DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment shot and tecta

DIOPT Version :9

Sequence 1:NP_725339.1 Gene:shot / 36542 FlyBaseID:FBgn0013733 Length:8805 Species:Drosophila melanogaster
Sequence 2:XP_009300199.1 Gene:tecta / 561355 ZFINID:ZDB-GENE-110411-120 Length:2201 Species:Danio rerio


Alignment Length:1508 Identity:276/1508 - (18%)
Similarity:443/1508 - (29%) Gaps:617/1508 - (40%)


- Green bases have known domain annotations that are detailed below.


  Fly  1341 FSPPRRDLRPADSDPGATQ---------YYSQRLDNLNTKNDRLLE---QLSQRLKTAIEV---- 1389
            |.|..|||.....|.|::.         :::....:|...|:.::.   |:||....|..:    
Zfish    31 FGPAHRDLETPKMDDGSSPEIPLLIPFIFFNVPYRSLYVNNNGVISFNIQVSQFTPEAFPLSDSR 95

  Fly  1390 -----------NGSDG-LQYAESLQ---------------KPLKTF-----------RVDFSAGS 1416
                       ||..| :.|.||..               |.:.:|           :|.|..||
Zfish    96 SFIAPLWADVHNGIRGDVYYRESTDTEILERATQDVRKYFKNMVSFTATWVFITTWNQVTFYGGS 160

  Fly  1417 VPT----------GDGYAARQEDLYTTTYSTTQISSTKTTKSSTKSVYSSDGLDAASQEVSTAG- 1470
            ..|          .||:|      |.:.::..:|      ..||.:....|.|.......:.|| 
Zfish   161 QTTPVNTFQAVLISDGHA------YFSMFNYGEI------HWSTGTASGGDPLTGLGGTTAQAGF 213

  Fly  1471 ----------LPQSQIQFNEIRTLKRSQQLG--GHSVLDI-AGIRDPRT-----GRVLTIGEAIQ 1517
                      ||.|  :.||:..::::..:.  |.....| |...||..     ||....||...
Zfish   214 NGGDVSHFFNLPGS--RSNEVVNIEQTTNVNVPGRWFFRIDADQIDPANGCSYIGRFYRRGEVFW 276

  Fly  1518 L--------RILD--------------VRTGEMLVG------DRRITLEQAAD------------ 1542
            |        |.||              :.|.|.:.|      .|..|.....|            
Zfish   277 LSDQCTQRCRCLDLDNEVICHETPCGQLETCEQVEGAYYCQPTRTSTCVVFGDPHYHTFDGFLYH 341

  Fly  1543 -QGLIDLQLAKQLLE-PGAGRDASGRELSLLEVIQREISEAESGYETA----EKRIKV-NNTVTV 1600
             ||.....||:...| ||            |.....|......|..|.    :..::| |:.||:
Zfish   342 FQGTCSYLLARPCWEMPG------------LPFFSVEAKNENRGVPTVSWLRDVTVEVYNHRVTL 394

  Fly  1601 EQTSGELGSPENPRNIADAITAGSVDTKTGLYRV-KSGQTISLAEAYERGYLIRHE-----SVTI 1659
            .:  |.||:.:    :...|....|..:.|..:| :||..::|...:  |.|:.::     |:::
Zfish   395 PK--GTLGTVQ----VDGLIKTLPVQLQLGAVKVYQSGVAVALETDF--GLLVTYDGLHYASISL 451

  Fly  1660 KSN------ALC------------LSD-AIAHGLVD-GAGWIADRNSGDKFRLDSAIANQ----- 1699
            .|:      .||            |.| ::|..:|: |..|.|:...   ||.....|..     
Zfish   452 PSSYFNNTCGLCGNYNDDPADDPVLPDGSLAESVVELGGSWRAEDTD---FRCTDGCAQNCSMCE 513

  Fly  1700 --------------LIDAS------VREVVD-------------AKRDTKITLQEALQSGVLNAK 1731
                          ||:.:      .|.|||             :.||...||.:|:|:..|..:
Zfish   514 PAAEAFYFRSDYCGLINKTDGPFRDCRAVVDPTAFVYSCVYDMCSNRDNITTLCQAIQAYALACQ 578

