DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment shot and si:ch211-137a8.2

DIOPT Version :9

Sequence 1:NP_725339.1 Gene:shot / 36542 FlyBaseID:FBgn0013733 Length:8805 Species:Drosophila melanogaster
Sequence 2:NP_001315020.1 Gene:si:ch211-137a8.2 / 777613 ZFINID:ZDB-GENE-061103-172 Length:632 Species:Danio rerio


Alignment Length:688 Identity:134/688 - (19%)
Similarity:216/688 - (31%) Gaps:244/688 - (35%)


- Green bases have known domain annotations that are detailed below.


  Fly  6100 REAVDRHTRLQTCMEHCKK--YSQTSETFL--------------------AWLRTAEDKLADLTP 6142
            ||..:......||:|..:.  |.|:|||..                    .||     .:.||:|
Zfish    21 RERDEDREEKPTCVEMNQNGLYLQSSETCCPTTSSKPYDDDDDDLNEFSNEWL-----SIGDLSP 80

  Fly  6143 GVLSK----AKLETRLRDLQTFRSEVWKHSGEFENTKGLGETFLSSCDIDKEPIKAELQDIRDRW 6203
            .|...    .|||.|           |....||:..       |||               .|.|
Zfish    81 DVSFSLEGCVKLEKR-----------WMLWHEFKKD-------LSS---------------MDEW 112

  Fly  6204 ERLNNDLIA---RAHEIENCSRRLDDFNDELRNLDHSLGRCEDRLAAHDALGGAAKDPKLLERVK 6265
            .|....:.|   .:|.:...::      ||||..::.......||...|.               
Zfish   113 LRSAEKIAASPNSSHVLYKTAK------DELRKYENLRAEARMRLTQLDC--------------- 156

  Fly  6266 AIREELTNLSKPLQSL--KALAKDISAEARAAGGDADHLTSEVDGLADRMSELQGRLDDRCGELQ 6328
                 ||..|:.|..|  .|:...:....:..|...|.|::.::.:..|:..|.|:.:|      
Zfish   157 -----LTQRSRALHGLFRGAMGARLVEMTKDCGERWDQLSNTLETVCRRLKHLVGQRED------ 210

  Fly  6329 SAATAVSQFNEQMKSLGIDLNDLE---TEIEKLSPPGREIKIVQVQIDDVGKIQTKLDRLVGRLE 6390
                    |..|.:.:.:.|.|::   ||:|..|......|:.|:|     ..|..:....|||.
Zfish   211 --------FERQREEMAVWLADMDLRLTEVEHFSGKDTCSKMHQLQ-----GFQEAVGESAGRLN 262

  Fly  6391 DAERAADVLVDAGFAADTTQTREQISTLR-------KTLGRLDNRVRDHEDNLHSTLKALREFYD 6448
            |..:..:.|:.....||......|:..|.       :.|||           ||:.|.::|..::
Zfish   263 DLLQRGEELIQRSEPADAQAIESQLQELLLHCTHVFQALGR-----------LHTRLLSMRLVFE 316

  Fly  6449 HQ-----------SQTLDDIQDVSDEFKRMKPVGSELDQIRRQQEDFRNFRERKVEPLAINVD-K 6501
            ..           |::|  ::|.....|.|.|                 |.:...:.|.:..| .
Zfish   317 EDWALCSPDSGCPSESL--LEDEGFMEKIMAP-----------------FPQSSHDQLVLEWDPS 362

  Fly  6502 VNVAGR-------DLVRSAGSGV-STTAIEKDLEKLNDRWNDLKERMNERDRRLDVALLQSGKFQ 6558
            |::.|.       ....||.:|| ||....|         |.|::|         |.:.|.|.  
Zfish   363 VDIGGSISHDDTDSSSFSAAAGVFSTDESAK---------NPLRKR---------VCIKQPGH-- 407

  Fly  6559 EALAGLSKWLSDTEEMVANQKPPSSDYKVVKA-------QLQ----EQKFLKKMLLDRQNSMGSL 6612
                         |:.:....||.:...|::|       |.|    |.:..:.:..|.:.....|
Zfish   408 -------------EKSLDRAAPPQTPVPVIRAGRPQFAGQFQTSTPEIRSPELLTFDPERISAWL 459

  Fly  6613 AN----LGKEVANHCEPGERASIEKQLNDLMKRFDALTDGAEQRELDLEEAMEVAKRFHDKISPL 6673
            ..    ..|.:....:|..|:|           |.:|..|.|.:|   ||..|..:..|....|.
Zfish   460 GQTHQVCTKAIQTEHDPQPRSS-----------FSSLPSGKEDKE---EEGFEYQENVHHPPRPT 510

  Fly  6674 ELWLDNTERSVKAMELIPTDEEKIQQRIREHDRLHDEI 6711
            ...|    .|.::.:|    :..:|||.::..|..:.:
Zfish   511 CANL----HSSQSCDL----QHHLQQRHQDPQRQQERL 540

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
shotNP_725339.1 SAC6 204..>420 CDD:227401
CH 223..327 CDD:306753
SPEC 471..689 CDD:238103
SPEC 690..866 CDD:238103
SH3 885..922 CDD:327375
SPEC 1047..1250 CDD:238103
SPEC 1153..1390 CDD:238103
PLEC <1498..1526 CDD:197605
Plectin 1949..1981 CDD:307019
DNA_pol3_delta2 <2711..3178 CDD:331068
DUF4775 3026..3357 CDD:330579
SMC_N <4904..5566 CDD:330553
SPEC 5304..5513 CDD:238103
SPEC <5658..5787 CDD:321951
SPEC 5793..6007 CDD:238103
SPEC 6011..6220 CDD:238103 31/148 (21%)
SPEC 6118..6330 CDD:238103 46/242 (19%)
PRK09039 <6279..6441 CDD:332967 35/173 (20%)
SPEC 6443..6660 CDD:238103 46/251 (18%)
SPEC 6663..6878 CDD:238103 9/49 (18%)
SPEC 6880..7087 CDD:238103
SPEC 6986..7196 CDD:238103
SPEC 7196..7417 CDD:238103
SPEC 7314..7526 CDD:238103
SPEC 7528..7747 CDD:238103
SPEC 7749..7968 CDD:238103
SPEC 7973..8181 CDD:238103
EF-hand_7 8373..8437 CDD:316058
GAS2 8450..8522 CDD:128539
Herpes_ICP4_C 8550..>8795 CDD:332854
si:ch211-137a8.2NP_001315020.1 SPEC 98..308 CDD:238103 56/287 (20%)
KASH <597..632 CDD:287506
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E2759_KOG0516
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
21.810

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