DRSC/TRiP Functional Genomics Resources

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Protein Alignment AGO1 and wago-10

DIOPT Version :9

Sequence 1:NP_001246314.1 Gene:AGO1 / 36544 FlyBaseID:FBgn0262739 Length:984 Species:Drosophila melanogaster
Sequence 2:NP_503177.1 Gene:wago-10 / 178560 WormBaseID:WBGene00020707 Length:990 Species:Caenorhabditis elegans


Alignment Length:1006 Identity:213/1006 - (21%)
Similarity:380/1006 - (37%) Gaps:218/1006 - (21%)


- Green bases have known domain annotations that are detailed below.


  Fly    76 PTAVTSPSAQNVAAGGATVAGAAATAAQVASALGATTGSVTPAIATATP-----ATQPDMPVFTC 135
            ||.|.:||                           .||.: |.|....|     :::.|:|....
 Worm     2 PTTVQNPS---------------------------PTGFL-PQIPFRIPKRTRRSSEVDVPATKR 38

  Fly   136 PRRPNLGREGRPI-----VLRANHFQVTMPRGYVHHYDINIQPDKCPRKVNREIIETMVHAYS-K 194
            |..|.......|.     ::.....|:.|       :.:||  ...|||:.|..::|::...: |
 Worm    39 PAPPLTSSTSLPTRDSFSIIETRDVQLNM-------FALNI--SGMPRKIQRFHVDTLIKGKNGK 94

  Fly   195 IFGVLKPV----------------------------------------FDGRNNLYTRDPLPIGN 219
            ||.|...|                                        :|..|.||..|.:.:| 
 Worm    95 IFNVNHGVLANSGDINSHNKRLAQHALMQKFHKKRRELFGQHDYHILAYDCANTLYLPDGVYLG- 158

  Fly   220 ERLELEVTLPGEG---------------KDRIFRVTIKWQAQVSLFNLEEALEGRTRQIPYDAIL 269
             |.|.|.|...:.               ||..:.:.|:....:.... |||.|...|.   :...
 Worm   159 -RNEEECTFKSDDFSPEQWNITSKLSRKKDYTYVMKIRPSGFIYTSG-EEASEVANRM---ELTR 218

  Fly   270 ALDVV-MRHLPSMTYTPVGRSFFSSPEGYYHPLGGGREVWFGFHQ-----SVRPSQWKMMLNIDV 328
            .:::| .:.|.:..|...|...||.............|:..||.:     ..|..:.:|::.||.
 Worm   219 CVEIVTSQKLNNSDYCQFGNDTFSFRAQPVSEPDATSEIRSGFAKVSRIVEGRNGKNEMLMAIDT 283

  Fly   329 SATAFYKAQPVIDFMC------------------------------EVLDIRDINEQRKPLT-DS 362
            .|:.|||:..|::|:|                              :..|.:|:.|..:.|. ..
 Worm   284 KASPFYKSTSVLNFVCGKYLEKRGSSRNDYRGRGDYNRKKTGGGSTDAPDHQDVAEVERSLEYRE 348

  Fly   363 QRVKFTKEIKGLKIEITHCGQMRRKYRVCNVTRRPAQMQSFPLQLENGQTVECTVAKYFLDKYRM 427
            .|.:..:.:|||.:...|.........:..|....::...|  ...||:. |.:||.::|:.|..
 Worm   349 NRQQIEEALKGLLVSAAHLKNSTNLIMISRVAETNSETTKF--MTNNGER-EISVADHYLEAYNY 410

  Fly   428 KLRYPHLPCLQVGQEHKHTYLPLEVCNIVAGQRCIKKLTDMQTSTMIKATARSAPDREREI--NN 490
            :|:||.:|.:...:.....:.|:|:..:..|||.............:|....:.|.:..::  :.
 Worm   411 RLKYPKMPLVVSKRFRDECFYPMELLQVAPGQRIKDHKMSAAVQMAMKGQKSTLPQKHVDLVKHV 475

