DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment shot and beta-Spec

DIOPT Version :9

Sequence 1:NP_725339.1 Gene:shot / 36542 FlyBaseID:FBgn0013733 Length:8805 Species:Drosophila melanogaster
Sequence 2:NP_001259660.1 Gene:beta-Spec / 32746 FlyBaseID:FBgn0250788 Length:2308 Species:Drosophila melanogaster


Alignment Length:2314 Identity:504/2314 - (21%)
Similarity:847/2314 - (36%) Gaps:607/2314 - (26%)


- Green bases have known domain annotations that are detailed below.


  Fly   117 SSTHYQQVTRNKRISTEVLGSSVESTKTSQRAPNGH--------------RRVTTHIVRKVTTLS 167
            ||:...:.:|.|.::.|  ..||:. ||..:..|.|              .|...|:::.:..||
  Fly    31 SSSRLFERSRIKALAEE--RESVQK-KTFTKWVNSHLCRVNCRIADLYVDMRDGKHLIKLLEVLS 92

  Fly   168 RAEENAQPAEDLLPPAK---MIRSSE-----LEYRRALPPAIESSSTQ----------------- 207
                    .|.|..|.|   .|...|     |::.|.....:|:..:.                 
  Fly    93 --------GERLPKPTKGKMRIHCLENVDKALQFLREQRVHLENIGSHDIVDGNASLNLGLIWTI 149

  Fly   208 --RREISDIVVGKEDN---VSAREALLRWARRSTARYPGVRVNDFTSSWRDGLAFSALVHRNRPD 267
              |.:|.||.:.:.||   .||::|||.|.:..||.|..|.|.:||:||||||||:|::|::|||
  Fly   150 ILRFQIQDITIEEVDNKETKSAKDALLLWCQMKTAGYHNVNVRNFTTSWRDGLAFNAIIHKHRPD 214

  Fly   268 LLDWRKARNDRPRERLETAFHIVEKEYGVTRLLDPEDVDTNEPDEKSLITYISSLYDVFP----- 327
            |:.:.|.........|..||.:.|.:.|:.:|||.|||....|||||:|||:.:.|..|.     
  Fly   215 LVQFEKLSKTNAIHNLNNAFDVAEDKLGLAKLLDAEDVFVEHPDEKSIITYVVTYYHYFSKLKQE 279

  Fly   328 --EPPSIHPL--FDMESQRRVHEYRDLAQQFIYWCREKTAYLQERSFPPTLIEMKRLLSDLQRFR 388
              :...|..:  ..||:.:.||:|.:.....:.|.......|.||.|..:|..::..|:....:|
  Fly   280 TVQGKRIGKVVGIAMENDKMVHDYENFTSDLLKWIETTIQSLGEREFENSLAGVQGQLAQFSNYR 344

  Fly   389 SDEVSARKREKSKLIQIYKELERYFETVGE---VDVEAELRPDAIEKAWYRMNTALQDREVILQQ 450
            :.|...:..||..|..:...|:.......:   ...|.::..| |.|||.|:..|..:||:.|::
  Fly   345 TIEKPPKFVEKGNLEVLLFTLQSKMRANNQKPYTPKEGKMISD-INKAWERLEKAEHERELALRE 408

  Fly   451 EIERLERLQRLADKVQREIKHVDQKLTDLEGRIGEEGRRIERLHPVDAKSIVEALETEIRHLEEP 515
            |:.|.|:|::||.:..|:....:..|::.:..:.::....:......|....||:||:|...||.
  Fly   409 ELIRQEKLEQLAARFDRKASMRETWLSENQRLVSQDNFGFDLAAVEAAAKKHEAIETDIFAYEER 473

  Fly   516 IQDMNQDCHVLNEGRYPHVSELHKKVNKLHQRWAQLRTNFHTNLVQKLSGLKYPVHETTVTRQTR 580
            :|.:...|..|...||..|..:..:.:.:.:.|        |.|::.|             |..|
  Fly   474 VQAVVAVCDELESERYHDVKRILLRKDNVMRLW--------TYLLELL-------------RARR 517

  Fly   581 MVVE-SRQIDTNPHFRDLQEHIEWCQN--KLKQLLAA-DYGSDLPSVKEELDRQQH--------- 632
            |.:| |.|:..|     .||.:....|  ::||||.. |||..|..|::.|  |:|         
  Fly   518 MRLEISLQLQQN-----FQEMLYILDNMEEIKQLLMTDDYGKHLMGVEDLL--QKHSLVEADINI 575

