DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG16935 and RTN4IP1

DIOPT Version :10

Sequence 1:NP_610914.2 Gene:CG16935 / 36540 FlyBaseID:FBgn0033883 Length:357 Species:Drosophila melanogaster
Sequence 2:NP_116119.2 Gene:RTN4IP1 / 84816 HGNCID:18647 Length:396 Species:Homo sapiens


Alignment Length:378 Identity:87/378 - (23%)
Similarity:144/378 - (38%) Gaps:100/378 - (26%)


- Green bases have known domain annotations that are detailed below.


  Fly    20 SVVAKSLKYTQHGEPQEVLQLVEDKL------PDPKDNQVLVKILAAPINPADINTIQG------ 72
            |.|..:....::|: .|||:..::.:      |    |:|:||:.||.:||.|:|...|      
Human    40 STVMPAWVIDKYGK-NEVLRFTQNMMMPIIHYP----NEVIVKVHAASVNPIDVNMRSGYGATAL 99

  Fly    73 ---KYPVKPK-----FPAVGGNECVAEVICVGDKVKGFEAGQHVIPLASGLGTWTTHAVYKE--- 126
               :.|:..|     ||...|.:....|:..|..||.|:.|..|         |.....:|:   
Human   100 NMKRDPLHVKIKGEEFPLTLGRDVSGVVMECGLDVKYFKPGDEV---------WAAVPPWKQGTL 155

  Fly   127 DQLLIVS--------KKVGLAEAATSTVNPTTAYRMLKDFVQL----CPGDTVIQNGANSAVGQA 179
            .:.::||        |.:...:||:......||:..:.....|    |.|..|:..||:..||..
Human   156 SEFVVVSGNEVSHKPKSLTHTQAASLPYVALTAWSAINKVGGLNDKNCTGKRVLILGASGGVGTF 220

  Fly   180 VHQLCRAWGINSVGIVRDRPEIAELKQMLQCLGATEVLTEAEIRTSDIFKSGKLK------KP-R 237
            ..|:.:||..:...:...     :..::::.|||.:|:.         :|||.::      || .
Human   221 AIQVMKAWDAHVTAVCSQ-----DASELVRKLGADDVID---------YKSGSVEEQLKSLKPFD 271

  Fly   238 LAFNCVGGKSATEVSRHLD--NGGVLVTY--------------GGMSREPVTVATGPLIFKDIAF 286
            ...:.|||.:.|.....|.  :|...||.              .||.:..|||.:.       |.
Human   272 FILDNVGGSTETWAPDFLKKWSGATYVTLVTPFLLNMDRLGIADGMLQTGVTVGSK-------AL 329

  Fly   287 RGFWM---TRWSKENYSSPERSKMFKEIFELMEQGKFVAPNHEMVPLAKFKDA 336
            :.||.   .||:....|.|    ...:|.||::.||......:..|.:|..:|
Human   330 KHFWKGVHYRWAFFMASGP----CLDDIAELVDAGKIRPVIEQTFPFSKVPEA 378

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG16935NP_610914.2 ETR 23..355 CDD:176250 85/375 (23%)
RTN4IP1NP_116119.2 RTN4I1 43..394 CDD:176210 85/375 (23%)

Return to query results.
Submit another query.