DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment AGO1 and ago2

DIOPT Version :9

Sequence 1:NP_001246314.1 Gene:AGO1 / 36544 FlyBaseID:FBgn0262739 Length:984 Species:Drosophila melanogaster
Sequence 2:XP_009292643.1 Gene:ago2 / 570630 ZFINID:ZDB-GENE-110606-6 Length:898 Species:Danio rerio


Alignment Length:912 Identity:651/912 - (71%)
Similarity:741/912 - (81%) Gaps:31/912 - (3%)


- Green bases have known domain annotations that are detailed below.


  Fly    87 VAAGGAT--VAGAAATAAQVASALGATTGSVTPAIATATPATQPDMPVFTCPRRPNLGREGRPIV 149
            :.|.|||  ..|..::.:.|:              |.|:|.. |...||..|:||:.|..||.|.
Zfish     4 IGAAGATELFQGRPSSGSDVS--------------APASPPA-PQEYVFKPPQRPDFGTMGRTIK 53

  Fly   150 LRANHFQVTMPRGYVHHYDINIQPDKCPRKVNREIIETMV-HAYSKIFGVLKPVFDGRNNLYTRD 213
            |:||.|::.:|:..|:||:|:|:|:||||:|||||:|.|| |..::|||..|||:|||.||||..
Zfish    54 LQANFFEMEIPKLEVYHYEIDIKPEKCPRRVNREIVEHMVQHFKTQIFGDRKPVYDGRKNLYTAM 118

  Fly   214 PLPIGNERLELEVTLPGEGKDRIFRVTIKWQAQVSLFNLEEALEGRTRQIPYDAILALDVVMRHL 278
            |||||.:::|||||:|||||||.|:|.|||.:.|||..|.|||.||...||::.|.|||||||||
Zfish   119 PLPIGRDKVELEVTIPGEGKDRSFKVAIKWMSCVSLQALHEALSGRLPNIPFETIQALDVVMRHL 183

  Fly   279 PSMTYTPVGRSFFSSPEGYYHPLGGGREVWFGFHQSVRPSQWKMMLNIDVSATAFYKAQPVIDFM 343
            |||.|||||||||:..||..:|||||||||||||||||||.|||||||||||||||||||||:||
Zfish   184 PSMRYTPVGRSFFTPSEGCSNPLGGGREVWFGFHQSVRPSLWKMMLNIDVSATAFYKAQPVIEFM 248

  Fly   344 CEVLDIRDINEQRKPLTDSQRVKFTKEIKGLKIEITHCGQMRRKYRVCNVTRRPAQMQSFPLQLE 408
            |||||.:.|.||:|||||||||||||||||||:||||||||:|||||||||||||..|:||||.|
Zfish   249 CEVLDFKSIEEQQKPLTDSQRVKFTKEIKGLKVEITHCGQMKRKYRVCNVTRRPASHQTFPLQQE 313

  Fly   409 NGQTVECTVAKYFLDKYRMKLRYPHLPCLQVGQEHKHTYLPLEVCNIVAGQRCIKKLTDMQTSTM 473
            ||||:|||||:||.|||::.||||||||||||||.||||||||||||||||||||||||.|||||
Zfish   314 NGQTIECTVAQYFKDKYKLVLRYPHLPCLQVGQEQKHTYLPLEVCNIVAGQRCIKKLTDNQTSTM 378

  Fly   474 IKATARSAPDREREINNLVKRADFNNDSYVQEFGLTISNSMMEVRGRVLPPPKLQYGGRVSTG-- 536
            |:|||||||||:.||:.|::.|:||.|.||:|||:.:.:.|.||.||||..|.:.|||||...  
Zfish   379 IRATARSAPDRQDEISKLMRSANFNTDPYVREFGVMVRDDMTEVNGRVLQAPSILYGGRVRISSA 443

  Fly   537 ---------LTGQQLFPPQNKVSLASPNQGVWDMRGKQFFTGVEIRIWAIACFAPQRTVREDALR 592
                     |....|:..||| ::|:|.|||||||.|||.||:||::||||||||||...|..|:
Zfish   444 QLSIWLNPCLIWSCLWLFQNK-AIATPVQGVWDMRNKQFHTGIEIKVWAIACFAPQRQCTELLLK 507

