DRSC/TRiP Functional Genomics Resources

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Protein Alignment shot and D2096.11

DIOPT Version :9

Sequence 1:NP_725339.1 Gene:shot / 36542 FlyBaseID:FBgn0013733 Length:8805 Species:Drosophila melanogaster
Sequence 2:NP_001379846.1 Gene:D2096.11 / 177638 WormBaseID:WBGene00017078 Length:727 Species:Caenorhabditis elegans


Alignment Length:801 Identity:184/801 - (22%)
Similarity:302/801 - (37%) Gaps:209/801 - (26%)


- Green bases have known domain annotations that are detailed below.


  Fly  7958 IDRQRKLEEA---LLLSGQFSDALGELLDWLK-----------KAKSRLNENGPVHGDLETVQGL 8008
            |.:...|:|:   ||:|.|.|..:.:|...||           |.|..:...|| ..|.:.:..|
 Worm    33 ISKDEALQESPSLLLVSKQVSKKIEQLKVLLKLVEEKKDTFISKCKLVMRTAGP-ESDAKELDSL 96

  Fly  8009 CEHHKHIEQDLQKRAAQMQGVLKTGRDLERSGNNPEVGRQLDEMQSIWEEVKSAVAKRGERLQVA 8073
            .:|.:....|:.:..:..:|::    |...:.|                 :.|......|.|.:|
 Worm    97 MKHVEDAYSDVFELISDKEGLI----DRFNASN-----------------INSDSVPNTESLNLA 140

  Fly  8074 ------------LVDAEKLNARVQALFDWLDHAEHK--LRYA---KNAPDDEKVSREMMDIHMDF 8121
                        |:|||.:        |..::.:.|  :.|.   .|||.|.::||........|
 Worm   141 FAAADPEFGAGRLLDAEDV--------DTNNNPDEKPVITYVSSLNNAPQDPEMSRLAASGGKGF 197

  Fly  8122 MKDLRVREREKTETFE----YAEDIINKAYPDAIPIIKNWLSIIQQRWEEVRQWAINRESKLEQH 8182
            .:::...:.:....||    .::|...:..|..:...|              |...|:..||::.
 Worm   198 EEEIGKLQADADHIFEALAVMSKDEALQESPSLLLYSK--------------QIRFNKIQKLKEL 248

  Fly  8183 LQSLKDLDDTIEELLAWLSGLEGTLLNLKHEQLPDEIPPVEKLIED-HKEFMENTARRQNEVDRA 8246
            |:.:::..||      ::|..:..:.....|....|:..:.|.:|| :.:..|..:.::..:|| 
 Worm   249 LKPVEEKKDT------FISECKLVMKTAGPEADTKELDSLLKQVEDAYSDVFELISDKEGLIDR- 306

  Fly  8247 CKPRQLPPGARKPSRSGKTPVFKGSRDQGLNARK--GSRITPTRDTPDRDRLPHY---------- 8299
            |....:  .:...|.:.:..:...:.|....|.:  .:....|.:.||...:..|          
 Worm   307 CNASNI--NSDSVSNTERLNIALAAADAEFGAGRLLDAEDVDTNNNPDEKSIITYVSSLNNAFPL 369

  Fly  8300 GPRFSP--STSGPELEFRSPRAKLLWTKWRDVWMLSWERQRLLNDHLL-YLKDVERARNFSWDDW 8361
            .|..|.  ::.|..||             .::..|..:.     ||:. .|:::.:.........
 Worm   370 EPEMSKYVASGGKRLE-------------EEIGKLQADA-----DHIFKALEEISKDEALQESPS 416

  Fly  8362 RKRFLKYMNHKKSRLTDLFRKMDKDNNGMIPRDVFIDGILNTKFDTSGLE--MKAVADLFD---- 8420
            .....|.::.|..:|..|.:.:::..:..|.....:...:..:.|...|:  ||.|.|.:.    
 Worm   417 LLLDSKQVSKKIEQLKVLLKPVEEKKDTFISESKLVMKTVGPESDAKELDSLMKHVEDAYSDVVE 481

