DRSC/TRiP Functional Genomics Resources

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Protein Alignment shot and M116.5

DIOPT Version :9

Sequence 1:NP_725339.1 Gene:shot / 36542 FlyBaseID:FBgn0013733 Length:8805 Species:Drosophila melanogaster
Sequence 2:NP_501432.4 Gene:M116.5 / 177642 WormBaseID:WBGene00019792 Length:1020 Species:Caenorhabditis elegans


Alignment Length:1198 Identity:260/1198 - (21%)
Similarity:450/1198 - (37%) Gaps:312/1198 - (26%)


- Green bases have known domain annotations that are detailed below.


  Fly  7629 QHELEEALREAHGYIAEVQDIL-------GWLGDVDAVIGASKPVGGLPETATEQLERFMEVYNE 7686
            ||:::.:       .|:.:|||       |...||...:........:.:..|:.....::::.:
 Worm     9 QHKIDPS-------DAQEKDILDHYELNRGKFNDVRDTMQKKTFTKWVNKHLTKTDHTIVDLFVD 66

  Fly  7687 LDENRPKVETIQAQGQEYIKRQNQM----KVSSSNLQHTLRTLKQRWDAVVSRASDKKIKL-EIA 7746
            |.:....:..::|...|.|:|:|..    ::  .|:|:.|..||.           |.||| .|.
 Worm    67 LRDGFALIALLEALTGERIQRENGYTRFHRI--QNVQYCLDFLKM-----------KNIKLVNIR 118

  Fly  7747 LKEATEFHDTLQAFVEWLTQAEKLLSNAEPVSR---VLETIQAQM--EEHKVLQKDVSTH----- 7801
            .::..|.:..|...:.|..    :|:....|.|   :||:.|.:.  |:|....:| |.|     
 Worm   119 PEDIVEGNGKLTLGLIWTI----ILNFQVSVIRQRLLLESSQHEQTNEKHTTNSQD-SIHRSETT 178

  Fly  7802 --REAMLLLDK-------KGTHLKYFSQKQDVILIKNLLVSVQHR-------WERVVSKAAERTR 7850
              |:|:|...|       :|..:.:.:..:|.:....::    ||       |.::.|.:...|.
 Worm   179 SARDALLQWAKRTTAEYPRGNVINFSNSWRDGLAFNAII----HRYRSSAIDWNKINSDSVSNTE 239

  Fly  7851 ALDHGYKEA-REFNDAWSGMMQYLQETEQVLDQIIEEA-TASKEPQKIKKYIGKLKETHRQLGAK 7913
            .|:..:..| |||.            .|::||  .|:. |.:.:.:.|..|:..|   :..|..:
 Worm   240 RLNIAFAAADREFG------------VERLLD--AEDVDTNNPDEKSIITYVSSL---YNALPQE 287

  Fly  7914 QSVYDGTMRTGKNLLERAPK----GDRPVLDKMLIELKEQWTRVWSKSIDRQRKLEEA---LLLS 7971
            ..:.......||.|.|...|    .|. :.:.:.:             |.:...|:|:   ||:|
 Worm   288 PEMSKFAASGGKRLEEEIGKLQADADH-IFEALAV-------------ISKDEALQESPSLLLVS 338

  Fly  7972 GQFSDALGELLDWLK-----------KAKSRLNENGPVHGDLETVQGLCEHHKHIEQDLQKRAAQ 8025
            .|.|..:.:|...||           |.|..:...|| ..|.:.:..|.:|.:....|:.:..:.
 Worm   339 KQVSKKIEQLKVLLKLVEEKKDTFISKCKLVMRTAGP-ESDAKELDSLMKHVEDAYSDVFELISD 402

  Fly  8026 MQGVLKTGRDLERSGNNPEVGRQLDEMQSIWEEVKSAVAKRGERLQVA------------LVDAE 8078
            .:|::    |...:.|                 :.|......|.|.:|            |:|||
 Worm   403 KEGLI----DRCNASN-----------------INSDSVPNTESLNLAFAAADPEFGAGRLLDAE 446

  Fly  8079 KLNARVQALFDWLDHAEHK--LRYA---KNAPDDEKVSREMMDIHMDFMKDLRVREREKTETFE- 8137
            .:        |..::.:.|  :.|.   ||||.|.::||........|.:::...:.:....|| 
 Worm   447 DV--------DTNNNPDEKPVITYVSSLKNAPQDPEMSRLAASGGKGFEEEIGKLQADADHIFEA 503

  Fly  8138 ---YAEDIINKAYPDAIPIIKNWLSIIQQRWEEVRQWAINRESKLEQHLQSLKDLDDTIEELLAW 8199
               .::|...:..|..:...|              |...|:..||::.|:.:::..||      :
 Worm   504 LAVMSKDEALQESPSLLLYSK--------------QIRFNKIQKLKELLKPVEEKKDT------F 548

  Fly  8200 LSGLEGTLLNLKHEQLPDEIPPVEKLIED-HKEFMENTARRQNEVDRACKPRQLPPGARKPSRSG 8263
            :|..:..:.....|....|:..:.|.:|| :.:..|..:.::..:|| |....:  .:...|.:.
 Worm   549 ISECKLVMKTAGPEADTKELDSLLKQVEDAYSDVFELISDKEGLIDR-CNASNI--NSDSVSNTE 610

