DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment shot and macf1b

DIOPT Version :9

Sequence 1:NP_725339.1 Gene:shot / 36542 FlyBaseID:FBgn0013733 Length:8805 Species:Drosophila melanogaster
Sequence 2:XP_695869.5 Gene:macf1b / 567481 ZFINID:ZDB-GENE-100922-36 Length:2086 Species:Danio rerio


Alignment Length:2146 Identity:631/2146 - (29%)
Similarity:1072/2146 - (49%) Gaps:267/2146 - (12%)


- Green bases have known domain annotations that are detailed below.


  Fly  6505 AGRDLVRSAGSGVSTTAIEKDLEKLNDRWNDLKERMNERDRRLDVALLQSGKFQEALAGLSKWLS 6569
            |..:|......|.|::    |.|...|:|.|.:..:..:|...|:.     .|||.|..|..|:.
Zfish   180 AAEELAELQSDGQSSS----DQESSLDQWKDGRSTLALKDAFKDLK-----AFQENLETLMTWVC 235

  Fly  6570 DTEEMVANQKPPSSDYKVVKAQLQEQKFLKKMLLDRQNSMGSLANLGKEVANHCEPGERASIEKQ 6634
            :.||:.||||||||::|||||||||||.|:::|.||:.||..:...|..:|...:..:....:.|
Zfish   236 EIEELTANQKPPSSEFKVVKAQLQEQKLLQRLLEDRRASMERMIQEGPPLAEELQGKDSEKTKVQ 300

  Fly  6635 LNDLMKRFDALTDGAEQRELDLEEAMEVAKRFHDKISPLELWLDNTERSVKAMELIPTDEEKIQQ 6699
            |..|..::::|..||..|...||..:.:|:.|.::...|:.|            ||..|::..:.
Zfish   301 LAQLKLKWESLLQGATSRHKILEVILPMAQLFQERTDRLQQW------------LISVDQDLAEL 353

  Fly  6700 RIREHDRLHDEILGKKPDFSDLADVTAQLMHLVSDEEAVNLGEKVRGVTERYTGLVDASDNIGAL 6764
            |..|...||                                             |.:|:....|:
Zfish   354 RSAERAMLH---------------------------------------------LQEATGQAKAV 373

  Fly  6765 LAESRQGLRHLVLSYQDLVAWMESMEAELKRFKSVPVYAEKLLEQMDHLLELNENIAGHASNVES 6829
            :.|                  :::..|:|.:           |:|..|                 
Zfish   374 MEE------------------IKAKSADLGK-----------LQQCAH----------------- 392

  Fly  6830 TVESGAELMKHISNDEAIQLKDKLDSLQRRYGDLTNRGGDLLKSAQNALPLVQQFHEAHNRLVEW 6894
                  |||:.||.:|...:::::|||:.||..::....|:|:..:.||       ||.:|....
Zfish   393 ------ELMEKISEEETQLVQERVDSLRIRYSVMSLGSADVLQRLEQAL-------EASSRCTSS 444

  Fly  6895 MQSAEAALAPSEPRQADVLRLEGELADMRPILDSINQVGPQLCQLSPGEGAATIESIV-TRDNRR 6958
            .:.....|.          |:|.||                   |.|...:.|.:::: :.:.::
Zfish   445 QEDLHLWLG----------RIEREL-------------------LVPAAQSQTGDAVLCSSERQK 480

  Fly  6959 FDSIVEQIQRKAERLHLSNQRAKEVTGDIDELLEWFREMDTTLREADLPAMEPKLVRAQLQEHRS 7023
            .|..||                ||        |.||::....|.|.....:.|.::.:||.|.::
Zfish   481 LDQAVE----------------KE--------LAWFKDTSLALEELRTINLHPDIIVSQLNEQKN 521

  Fly  7024 INDDISSQKGRVRDVTAASKKVLRESPQSENTATLREKLDDLKEIVDTVAQLCSERLGILEQALP 7088
            :..:|...|..:..: |...::|:...:.|.|..|:..||.|:|.........:..:..||.|..
Zfish   522 LAVEILQHKFNIEKM-AKILELLQTYTEDEETLRLQSSLDTLQEQCQVTTATNAHVVLQLEHAQS 585

  Fly  7089 LSEHFADSHQGLTAWLDDMEQQISRLSMPALRPDQITLQQDKNERLLQSIAEHKPLLDKLNKTGE 7153
            |...|::.:..:..||.:.:..|.:.::..:..:....|||..:...:||||||||:.:|....:
Zfish   586 LLSQFSEGYAEVLPWLQETKALIGQFTLNTISYEAFREQQDLLQGARESIAEHKPLIARLIMLAQ 650