  Fly  8421 --RNGEGLIDWQEFIAALRPDWQER--KPANDSDKIHDEVKRLVMLCTCRQKFRVFQVGEGKYRF 8481
              .:.|||||        |.:...|  .|..:::||.:|::.|...|:|...:::.::.|..|||
 Worm   482 LISDKEGLID--------RCNASNRIAHPQTETEKITNEIELLKETCSCCTPYQIEKISENYYRF 538

  Fly  8482 GDSQKLRLVRILRSTVMVRVGGGWVALDEFLQKNDPCRAKGRTNI----ELREQFILADGVSQSM 8542
            ||:...|:||||||||||||||||..|:|.|||:||||.|||.||    |.|....|     ..|
 Worm   539 GDTHIKRMVRILRSTVMVRVGGGWEPLEESLQKHDPCRTKGRLNINMFPEARPIHAL-----DLM 598

  Fly  8543 AAFTPRRSTPNAAATASSSPHAHNGGSSNLPPYMSGQGPIIKVRERSVRSIPMSRPSRSSLSAST 8607
            .:||..|             ||..      .|.....|||:|:||::.||:|||           
 Worm   599 QSFTKNR-------------HAKQ------MPIAGTPGPIMKIREKTERSVPMS----------- 633

  Fly  8608 PDSLSDNEGSHGGPSGRYT-----PRKVTYTSTRTGLTPGGSRAGSKPNSRPLSRQGSKPPSRHG 8667
                    |..||.:| ||     |||......|...||.....|         ||     ||.|
 Worm   634 --------GGLGGTAG-YTVTTESPRKTPQRPFRIPRTPSDKTPG---------RQ-----SRVG 675

  Fly  8668 --STLSLDSTDDHTPSRIPQR 8686
              |.|.....:..:||:...|
 Worm   676 CVSNLKNSIVEPSSPSQSESR 696

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
shotNP_725339.1 SAC6 204..>420 CDD:227401
CH 223..327 CDD:306753
SPEC 471..689 CDD:238103
SPEC 690..866 CDD:238103
SH3 885..922 CDD:327375
SPEC 1047..1250 CDD:238103
SPEC 1153..1390 CDD:238103
PLEC <1498..1526 CDD:197605
Plectin 1949..1981 CDD:307019
DNA_pol3_delta2 <2711..3178 CDD:331068
DUF4775 3026..3357 CDD:330579
SMC_N <4904..5566 CDD:330553
SPEC 5304..5513 CDD:238103
SPEC <5658..5787 CDD:321951
SPEC 5793..6007 CDD:238103
SPEC 6011..6220 CDD:238103
SPEC 6118..6330 CDD:238103
PRK09039 <6279..6441 CDD:332967
SPEC 6443..6660 CDD:238103
SPEC 6663..6878 CDD:238103
SPEC 6880..7087 CDD:238103
SPEC 6986..7196 CDD:238103
SPEC 7196..7417 CDD:238103
SPEC 7314..7526 CDD:238103
SPEC 7528..7747 CDD:238103
SPEC 7749..7968 CDD:238103 3/12 (25%)
SPEC 7973..8181 CDD:238103 43/239 (18%)
EF-hand_7 8373..8437 CDD:316058 14/71 (20%)
GAS2 8450..8522 CDD:128539 38/71 (54%)
Herpes_ICP4_C 8550..>8795 CDD:332854 37/144 (26%)
D2096.11NP_001379846.1 CH_SF <117..180 CDD:412120 13/91 (14%)
CH_SF <315..368 CDD:412120 7/52 (13%)
GAS2 507..579 CDD:128539 38/71 (54%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 1 1.000 83 1.000 Domainoid score I5332
eggNOG 1 0.900 - - E2759_KOG0516
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
32.810

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