  Fly  8264 KTPVFKGSRDQGLNARK--GSRITPTRDTPDRDRLPHY----------GPRFSP--STSGPELEF 8314
            :..:...:.|....|.:  .:....|.:.||...:..|          .|..|.  ::.|..|| 
 Worm   611 RLNIALAAADAEFGAGRLLDAEDVDTNNNPDEKSIITYVSSLNNAFPLEPEMSKYVASGGKRLE- 674

  Fly  8315 RSPRAKLLWTKWRDVWMLSWERQRLLNDHLL-YLKDVERARNFSWDDWRKRFLKYMNHKKSRLTD 8378
                        .::..|..:.     ||:. .|:::.:..............|.::.|..:|..
 Worm   675 ------------EEIGKLQADA-----DHIFKALEEISKDEALQESPSLLLDSKQVSKKIEQLKV 722

  Fly  8379 LFRKMDKDNNGMIPRDVFIDGILNTKFDTSGLE--MKAVADLFD------RNGEGLIDWQEFIAA 8435
            |.:.:::..:..|.....:...:..:.|...|:  ||.|.|.:.      .:.|||||       
 Worm   723 LLKPVEEKKDTFISESKLVMKTVGPESDAKELDSLMKHVEDAYSDVVELISDKEGLID------- 780

  Fly  8436 LRPDWQER--KPANDSDKIHDEVKRLVMLCTCRQKFRVFQVGEGKYRFGDSQKLRLVRILRSTVM 8498
             |.:...|  .|..:::||.:|::.|...|:|...:::.::.|..|||||:...|:|||||||||
 Worm   781 -RCNASNRIAHPQTETEKITNEIELLKETCSCCTPYQIEKISENYYRFGDTHIKRMVRILRSTVM 844

  Fly  8499 VRVGGGWVALDEFLQKNDPCRAKGRTNI----ELREQFILADGVSQSMAAFTPRRSTPNAAATAS 8559
            |||||||..|:|.|||:||||.|||.||    |.|....|     ..|.:||..|          
 Worm   845 VRVGGGWEPLEESLQKHDPCRTKGRLNINMFPEARPIHAL-----DLMQSFTKNR---------- 894

  Fly  8560 SSPHAHNGGSSNLPPYMSGQGPIIKVRERSVRSIPMSRPSRSSLSASTPDSLSDNEGSHGGPSGR 8624
               ||..      .|.....|||:|:||::.||:|||                   |..||.:| 
 Worm   895 ---HAKQ------MPIAGTPGPIMKIREKTERSVPMS-------------------GGLGGTAG- 930

  Fly  8625 YT-----PRKVTYTSTRTGLTPGG------SRAGSKPNSRPLSRQGSKPPSRHGSTLSLDSTDDH 8678
            ||     |||......|...||..      ||.|...|.:....:.|. ||:..|..|.:..|..
 Worm   931 YTVTTESPRKTPQRPFRIPRTPSDKTPGRQSRVGCVSNLKNSIVEPSS-PSQSESRASPEVADRQ 994

  Fly  8679 TPSRIPQRK------PSTGSTASGTTPR 8700
            ....:..::      |..|.::|  ||:
 Worm   995 KRISLSLKEKGKRYSPQVGPSSS--TPK 1020

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
shotNP_725339.1 SAC6 204..>420 CDD:227401
CH 223..327 CDD:306753
SPEC 471..689 CDD:238103
SPEC 690..866 CDD:238103
SH3 885..922 CDD:327375
SPEC 1047..1250 CDD:238103
SPEC 1153..1390 CDD:238103
PLEC <1498..1526 CDD:197605
Plectin 1949..1981 CDD:307019
DNA_pol3_delta2 <2711..3178 CDD:331068
DUF4775 3026..3357 CDD:330579
SMC_N <4904..5566 CDD:330553
SPEC 5304..5513 CDD:238103
SPEC <5658..5787 CDD:321951
SPEC 5793..6007 CDD:238103
SPEC 6011..6220 CDD:238103
SPEC 6118..6330 CDD:238103
PRK09039 <6279..6441 CDD:332967
SPEC 6443..6660 CDD:238103
SPEC 6663..6878 CDD:238103
SPEC 6880..7087 CDD:238103
SPEC 6986..7196 CDD:238103
SPEC 7196..7417 CDD:238103
SPEC 7314..7526 CDD:238103
SPEC 7528..7747 CDD:238103 26/129 (20%)
SPEC 7749..7968 CDD:238103 48/253 (19%)
SPEC 7973..8181 CDD:238103 44/239 (18%)
EF-hand_7 8373..8437 CDD:316058 14/71 (20%)
GAS2 8450..8522 CDD:128539 38/71 (54%)
Herpes_ICP4_C 8550..>8795 CDD:332854 41/168 (24%)
M116.5NP_501432.4 CH 41..142 CDD:237981 21/117 (18%)
CH 179..285 CDD:237981 24/126 (19%)
CH <610..652 CDD:294029 6/41 (15%)
GAS2 796..868 CDD:128539 38/71 (54%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 1 1.000 133 1.000 Domainoid score I3136
eggNOG 1 0.900 - - E2759_KOG0516
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
32.900

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