  Fly  7154 ALGALVADDDGAKINEILDTDNARYAALRLELRERQQALESALQESSQFSDKLEGMLRALANTVD 7218
            .|..|.|.......::..||:. ::.|:|..:||....||.:|...:|.::::..:...|.:...
Zfish   651 RLSDLNAVQGQEFCHKARDTEE-QHLAIRERVREAAAVLEESLPRYTQLNERMTVIGERLEHLCS 714

  Fly  7219 QVNQLDPLSALPQKIREQIEDNDALMDDLDKRQDAFSAVQRAANDVIAKAGNKADPAV-RDIKAK 7282
            .:..|..|..|..:|:||::||...:.:|.|.....|:||..:.::::.||.....:: ..|:.:
Zfish   715 HLQALSALQGLTPRIQEQLQDNKHTLTELSKLDLDLSSVQTQSQELLSSAGAVGGTSIGTAIQER 779

  Fly  7283 LEKLNNLWNDVQNATKKRGSSLDDILSVAEPFWKQLNSVMKTLKDLEETLSCQEPPAAQPQDIKK 7347
            :..|.:.|.:.|...::|...|.::|.:|..||..::.|...|.|.::.:.......:..:.|::
Zfish   780 VCCLTSRWEEAQKQAREREKWLLNLLDLAVRFWNDVSDVTAGLNDAQQAVLDLNSNRSDSETIRQ 844

  Fly  7348 QQVALQEIRHEIDQTKPEVEQVRRHGSNLMNMCGEPDKPEVKKHIEDLDNAWDNITALYAKREEN 7412
            ....:|.:|.:||..:.::|.:...|..||:.||:.|||||.|.:::|...|:|::.::.:....
Zfish   845 SLETMQTLREDIDSLQGDLETLGILGMELMSACGDTDKPEVTKCLDELYGTWNNLSKIWTECNSK 909

  Fly  7413 LIDAMEKAMEFHETLQNLLKFLTKAEDKFAHLGAVGSDIDAVKRQIEQLKSFKDEVDPHMVEVEA 7477
            |.:.:..|:.:.:::|.|.::|..||.|.....:||||:.:||.|:..||.||.|:....:|:|:
Zfish   910 LEECLRMALHYQDSMQGLFQWLKSAELKSTEEFSVGSDLGSVKEQLCDLKEFKRELYQKKIEIES 974

  Fly  7478 LNRQAVELTERTSP--EQAASIREPLSVVNRRWEALLRGMVERQKQLEHALLHLGQFQHALNELL 7540
            ||.:.|   .|.||  |:..|: .||....:||::|....|.:|.|||.|||.|||||:.|:||.
Zfish   975 LNHRFV---CRLSPGTERPGSV-SPLCDFRQRWDSLESETVSKQHQLECALLGLGQFQNTLDELH 1035

  Fly  7541 VWINKTDSTLDQLKPIPGDPQLLEVELAKLKVLANDIQAHQNSVDTLNDAGRQLIETEKGSVEAS 7605
            .|:..|...|...:||..|.|..|:||||.|||.||:.:|.::||:||.|||.|:|:..|.. :.
Zfish  1036 AWLLHTADLLQASQPISIDLQTCEIELAKHKVLRNDVMSHVHTVDSLNRAGRSLMESGAGDT-SH 1099

  Fly  7606 TTQEKLRKLNNEWKQLLQKASDRQHELEEALREAHGYIAEVQDILGWLGDVDAVIGASKPVGGLP 7670
            ..|.:|.:||..|:.:..:...||.|||..|.:......|:||:|.||...|..:.:||.|.|:|
Zfish  1100 VLQTRLEQLNERWEFVRCETERRQLELENNLSQVQDVSMEIQDLLQWLEHTDLRLSSSKAVWGMP 1164

  Fly  7671 ETATEQLERFMEVYNELDENRPKVETIQAQGQEYIKRQNQMKVSSSNLQHTLRTLKQRWDAVVSR 7735
            ::::|:|...:|:.||:|........:::.....::.....:.||:  :|:|..|:|:|.||.::
Zfish  1165 DSSSERLNAHLELCNEMDSKMHAYTNVRSAIHRMLEASEVARGSST--EHSLCILEQKWSAVYAK 1227