  Fly   491 LVKRADFNNDSYVQEFGLTI-SNSMMEVRGRVLPPPKLQYGGRVSTGLTGQQLFPPQ-------- 546
            |.:....:.:.|:..||:.: |..:::::.::||||::::...|.....|..:|...        
 Worm   476 LSRNLKLDRNLYMDAFGIKLESAELVKLQSKILPPPQIKFKDEVYMPKMGNPVFRTNGRFVDPAD 540

  Fly   547 -NKVSLASPNQGVWDMRGKQFFTGVEIRIWAIACFAPQRTVREDALRNFTQQLQKISNDAGMPII 610
             |.|::...::.: |||..:.|..      .::|:.     ||:.:     .::|.|.|  .|| 
 Worm   541 INAVAIVVFDRAI-DMRQAENFCD------RLSCYC-----RENGI-----TVKKSSRD--WPI- 585

  Fly   611 GQPCFCKYATGPDQVEPMFRYLKITFPGLQLVVVVLPGKTPVYAEVKRVGDTVLGMAT--QCVQA 673
                  :.....|.|.......|....|:.::|.:...|.|...:|.:..:..:|:.|  .|.|.
 Worm   586 ------REINSEDSVAIKNAMEKWFSKGVNILVAIAKEKKPDVHDVLKYYEASVGLQTIQVCKQT 644

  Fly   674 KNVNKTS--PQTLSNLCLKINVKLGGIN-SILVPS-------------IRPKVFNEPVIFLGADV 722
            .::..:|  .||..|:..|.|:|.||.| .:.:|.             :..|:| |.|.|:|.|:
 Worm   645 VDMMLSSGGRQTADNVMRKFNLKCGGTNFFVQIPRSVNGRTVCADAHLLNEKLF-ERVQFIGFDI 708

  Fly   723 THPPA------GDNKKPSIAAVVG---SMDAHPSRYAATVRVQQHRQEIIQELSSMVRELLIMFY 778
            :|..:      ...|.....::||   |: :|.:.......:|..::..:|:|..:..: .:..|
 Worm   709 SHGASRTLFDRSTGKMDGEVSIVGVSYSL-SHSTHLGGFAYMQTQKEYKLQKLDEVFPK-CVDSY 771

  Fly   779 KSTGGYKPHRIILYRDGVSEGQFPHVLQHELTAIREACIKLEPEYRPGITFIVVQKRHHTRLFCA 843
            ::..|..|.:|::||.|..||.|..| :.|:..||....:::|:|||.:..|:.|:..|.|:|.|
 Worm   772 RNHTGRLPSKIVIYRIGAGEGDFKRV-KEEVDKIRGTFNRIQPDYRPQLVVIIAQRDSHVRVFPA 835

  Fly   844 EKKEQSGKSGNIPAGTTVDVGITHPTEFDFYLCSHQGIQGTSRPSHYHVLWDDNHFDSDELQCLT 908
            ..........|:.:||.||..||.....:|.|.|...:.||.||..|.:|.:|.::...|:..||
 Worm   836 HITGSKAGQQNVTSGTCVDSVITSLGHQEFILSSQMPLLGTVRPCKYTILTNDPNWTKTEITHLT 900

  Fly   909 YQLCHTYVRCTRSVSIPAPAYYAHLVAFRAR 939
            |.....:....:..|.|...|.|..:|.|.|
 Worm   901 YFRAFGHQVSYQPPSFPDVLYAAENLAKRGR 931

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
AGO1NP_001246314.1 ArgoN 146..275 CDD:406799 34/190 (18%)
ArgoL1 285..335 CDD:400854 12/54 (22%)
PAZ_argonaute_like 336..456 CDD:239212 27/150 (18%)
Piwi_ago-like 502..942 CDD:240015 116/475 (24%)
wago-10NP_503177.1 PAZ_argonaute_like 347..439 CDD:239212 20/94 (21%)
ArgoL2 478..515 CDD:293097 8/36 (22%)
Piwi-like 499..932 CDD:239208 112/463 (24%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG1041
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR22891
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
43.910

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