHTRLFCAEKKEQSGKSGNIPAGTTVDVGITHPTEFDFYLCSHQGIQGTSRPSHYHVLW 894
            ||||||||||||||:|.|:.|||||:|||||||..:|||:|||||||||.|||||||||||.|||
Mouse   707 IVVQKRHHTRLFCADKMERVGKSGNVPAGTTVDSTVTHPSEFDFYLCSHAGIQGTSRPSHYQVLW 771

  Fly   895 DDNHFDSDELQCLTYQLCHTYVRCTRSVSIPAPAYYAHLVAFRARYHLVEKEHDSGEGSHQSGCS 959
            |||.|.:||||.|||||||||||||||||||||||||.|||||||||||:|:|||.||||.||.|
Mouse   772 DDNCFTADELQLLTYQLCHTYVRCTRSVSIPAPAYYARLVAFRARYHLVDKDHDSAEGSHVSGQS 836

  Fly   960 EDRTPGAMARAITVHADTKKVMYFA 984
            ..|.|.|:|:|:.:|.||:..||||
Mouse   837 NGRDPQALAKAVQIHHDTQHTMYFA 861

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
AGO1NP_725341.1 ArgoN 146..275 CDD:465134 69/129 (53%)
ArgoL1 285..335 CDD:462567 45/49 (92%)
PAZ_argonaute_like 336..456 CDD:239212 96/119 (81%)
Piwi_ago-like 502..942 CDD:240015 326/449 (73%)
Ago4NP_694817.2 ArgoN 26..155 CDD:465134 68/128 (53%)
ArgoL1 166..216 CDD:462567 45/49 (92%)
PAZ_argonaute_like 217..337 CDD:239212 96/119 (81%)
Piwi_ago-like 384..819 CDD:240015 326/450 (72%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 825..846 12/20 (60%)

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