  Fly  7736 ASDKKIKLEIALKEATEFHDTLQAFVEWLTQAEKLLSNAEPVSRVLETIQAQMEEHKVLQKDVST 7800
            ..::|.||...|..|.||:..:|..:..:.:.|:.::.....|.:|:||.:|::||:||..:|.:
Zfish  1228 MQERKAKLTEGLGLAKEFNSNVQDLLTKMGKCEETINTLSAPSFILDTICSQLQEHRVLVSEVQS 1292

  Fly  7801 HREAMLLLDKKGTHLKYFSQKQDVILIKNLLVSVQHRWERVVSKAAERTRALDHGYKEAREFNDA 7865
            :.:....::...|.|...|:|:|..:|:||::::|.|:::::....||.:.|:...:.|::|:::
Zfish  1293 YGDRKSSVEAAATRLSELSRKEDCDVIQNLIMTIQDRFKKLLQHTTERGKTLEDAKRLAKQFSES 1357

  Fly  7866 WSGMMQYLQETEQVLDQIIEEATASKEPQKIKKYIGKLKETHRQLGAKQSVYDGTMRTGKNLLER 7930
            |..::.::.|.||.||...|.|.:.:|   ||:.:.:.|:..:.|.:|:.:|:..:::|::|.|:
Zfish  1358 WHLLVDWMTEVEQTLDTHKEIAVSQEE---IKQQLTEQKDFQKLLRSKRPMYEACLKSGRSLQEK 1419

  Fly  7931 APK-GDRPVLDKMLIELKEQWTRVWSKSIDRQRKLEEALLLSGQFSDALGELLDWLKKAKSRLNE 7994
            |.. .|...|:.|:.||::.|..:..||.:||.|||||||.||:|:|||..|.|||.:|:.:|.|
Zfish  1420 AQSPADTQQLENMVSELRDSWDTISGKSSERQHKLEEALLFSGRFTDALQALSDWLFRAEPQLAE 1484

  Fly  7995 NGPVHGDLETVQGLCEHHKHIEQDLQKRAAQMQGVLKTGRDLERSGNNPE--VGRQLDEMQSIWE 8057
            :.||.|:.:.|..|.:.||..:::|.|||:.::.:.::.|||.||.....  :..|::|::|.||
Zfish  1485 DVPVCGEKDLVNNLIDKHKVFQRELGKRASCIRTLKRSVRDLTRSSTADAHWLQEQMEELESRWE 1549

  Fly  8058 EVKSAVAKRGERLQVALVDAEKLNARVQALFDWLDHAEHKLRYAKNAPDDEKVSREMMDIHMDFM 8122
            .|......|..||:.||..||:.:..|.:..|.|...|..|:|.. .|::|:........|.:.|
Zfish  1550 AVCKLSVSRQARLEAALQQAEEFDGVVHSFLDQLSDVERVLKYGV-LPEEEEALLAFRTCHQESM 1613

  Fly  8123 KDLRVREREKTETFEYAEDIINKAYPDAIPIIKNWLSIIQQRWEEVRQWAINRESKLEQHLQSLK 8187
            ..|..::..........|:|:...:||::..||:|:||...|:|||:.||..:..:::..|.:|:
Zfish  1614 SSLNAQQEALENIRSLGEEILRCCHPDSVITIKSWISITNTRYEEVQTWAKQQAERIQISLAALQ 1678

  Fly  8188 DLDDTIEELLAWLSGLEGTLLNLKHEQLPDEIPPVEKLIEDHKEFMENTARRQNEVDRA---CKP 8249
            ...:.|:.:|.|:...|.:|...:.|.||:::....:||..|.:||:....:..||:.|   ||.
Zfish  1679 GEREQIQRILDWICAAEDSLSLKEQESLPEDLELTAELITQHMDFMDEMKGKVPEVENATKSCKH 1743

  Fly  8250 RQLPPGARKPSRSGKTPVFKGSRDQGLNARKGSRITPTRDTPDRDRLPHYGPRFSPSTSGP--EL 8312
            :.:|.....|||   .|..|         |:|:...|                  ||...|  :|
Zfish  1744 KLVPKQQVSPSR---RPAAK---------RRGAAKPP------------------PSVPVPLEKL 1778

  Fly  8313 EFRSPRAKLLWTKWRDVWMLSWERQRLLNDHLLYLKDVERARNFSWDDWRKRFLKYMNHKKSRLT 8377
            :.::|....|...||.:|:.:..||..|.:||..|:::|...||.::.||||::::::|.|||:.
Zfish  1779 DPQTPIMCRLVKDWRKLWLQAHGRQSRLEEHLQRLRELEEFANFDFNIWRKRYMQWISHLKSRIL 1843