  Fly  1732 ----TGRYVNEVTKEKLTFAEARNRQLIVK--PYTLKDI---------------CDLNLLDKQAQ 1775
                |.|.....:...||..|..:.|:...  |.:..|:               ||      |..
Zfish   579 ALGVTIRPWRSRSFCALTCPENSHYQVCTSACPASCSDLTSHLYCAHPCTEGCQCD------QGY 637

  Fly  1776 ITSPMR----------REKL--SIMQAIEAGVLDGNLL------KCITKRKGELVTLQEAIADGI 1822
            :.|..|          |:.|  ::.:...||  :|..:      :|:....||:....::..:|.
Zfish   638 VLSGSRCVRRFECGCERDGLYYALNETFWAG--EGGEVGEDCSQRCVCGPAGEVKCFNDSCGEGE 700

  Fly  1823 VLPAECKYRDFMTGELISIPEAVERGLISSVAQRSIF-DIDG----FKDLRSNDYV--------- 1873
            |..||       .|.|...|   .|..|.|::|..|. ..||    |.| .|:.|:         
Zfish   701 VCAAE-------VGLLGCYP---RREAICSLSQSQILATFDGSTMPFPD-ESSFYLVKTLGRLPA 754

  Fly  1874 ---SFNVALSRDLLRRKSTGFALETGRDSLVPLEVAVSEGLVRQEVYEMFSRGIGVQNASGKELS 1935
               |..|.:.|.|:.:         |...|.|:.|.|  |.:..::             .|.:  
Zfish   755 NVTSVEVKIGRKLVNK---------GPTWLRPVVVRV--GHLEAQI-------------GGSD-- 793

  Fly  1936 VFDLVYHN-------LIDPKTGYLLDPKTGETVPLD-TAIERKFITPEGALLLSSLLNITLTTET 1992
             |||:..|       .:.|....::...:|.|..:: :.:.|...:.:|      ||||||:|..
Zfish   794 -FDLIKVNGEPAIVPYVHPVEPLMIYRSSGNTTVIEWSGLVRTRYSRQG------LLNITLSTLF 851

  Fly  1993 VTRTINRYVTIRAG--SQEPVDSVLLTFTEAVRQG-----FIDEERQL----------------- 2033
            ...|..     ..|  :.:|:|.:.|   .:.||.     ||:..|.:                 
Zfish   852 YNTTCG-----LCGFFNGDPIDDLRL---PSGRQADSADQFIESWRAIADDLTCNGDCEDLYRMC 908

  Fly  2034 --------------FKDPKTGNIYSVQQALN---------YGLLVPDSNQTV------------- 2062
                          ..||...:..:...|:|         |.:.|.:.|::.             
Zfish   909 TDLRQYQSPWLCGNINDPGNSSFLACHTAVNPSPFFRNCLYNMCVREGNRSALCNSLQAYASACQ 973

  Fly  2063 -------------------PEPTNRKKTKSTITIVTKQIIPEAEPIKLNTQHTKYVEKSVEIPIS 2108
                               ||.::..:..|...:....:....||..|                 
Zfish   974 DAQINLGTWRSATNCPLPCPENSHFDECTSACPLTCSNLDEPEEPCPL----------------- 1021

  Fly  2109 QELVKPHRVVSEFINLEKSSYIEQNVTERQIMELPPGGWRLKDAIEQRLFNPDTGVFHV------ 2167
                    ..||....|:                   |:.|:|.|  .:...|.|.|::      
Zfish  1022 --------PCSEGCQCEE-------------------GFALRDGI--CVARSDCGCFYLGRQLAT 1057

  Fly  2168 ----------------QGTDRLV--NFEECINKQII-NNLSLSVIDPNT---------------- 2197
                            .|||..|  .|..|..::.. .|..|....|.|                
Zfish  1058 NETFWTDWECQERCFCNGTDNSVYCTFSPCHPEEYCQENEGLFFCQPRTEAMCAVAGYAHFLPFG 1122

