DRSC/TRiP Functional Genomics Resources

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Protein Alignment shot and Dyb

DIOPT Version :10

Sequence 1:NP_725339.1 Gene:shot / 36542 FlyBaseID:FBgn0013733 Length:8805 Species:Drosophila melanogaster
Sequence 2:NP_001097287.1 Gene:Dyb / 36362 FlyBaseID:FBgn0033739 Length:816 Species:Drosophila melanogaster


Alignment Length:546 Identity:96/546 - (17%)
Similarity:175/546 - (32%) Gaps:176/546 - (32%)


- Green bases have known domain annotations that are detailed below.


  Fly  2987 DKPDTLPQESNLPLEVESTSTLTTTTVTTITTSSTTTETGNLEPVVVEDVSTTVKEDKVVVKPST 3051
            |:..||...:. ...::|.|....||::.:..:|...|...|   :....:...:|::.   ||.
  Fly   362 DRSSTLDSRAT-GRSLDSASGTAGTTMSRVAAASANDEEHRL---IARYAARLAQENRA---PSN 419

  Fly  3052 VPEDKTEVSKIT-----ETITTVTSNETDTVPE--KISQKSASEESAKKDPVVTKDTSS---RPA 3106
            :|::.|.:....     |.|..:.|...:.:.|  ::.::..:|:.|.::|.:..:..:   |..
  Fly   420 LPDNATPIGTDNSRAQRELIAQLESKNKEIMREIARLRRQQETEQMAPENPALINELRALRQRKG 484

  Fly  3107 ETETSPKPVQKEPTPDPAQNTEFPESIKKDPTPEPDYKETATEAAQITPKEASPAPTNKNEQSAE 3171
            |.|.....:|    ....|..|..|.:.:                           ..||:|:|.
  Fly   485 ELEGHLGALQ----DSRRQLMEQLEGLMR---------------------------MLKNQQTAS 518

  Fly  3172 PTSKPEPMPRTAKKEEISEIEPPF--------TAPLAPFVDQLAETKITEIKTEFKEPVTSSQTI 3228
            |.|.|...||:.|       .||.        |:|::....|                       
  Fly   519 PRSTPNSSPRSGK-------SPPMPGGAGILGTSPMSALHAQ----------------------- 553

  Fly  3229 TTITTTVKTVDEHPIVEEVDEVSKSEKIVDVEEPTVHQQEPIKVNETSDDSTRTEPTNEIVHEER 3293
                    .:.:||:...|.  :..::::..::...|...|.       ..::.|..|:|..:.|
  Fly   554 --------QMQQHPMAGGVR--ASQQQLLQQQQQQAHGHGPF-------SQSQLEQLNQISSDMR 601

  Fly  3294 VVTVEEPTITETTVTTTTITTTTTS-SSEETLPQENTATVKETPLNE------------------ 3339
            .......:.|...:.|||.|...:: .|...:..:|.....:..|||                  
  Fly   602 SAFAANGSATPPPMRTTTATANVSAIPSLNPISNQNPNLNPDAELNEAADHLTSAISHMVSDLNA 666

  Fly  3340 ---------PVPSS---------PAETKEIEQTTNDDQKKPE----EIVDTEK--KTTEQKPVE- 3379
                     |.|:|         |.|.:.||...::|..:.|    |..:.|:  :|.|....| 
  Fly   667 GRGRAQQLGPQPASSIPQARFIMPLEFRHIEGGESEDSSQCECNDCECGEYEEVFRTDEDLECEG 731

  Fly  3380 ----------TIPTEPISTSETTTVTLTTKTTIVDEGKLHPPSDIEQIIQPHSTSDKHQSLVDFI 3434
                      ..||..:...:....|.         |:....|.:.:|:...:    |..|  ||
  Fly   732 AAAPFGNAYSLFPTSGVHEEDHFDYTF---------GQGEELSQVNRILGYRN----HPEL--FI 781

  Fly  3435 EQEKGTQPA--EGGSNI--LQNVKDA 3456
            :.|:...||  |.|..|  ||.:..|
  Fly   782 DDEQAGFPALHEIGETIDELQLIMHA 807

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
shotNP_725339.1 SAC6 204..>420 CDD:227401
CH_PLEC-like_rpt2 223..327 CDD:409038
SPEC 471..689 CDD:238103
SPEC 690..866 CDD:238103
SH3_10 864..929 CDD:407754
SPEC 1047..1250 CDD:238103
SPEC 1153..1390 CDD:238103
PLEC <1498..1526 CDD:197605
Plectin 1949..1980 CDD:459901
DUF5585 2860..>3198 CDD:465521 42/228 (18%)
SMC_prok_B <4936..>5564 CDD:274008
SPEC 5304..5513 CDD:238103
SPEC <5658..5787 CDD:413338
SPEC 5793..6007 CDD:238103
SPEC 6011..6220 CDD:238103
SPEC 6118..6330 CDD:238103
PRK09039 <6279..6441 CDD:181619
SPEC 6443..6660 CDD:238103
SPEC 6663..6878 CDD:238103
SPEC 6880..7087 CDD:238103
SPEC 6986..7196 CDD:238103
SPEC 7196..7417 CDD:238103
SPEC 7314..7526 CDD:238103
SPEC 7528..7747 CDD:238103
SPEC 7749..7968 CDD:238103
SPEC 7973..8181 CDD:238103
FRQ1 <8375..8444 CDD:444056
GAS2 8450..8522 CDD:128539
PHA03307 8550..>8795 CDD:223039
DybNP_001097287.1 EFh_DTN 45..205 CDD:320002
EF-hand-like motif 45..86 CDD:320002
EF-hand-like motif 95..129 CDD:320002
EF-hand-like motif 135..171 CDD:320002
EF-hand-like motif 182..205 CDD:320002
ZZ_dystrophin 232..280 CDD:239074
CwlO1 376..691 CDD:443091 63/398 (16%)
ClpA <430..>514 CDD:440308 15/114 (13%)
Blue background indicates that the domain is not in the aligned region.

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