DRSC/TRiP Functional Genomics Resources

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Protein Alignment shot and D2096.11

DIOPT Version :10

Sequence 1:NP_725339.1 Gene:shot / 36542 FlyBaseID:FBgn0013733 Length:8805 Species:Drosophila melanogaster
Sequence 2:NP_001379846.1 Gene:D2096.11 / 177638 WormBaseID:WBGene00017078 Length:727 Species:Caenorhabditis elegans


Alignment Length:801 Identity:184/801 - (22%)
Similarity:302/801 - (37%) Gaps:209/801 - (26%)


- Green bases have known domain annotations that are detailed below.


  Fly  7958 IDRQRKLEEA---LLLSGQFSDALGELLDWLK-----------KAKSRLNENGPVHGDLETVQGL 8008
            |.:...|:|:   ||:|.|.|..:.:|...||           |.|..:...|| ..|.:.:..|
 Worm    33 ISKDEALQESPSLLLVSKQVSKKIEQLKVLLKLVEEKKDTFISKCKLVMRTAGP-ESDAKELDSL 96

  Fly  8009 CEHHKHIEQDLQKRAAQMQGVLKTGRDLERSGNNPEVGRQLDEMQSIWEEVKSAVAKRGERLQVA 8073
            .:|.:....|:.:..:..:|::    |...:.|                 :.|......|.|.:|
 Worm    97 MKHVEDAYSDVFELISDKEGLI----DRFNASN-----------------INSDSVPNTESLNLA 140

  Fly  8074 ------------LVDAEKLNARVQALFDWLDHAEHK--LRYA---KNAPDDEKVSREMMDIHMDF 8121
                        |:|||.:        |..::.:.|  :.|.   .|||.|.::||........|
 Worm   141 FAAADPEFGAGRLLDAEDV--------DTNNNPDEKPVITYVSSLNNAPQDPEMSRLAASGGKGF 197

  Fly  8122 MKDLRVREREKTETFE----YAEDIINKAYPDAIPIIKNWLSIIQQRWEEVRQWAINRESKLEQH 8182
            .:::...:.:....||    .::|...:..|..:...|              |...|:..||::.
 Worm   198 EEEIGKLQADADHIFEALAVMSKDEALQESPSLLLYSK--------------QIRFNKIQKLKEL 248

  Fly  8183 LQSLKDLDDTIEELLAWLSGLEGTLLNLKHEQLPDEIPPVEKLIED-HKEFMENTARRQNEVDRA 8246
            |:.:::..||      ::|..:..:.....|....|:..:.|.:|| :.:..|..:.::..:|| 
 Worm   249 LKPVEEKKDT------FISECKLVMKTAGPEADTKELDSLLKQVEDAYSDVFELISDKEGLIDR- 306

  Fly  8247 CKPRQLPPGARKPSRSGKTPVFKGSRDQGLNARK--GSRITPTRDTPDRDRLPHY---------- 8299
            |....:  .:...|.:.:..:...:.|....|.:  .:....|.:.||...:..|          
 Worm   307 CNASNI--NSDSVSNTERLNIALAAADAEFGAGRLLDAEDVDTNNNPDEKSIITYVSSLNNAFPL 369

  Fly  8300 GPRFSP--STSGPELEFRSPRAKLLWTKWRDVWMLSWERQRLLNDHLL-YLKDVERARNFSWDDW 8361
            .|..|.  ::.|..||             .::..|..:.     ||:. .|:::.:.........
 Worm   370 EPEMSKYVASGGKRLE-------------EEIGKLQADA-----DHIFKALEEISKDEALQESPS 416

  Fly  8362 RKRFLKYMNHKKSRLTDLFRKMDKDNNGMIPRDVFIDGILNTKFDTSGLE--MKAVADLFD---- 8420
            .....|.::.|..:|..|.:.:::..:..|.....:...:..:.|...|:  ||.|.|.:.    
 Worm   417 LLLDSKQVSKKIEQLKVLLKPVEEKKDTFISESKLVMKTVGPESDAKELDSLMKHVEDAYSDVVE 481

  Fly  8421 --RNGEGLIDWQEFIAALRPDWQER--KPANDSDKIHDEVKRLVMLCTCRQKFRVFQVGEGKYRF 8481
              .:.|||||        |.:...|  .|..:::||.:|::.|...|:|...:::.::.|..|||
 Worm   482 LISDKEGLID--------RCNASNRIAHPQTETEKITNEIELLKETCSCCTPYQIEKISENYYRF 538

  Fly  8482 GDSQKLRLVRILRSTVMVRVGGGWVALDEFLQKNDPCRAKGRTNI----ELREQFILADGVSQSM 8542
            ||:...|:||||||||||||||||..|:|.|||:||||.|||.||    |.|....|     ..|
 Worm   539 GDTHIKRMVRILRSTVMVRVGGGWEPLEESLQKHDPCRTKGRLNINMFPEARPIHAL-----DLM 598

  Fly  8543 AAFTPRRSTPNAAATASSSPHAHNGGSSNLPPYMSGQGPIIKVRERSVRSIPMSRPSRSSLSAST 8607
            .:||..|             ||..      .|.....|||:|:||::.||:|||           
 Worm   599 QSFTKNR-------------HAKQ------MPIAGTPGPIMKIREKTERSVPMS----------- 633

  Fly  8608 PDSLSDNEGSHGGPSGRYT-----PRKVTYTSTRTGLTPGGSRAGSKPNSRPLSRQGSKPPSRHG 8667
                    |..||.:| ||     |||......|...||.....|         ||     ||.|
 Worm   634 --------GGLGGTAG-YTVTTESPRKTPQRPFRIPRTPSDKTPG---------RQ-----SRVG 675

  Fly  8668 --STLSLDSTDDHTPSRIPQR 8686
              |.|.....:..:||:...|
 Worm   676 CVSNLKNSIVEPSSPSQSESR 696

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
shotNP_725339.1 SAC6 204..>420 CDD:227401
CH_PLEC-like_rpt2 223..327 CDD:409038
SPEC 471..689 CDD:238103
SPEC 690..866 CDD:238103
SH3_10 864..929 CDD:407754
SPEC 1047..1250 CDD:238103
SPEC 1153..1390 CDD:238103
PLEC <1498..1526 CDD:197605
Plectin 1949..1980 CDD:459901
DUF5585 2860..>3198 CDD:465521
SMC_prok_B <4936..>5564 CDD:274008
SPEC 5304..5513 CDD:238103
SPEC <5658..5787 CDD:413338
SPEC 5793..6007 CDD:238103
SPEC 6011..6220 CDD:238103
SPEC 6118..6330 CDD:238103
PRK09039 <6279..6441 CDD:181619
SPEC 6443..6660 CDD:238103
SPEC 6663..6878 CDD:238103
SPEC 6880..7087 CDD:238103
SPEC 6986..7196 CDD:238103
SPEC 7196..7417 CDD:238103
SPEC 7314..7526 CDD:238103
SPEC 7528..7747 CDD:238103
SPEC 7749..7968 CDD:238103 3/12 (25%)
SPEC 7973..8181 CDD:238103 43/239 (18%)
FRQ1 <8375..8444 CDD:444056 16/78 (21%)
GAS2 8450..8522 CDD:128539 38/71 (54%)
PHA03307 8550..>8795 CDD:223039 37/144 (26%)
D2096.11NP_001379846.1 CH_SF <117..180 CDD:469584 13/91 (14%)
CH_SF <315..368 CDD:469584 7/52 (13%)
GAS2 507..579 CDD:128539 38/71 (54%)
Blue background indicates that the domain is not in the aligned region.

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