  Fly  2198 GDKISVQSAFERDIL---------DSYGNYTNSRKQVQGMRSAIDESKIILETVP----ATRGAN 2249
            |....:||:....:.         ||:|              .:|.::.:|..:|    :.|...
Zfish  1123 GVPFDLQSSCTLRLATTDCGEGDEDSFG--------------GLDSAETVLGGLPNFQLSVRNEE 1173

  Fly  2250 QKTILRITKVNNIPDV----LEVSTPLKDAPPKFVEVLTCQRELASPEPLQIAPGAIYDPSTALV 2310
            :.|...|.....:.:|    :|||.       .|...:|..:|... .||::.||.:        
Zfish  1174 RDTGQAIWVRGFVLEVYGYEIEVSR-------SFKHTVTVNKERLY-LPLKLGPGKV-------- 1222

  Fly  2311 IFTQTGETENIFDAARQGLVDEQLIKIVDPTTKQPISVTEAIARSIYDPKTATILDSEGQPVDLI 2375
                     ||:....|.||:                 |:...:..:|..|..:|.   .|..|.
Zfish  1223 ---------NIYTLGLQLLVE-----------------TDFGLKVAFDWNTLLLLT---LPRSLF 1258

  Fly  2376 TATKLGL---LSVVGAPLVAAEGALRTVRFVT---------DPRTG-------EQIPVEVAYERG 2421
            .|| .||   |.:.|..|...|..:......|         .||.|       .::|.:|....|
Zfish  1259 NAT-CGLCQGLPISGPALSVTEWGMAWADRDTFCQVGCGDSCPRCGLVERGLAAEVPAQVTDAVG 1322

  Fly  2422 IVSRDQLHRGRSF 2434
            .:..|..:.|..|
Zfish  1323 NIDMDNGNPGNRF 1335

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
shotNP_725339.1 SAC6 204..>420 CDD:227401
CH 223..327 CDD:306753
SPEC 471..689 CDD:238103
SPEC 690..866 CDD:238103
SH3 885..922 CDD:327375
SPEC 1047..1250 CDD:238103
SPEC 1153..1390 CDD:238103 13/75 (17%)
PLEC <1498..1526 CDD:197605 12/55 (22%)
Plectin 1949..1981 CDD:307019 4/32 (13%)
DNA_pol3_delta2 <2711..3178 CDD:331068
DUF4775 3026..3357 CDD:330579
SMC_N <4904..5566 CDD:330553
SPEC 5304..5513 CDD:238103
SPEC <5658..5787 CDD:321951
SPEC 5793..6007 CDD:238103
SPEC 6011..6220 CDD:238103
SPEC 6118..6330 CDD:238103
PRK09039 <6279..6441 CDD:332967
SPEC 6443..6660 CDD:238103
SPEC 6663..6878 CDD:238103
SPEC 6880..7087 CDD:238103
SPEC 6986..7196 CDD:238103
SPEC 7196..7417 CDD:238103
SPEC 7314..7526 CDD:238103
SPEC 7528..7747 CDD:238103
SPEC 7749..7968 CDD:238103
SPEC 7973..8181 CDD:238103
EF-hand_7 8373..8437 CDD:316058
GAS2 8450..8522 CDD:128539
Herpes_ICP4_C 8550..>8795 CDD:332854
tectaXP_009300199.1 NIDO 100..256 CDD:214712 32/169 (19%)
VWD 324..480 CDD:278521 34/175 (19%)
C8 519..594 CDD:214843 15/74 (20%)
TIL 597..650 CDD:280072 9/58 (16%)
VWD 717..875 CDD:214566 42/199 (21%)
C8 913..989 CDD:214843 7/75 (9%)
TIL 992..1046 CDD:280072 13/99 (13%)
VWD 1102..1265 CDD:295339 39/222 (18%)
C8 1349..1420 CDD:285899
TIL 1424..1477 CDD:280072
VWC 1479..1532 CDD:302663
VWD 1539..1690 CDD:278521
C8 1732..1803 CDD:214843
ZP 1850..2102 CDD:214579
Zona_pellucida 1982..2102 CDD:278526
FXa_inhibition 2132..2166 CDD:291342
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG1216
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
10.900

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