  Fly   633 ---EHKIIDQFHTKILNDERQQTKFSGDELALYQQRLNQLQKVYAELLSTSTKRLSDLD---SLQ 691
               ..|::.|...|.|:|:.:..|....|:.:  .|:.||:..||||:..:.:|.|.|:   .|.
  Fly   576 LGERVKVVVQNSQKFLSDDPESYKPCDPEIIV--SRVQQLEDAYAELVRLAVERRSRLEESRKLW 638

  Fly   692 HFLGQASAELQWLNEKEQV----EITRDWADKQLDLPSVHRYYENLMSELEKREMHFATILDRGE 752
            .|....:.|..|:.||||:    |:..|.....|.| |.|:..|   ||:...:.....:...|.
  Fly   639 QFYWDTADEENWIKEKEQIVSTDEVGHDLTTVNLML-SKHKALE---SEITSHDPQLQNVAKVGS 699

  Fly   753 ALLNQQHPASKCIEAHLTALQQQWAWLLQLTLCLEVHLKHATEYHQFFGEIKDAEQWLAKRDEIL 817
            .|:.:.|..:..|:..|..:..:|..||.||......|::|.||.|.|.:..|.:.|:.....|:
  Fly   700 ELITEGHFGADRIKDRLKEILNKWDHLLDLTKYRRQRLENAVEYFQLFADADDVDNWMLDTLRIV 764

  Fly   818 NSKFSQSDFGLDQG--ETLLRGMQDLREELNAFGETVATLQRRAQTV-------VPLNKRRQPVN 873
            :|:    |.|.|:.  ::||:..:|:.:||..:.|.:..|.::|:::       ..::||.:.::
  Fly   765 SSE----DVGRDEANVQSLLKKHKDVADELKNYAEVIDALHKQAESLKLNEAEKANVDKRLEAID 825

  Fly   874 RQGPVQAICAYKQQGQL-QIEKGETVTLL-------DNSGRVKWRVRTAKGQEGPIPGACLLLPP 930
            .:        ||:..:| ::.|...:..|       :..|..:|.....|..:...||       
  Fly   826 NR--------YKELTELAKLRKQRLLDALSLYKLMSEADGVEQWIKEKTKMLDTMTPG------- 875

  Fly   931 PDQEAIDAAERLKRLFDRSV---------------------------ALWQKKHLRLRQNMIFAT 968
            .|.|.::..:.....||:.:                           .|.::.||    |..::|
  Fly   876 KDIEDVEIMKHRFEGFDKEMNANASRVAVVNQLARQLLHVEHPNSDEILERQNHL----NQEWST 936

  Fly   969 IRVVKGWDFDQFLAMGPEQRTAI--RRALN--DDADKLLSEGDPNDPQL-------RRLR---RE 1019
            :|.......|...:....|...|  |..::  :|..::|:|.|..:..|       |||.   |:
  Fly   937 LREKAEAKMDDLKSAHGVQTFYIECRETISWIEDKKRILTETDSLEMDLTGVMTLQRRLSGMDRD 1001

  Fly  1020 MDEVNRLFDEFEKRARA-EEESKQASRIFTEECLAIK--------------SKLED------MAR 1063
            :..:.......|:.|.: |:|..:.::|..|....|:              ||||:      ..|
  Fly  1002 LAAIQAKLSSLEREANSIEDEHPEEAKIIRERIAQIELIWEQLTQMLKERDSKLEEAGDLHRFLR 1066

  Fly  1064 ELD-----------QIILAPLPRDLDSLEHVLEIHSDYERRLHLLEPELKHLQETFRTIALKTPV 1117
            :||           .:.....|..|...|.:|..|......:.....:.|::.|....:..:...
  Fly  1067 DLDHFQTWLTKTQTDVASEDTPTSLPEAEKLLNQHQSIREEIDNYTEDYKNMMEYGERLTSEGST 1131

  Fly  1118 --------LKKSLDNLMELWKELNTQSGLHKDRLKLLEASL-------------AGLEDNEHVIS 1161
                    |::.|:.|.:.|:||:.   :.::|..||..||             ..|...||.:|
  Fly  1132 SDDPQYMFLRERLNALKDGWEELHQ---MWENRQVLLSQSLDQQLFNRDARQTEVLLSQQEHFLS 1193

  Fly  1162 ---------ELENELARHQDLPSTAEGLQQVFKQLNHMQDIITQQQP-QMDKMNDAADQL-GR-- 1213
                     :.||:|.||:...:|.|........|..:.|.:.::.. ..||:...|:.: ||  
  Fly  1194 KDDTPVNLEQAENQLKRHEAFLTTMEANDDKINTLLQVADTLVEKDHFDADKIGKRAENITGRRD 1258