  Fly   593 NFTQQLQKISNDAGMPIIGQPCFCKYATGPDQVEPMFRYLKITFPGLQLVVVVLPGKTPVYAEVK 657
            .||.||:|||.||||||.|||||||||.|.|.|||||::||.|:.|||||||:||||||||||||
Zfish   508 AFTDQLRKISRDAGMPIQGQPCFCKYAQGADSVEPMFKHLKYTYQGLQLVVVILPGKTPVYAEVK 572

  Fly   658 RVGDTVLGMATQCVQAKNVNKTSPQTLSNLCLKINVKLGGINSILVPSIRPKVFNEPVIFLGADV 722
            |||||||||||||||.|||.||:|||||||||||||||||:|:||:|..||.||.:|||||||||
Zfish   573 RVGDTVLGMATQCVQVKNVQKTTPQTLSNLCLKINVKLGGVNNILLPQGRPLVFQQPVIFLGADV 637

  Fly   723 THPPAGDNKKPSIAAVVGSMDAHPSRYAATVRVQQHRQEIIQELSSMVRELLIMFYKSTGGYKPH 787
            |||||||.|||||||||||||||||||.||||||||||:|||:|::|||||||.||||| .:||.
Zfish   638 THPPAGDGKKPSIAAVVGSMDAHPSRYCATVRVQQHRQDIIQDLATMVRELLIQFYKST-RFKPT 701

  Fly   788 RIILYRDGVSEGQFPHVLQHELTAIREACIKLEPEYRPGITFIVVQKRHHTRLFCAEKKEQSGKS 852
            |||.||||:|||||..||||||.||||||||||.:|:|||||:||||||||||||.::.|:.|||
Zfish   702 RIIYYRDGISEGQFNQVLQHELLAIREACIKLEKDYQPGITFVVVQKRHHTRLFCMDRNERVGKS 766

  Fly   853 GNIPAGTTVDVGITHPTEFDFYLCSHQGIQGTSRPSHYHVLWDDNHFDSDELQCLTYQLCHTYVR 917
            ||||||||||..||||.|||||||||.||||||||||||||||||||.|||||.|||||||||||
Zfish   767 GNIPAGTTVDTKITHPFEFDFYLCSHAGIQGTSRPSHYHVLWDDNHFTSDELQVLTYQLCHTYVR 831

  Fly   918 CTRSVSIPAPAYYAHLVAFRARYHLVEKEHDSGEGSHQSGCSEDRTPGAMARAITVHADTKKVMY 982
            ||||||||||||||||||||||||||:|||||.||||.||.|..|...|:|:|:.:|.||.:.||
Zfish   832 CTRSVSIPAPAYYAHLVAFRARYHLVDKEHDSAEGSHTSGQSNGRDQQALAKAVQIHQDTLRTMY 896

  Fly   983 FA 984
            ||
Zfish   897 FA 898

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
AGO1NP_001246314.1 ArgoN 146..275 CDD:406799 77/129 (60%)
ArgoL1 285..335 CDD:400854 42/49 (86%)
PAZ_argonaute_like 336..456 CDD:239212 100/119 (84%)
Piwi_ago-like 502..942 CDD:240015 342/450 (76%)
ago2XP_009292643.1 PLN03202 26..897 CDD:215631 641/873 (73%)
ArgoN 42..180 CDD:293095 81/137 (59%)
ArgoL1 191..240 CDD:285861 41/48 (85%)
PAZ_argonaute_like 241..361 CDD:239212 100/119 (84%)
Piwi_ago-like 406..856 CDD:240015 342/451 (76%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C170592717
Domainoid 1 1.000 530 1.000 Domainoid score I273
eggNOG 1 0.900 - - E1_KOG1041
Hieranoid 1 1.000 - -
Homologene 1 1.000 - - H81825
Inparanoid 1 1.050 1299 1.000 Inparanoid score I154
OMA 1 1.010 - - QHG58336
OrthoDB 1 1.010 - - D159407at2759
OrthoFinder 1 1.000 - - FOG0000468
OrthoInspector 1 1.000 - - otm25237
orthoMCL 1 0.900 - - OOG6_100361
Panther 1 1.100 - - LDO PTHR22891
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R3246
SonicParanoid 1 1.000 - - X379
SwiftOrtho 1 1.000 - -
TreeFam 1 0.960 - -
ZFIN 00.000 Not matched by this tool.
1716.800

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