  Fly  8378 DLFRKMDKDNNGMIPRDVFIDGILNTKFDTSGLEMKAVADLFDRNGEGLIDWQEFIAALRPDWQE 8442
            |:||.:|:|.:|.|....|||.:|.:||.|:.|||.|||::||.||:|.||:.||::||.|....
Zfish  1844 DVFRSIDRDQDGRITHKEFIDSVLASKFPTNVLEMTAVANIFDVNGDGFIDYYEFVSALHPSRDP 1908

  Fly  8443 RKPANDSDKIHDEVKRLVMLCTCRQKFRVFQVGEGKYRFGDSQKLRLVRILRSTVMVRVGGGWVA 8507
            .:...|.|:|::||.|.|..|.|.::|:|.|:...:|||||||:||:|||||||:||||||||.|
Zfish  1909 YRRTVDIDQINEEVSRQVSQCNCPKRFQVEQISANRYRFGDSQQLRMVRILRSTLMVRVGGGWTA 1973

  Fly  8508 LDEFLQKNDPCRAKGRTNIELREQFILAD-----GVSQSMAAFTPRRSTPN----AAATASSSPH 8563
            |||||.||||||.|||||::::|:::..|     |...|....|..||..:    ::|:|.|||.
Zfish  1974 LDEFLVKNDPCRVKGRTNLKIKEKYLSRDAFETSGRRGSAKGLTVSRSNSSLSLYSSASAPSSPL 2038

  Fly  8564 AHNGGSSNLPPYMSGQGPIIKVRERSVRSIPMSRPSRSSLSA-------STPDSLSDNEGSHGGP 8621
            ..   .:.|....||        ||.||       .|||::|       :..||.|..|.:...|
Zfish  2039 TR---KALLRRSFSG--------ERCVR-------PRSSIAALGSDHFCADIDSPSPTEEAERPP 2085

  Fly  8622 S 8622
            :
Zfish  2086 T 2086

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
shotNP_725339.1 SAC6 204..>420 CDD:227401
CH 223..327 CDD:306753
SPEC 471..689 CDD:238103
SPEC 690..866 CDD:238103
SH3 885..922 CDD:327375
SPEC 1047..1250 CDD:238103
SPEC 1153..1390 CDD:238103
PLEC <1498..1526 CDD:197605
Plectin 1949..1981 CDD:307019
DNA_pol3_delta2 <2711..3178 CDD:331068
DUF4775 3026..3357 CDD:330579
SMC_N <4904..5566 CDD:330553
SPEC 5304..5513 CDD:238103
SPEC <5658..5787 CDD:321951
SPEC 5793..6007 CDD:238103
SPEC 6011..6220 CDD:238103
SPEC 6118..6330 CDD:238103
PRK09039 <6279..6441 CDD:332967
SPEC 6443..6660 CDD:238103 55/154 (36%)
SPEC 6663..6878 CDD:238103 33/214 (15%)
SPEC 6880..7087 CDD:238103 38/207 (18%)
SPEC 6986..7196 CDD:238103 51/209 (24%)
SPEC 7196..7417 CDD:238103 52/221 (24%)
SPEC 7314..7526 CDD:238103 65/213 (31%)
SPEC 7528..7747 CDD:238103 77/218 (35%)
SPEC 7749..7968 CDD:238103 63/219 (29%)
SPEC 7973..8181 CDD:238103 66/209 (32%)
EF-hand_7 8373..8437 CDD:316058 33/63 (52%)
GAS2 8450..8522 CDD:128539 47/71 (66%)
Herpes_ICP4_C 8550..>8795 CDD:332854 22/84 (26%)
macf1bXP_695869.5 SPEC 219..435 CDD:238103 78/329 (24%)
SPEC 586..805 CDD:295325 52/219 (24%)
SPEC 810..1021 CDD:238103 65/214 (30%)
SPEC 1024..1237 CDD:238103 77/215 (36%)
SPEC 1139..1347 CDD:238103 59/209 (28%)
SPEC 1350..1566 CDD:238103 76/218 (35%)
SPEC 1463..1671 CDD:238103 66/208 (32%)
EFh 1841..1903 CDD:238008 31/61 (51%)
EF-hand_7 1842..1902 CDD:290234 29/59 (49%)
GAS2 1919..1986 CDD:280367 44/66 (67%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 1 1.000 105 1.000 Domainoid score I6596
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D17559at33208
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
32.920

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