  Fly  1214 ------MGVPTKVLGDLKRLHSNVERLN--TRW--SAVCNQLGERMRSCETAIGLMKNLQSSVQV 1268
                  :....|:...:| ||..::.|.  ..|  ........|..||.:|    :.:..:..|.
  Fly  1259 DNRQRALDQHEKLKNQVK-LHEFLQDLEELAEWVQEKYATSQDESYRSAKT----IHSKWTRHQA 1318

  Fly  1269 EESWVDGTTERLSAMPTATSAYELDKLLGAAIERKPKIENVNVAGGRLIREAKIYDSKCLRFVDW 1333
            .|:.:....|||  .....||.||.|       .||:.:  :|...:|...||.:|         
  Fly  1319 FEAEIAANKERL--FEAEKSAQELSK-------EKPEFK--DVIEPKLKELAKQFD--------- 1363

  Fly  1334 LVEARPSFSPPRRDLRPADSDPGATQYYSQR----------LDNL-----------NTKND---- 1373
                         ||.....:.||..:.:.|          :|:.           :|.||    
  Fly  1364 -------------DLEVHTKEKGAMLFDANREVLVQQTCDDIDSYITDLEKQIVSGDTANDLTSV 1415

  Fly  1374 RLLEQLSQRLKTAIEVNGSDGLQYAESLQKPLKTFRVDFSAGSVPTGDGYAARQEDLYTTTYSTT 1438
            .:|.|..|.::|.:.|..    :..|.:.|     :.::...:||        :|.:.......|
  Fly  1416 NILMQKQQVIQTQMAVKA----RQVEEIDK-----QTEYLQKTVP--------EEKIEPIVVKKT 1463

  Fly  1439 QI-------------SSTKTTKSSTKSVYSSDGLDA---ASQEVSTAGLPQSQIQFNEIRTLKRS 1487
            .:             ......|......:..|..|.   ..:::..|..|........:..||:.
  Fly  1464 AVLERFEKIKAPLLERQKALEKKKEAFQFCRDVEDEKLWIDEKLPVANSPDYGNSLFNVHVLKKK 1528

  Fly  1488 QQLGGHSVLDIAGIRDPRTGRVLTIG-EAIQLRILDVRTGEMLVGDRRITLEQAADQGLIDLQLA 1551
            .|    |:.......:||...:...| :.|.....|.:..|.|:.|.....::..|  .|: ...
  Fly  1529 NQ----SLATEIDNHEPRINAICNNGRKLIDEGHEDAKKFEALISDLTQKWQELKD--AIE-NRR 1586

  Fly  1552 KQLLEPGAGRDASGRELSLLEVIQR---EISEAESGYETAEKRIKVNNTVTVEQTSGELGSPENP 1613
            |.|||.              |.:|:   :..||||.....|..:.|.:....|.::..|  .:..
  Fly  1587 KHLLES--------------EKVQQYFFDAQEAESWMSEQELYMMVEDRGKDEISAQNL--MKKH 1635

  Fly  1614 RNIADAIT--AGSVDTKTGLYRVKSGQTISLAEAYERGYLIRHESVTIKSNALCLSDAIAHGLVD 1676
            .|:..::.  |.::.....:.|..||..||..:|           |.:|.:.|   |.:..||.|
  Fly  1636 ENLEQSVEDYANTIRQLGEVARQFSGDDISSGDA-----------VAVKQSQL---DKLYAGLKD 1686

  Fly  1677 GAG------------------------WIADRN--SG--------DKFRLDSAIANQLIDASVRE 1707
            .||                        ||.||.  :|        |...|.|...|:.  |...|
  Fly  1687 LAGERRARLNEALQLFMLSREVDDLEQWITDREVVAGSQELGQDFDHVTLLSERFNEF--ARDTE 1749

  Fly  1708 VVDAKRDTKIT--LQEALQSGVLNAKT----GRYVNEVTKEKLTFAEARNRQLIVKP------YT 1760
            .|..:|..|:.  ....:|:|..::.|    ...:||..::.|...|.|.:.|....      :.
  Fly  1750 AVGGERVAKVNGIADNLIQAGHSDSATIAEWKDNLNESWQDLLELIETRTQMLAASRELHKFFHD 1814

  Fly  1761 LKDICDLNLLDKQAQITSPMRREKLSI-----------------------MQAIEAGVLD---GN 1799
            .||:.. .:|:||..::..:.|:..|:                       :|...|.:.|   |:
  Fly  1815 CKDVLG-RILEKQHGVSDELGRDAGSVSTLQRKHYNFLQDLITLYSQVQQIQEESAKLQDAYAGD 1878

  Fly  1800 LLKCITKRKGELVTLQEAIADGIVLPAEC-----KYRDFMTGELISI----------PEAVERGL 1849
            ..|.||.|:      ||.:.....|.|.|     |..|  ||:|...          .|.:.|.:
  Fly  1879 KAKEITNRE------QEVLHAWDNLQAMCDARKQKLAD--TGDLFRFFNMVRILMIWMEDLVRQM 1935

  Fly  1850 ISSVAQRSIFDIDGFKDLRSN------------DYVSFNVALSRDLLRRKSTGFALETGRDSLVP 1902
            .:|...|   |:.|.:.|.:|            |.....::|.::||.|..  :|....:|.|:.
  Fly  1936 NTSEKPR---DVSGVELLMNNHQSLKAEIDTREDNFGACISLGKELLTRNH--YASADIKDRLMT 1995

  Fly  1903 LEVAVSEGLVRQ------------EVYEMFSRGIGVQNASGKELSVFDLVYHNLIDPKTGYLLDP 1955
            |..: ...|:|:            |||: |:|                                 
  Fly  1996 LSNS-RNALLRRWEERWENLQLILEVYQ-FAR--------------------------------- 2025

  Fly  1956 KTGETVPLDTAIERKFITPEGALLLSSLLNITLTTETVTRTINRYVTIR--AGSQEPVDSVL--L 2016
                    |.|:...::..:...||||.|..|:  :.|...|.::....  |.:||...|.|  |
  Fly  2026 --------DAAVAEAWLIAQEPYLLSSELGHTI--DEVENLIKKHEAFEKSAAAQEERFSALERL 2080

  Fly  2017 TFTEAV----RQGFIDE-ERQLFKDPKTGNIYS--VQQA 2048
            |..|..    ||...:| |||..|:.:.....|  .:||
  Fly  2081 TTFELKEMKRRQELAEEAERQRIKEEQEAKAASEAAEQA 2119

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
shotNP_725339.1 SAC6 204..>420 CDD:227401 74/249 (30%)
CH 223..327 CDD:306753 48/103 (47%)
SPEC 471..689 CDD:238103 58/236 (25%)
SPEC 690..866 CDD:238103 48/188 (26%)
SH3 885..922 CDD:327375 7/44 (16%)
SPEC 1047..1250 CDD:238103 52/277 (19%)
SPEC 1153..1390 CDD:238103 58/284 (20%)
PLEC <1498..1526 CDD:197605 5/28 (18%)
Plectin 1949..1981 CDD:307019 3/31 (10%)
DNA_pol3_delta2 <2711..3178 CDD:331068
DUF4775 3026..3357 CDD:330579
SMC_N <4904..5566 CDD:330553
SPEC 5304..5513 CDD:238103
SPEC <5658..5787 CDD:321951
SPEC 5793..6007 CDD:238103
SPEC 6011..6220 CDD:238103
SPEC 6118..6330 CDD:238103
PRK09039 <6279..6441 CDD:332967
SPEC 6443..6660 CDD:238103
SPEC 6663..6878 CDD:238103
SPEC 6880..7087 CDD:238103
SPEC 6986..7196 CDD:238103
SPEC 7196..7417 CDD:238103
SPEC 7314..7526 CDD:238103
SPEC 7528..7747 CDD:238103
SPEC 7749..7968 CDD:238103
SPEC 7973..8181 CDD:238103
EF-hand_7 8373..8437 CDD:316058
GAS2 8450..8522 CDD:128539
Herpes_ICP4_C 8550..>8795 CDD:332854
beta-SpecNP_001259660.1 CH 51..149 CDD:278723 18/106 (17%)
CH 170..269 CDD:278723 47/98 (48%)
Spectrin 298..408 CDD:278843 27/110 (25%)
SPEC 422..521 CDD:197544 23/119 (19%)
SPEC 525..740 CDD:238103 62/227 (27%)
SPEC 639..846 CDD:238103 53/222 (24%)
SPEC 848..1058 CDD:238103 39/220 (18%)
SPEC 955..1169 CDD:238103 42/216 (19%)
SPEC 1170..1380 CDD:238103 49/247 (20%)
SPEC 1386..1484 CDD:197544 15/114 (13%)
SPEC 1488..1699 CDD:238103 49/247 (20%)
SPEC 1594..1806 CDD:238103 49/229 (21%)
SPEC 1807..2015 CDD:238103 44/222 (20%)
Spectrin 2018..>2078 CDD:278843 19/103 (18%)
PH 2167..2275 CDD:278594
PH_beta_spectrin 2167..2274 CDD:269975
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C45439903
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
21.840

Return to query results.
Submit another query.