DRSC/TRiP Functional Genomics Resources

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Protein Alignment Uba3 and UBA4

DIOPT Version :9

Sequence 1:NP_610913.1 Gene:Uba3 / 36539 FlyBaseID:FBgn0263697 Length:450 Species:Drosophila melanogaster
Sequence 2:NP_011979.1 Gene:UBA4 / 856511 SGDID:S000001153 Length:440 Species:Saccharomyces cerevisiae


Alignment Length:455 Identity:94/455 - (20%)
Similarity:151/455 - (33%) Gaps:163/455 - (35%)


- Green bases have known domain annotations that are detailed below.


  Fly    10 LILQSKRFNGLRNILEREGPFCKDGFAASSENLEFLQTKCQVLIIGAGGLGCELLKDLALMGFGN 74
            |.|:..:..|.:.|:|..|     |.|.   .::...||  ||::|||||||..|..||..|.|.
Yeast    39 LSLEEYQRYGRQMIVEETG-----GVAG---QVKLKNTK--VLVVGAGGLGCPALPYLAGAGVGQ 93

  Fly    75 LHVIDMDTIELSNLNRQFLFRRTDIGASKAECAARFINARVPTCRVTPHFKKI---------QDF 130
            :.::|.|.:|.|||:||.|...:.:|..|.|.|.::|.      ::.||...:         ..|
Yeast    94 IGIVDNDVVETSNLHRQVLHDSSRVGMLKCESARQYIT------KLNPHINVVTYPVRLNSSNAF 152

  Fly   131 DESFYQQFHLVVCGLDSIVARRWINGMLLSMLRYEEDGTIDTSSIVPMIDG-GTEGFKGNARVIL 194
            |  .::.::.::...||.:.|..::           |..::....|....| ||||     ::.:
Yeast   153 D--IFKGYNYILDCTDSPLTRYLVS-----------DVAVNLGITVVSASGLGTEG-----QLTI 199

  Fly   195 PGFT---ACIECTLDLFPPQVNYPLCTIANTPRLPEHCIEYVKIIQWEKQNPFGVPLDGDDPQHI 256
            ..|.   .|..|.         ||      ||..|                              
Yeast   200 LNFNNIGPCYRCF---------YP------TPPPP------------------------------ 219

  Fly   257 GWIYERALERSNEFNITGVTYRLVQGVVKHIIPAVASTNAAIAAACALEVFKLATSCYDSMANYL 321
                 .|:....|..:.|              |.:    ..:....|:|..||....|.:.    
Yeast   220 -----NAVTSCQEGGVIG--------------PCI----GLVGTMMAVETLKLILGIYTNE---- 257

  Fly   322 NFNDLDGIYT-------YTYEAE-KSENCLACSNTPQPLPIEDPNTTTLEDVI-------KLLCD 371
            ||:....:|:       .|::.. :.|.||.|..          |.|..::.|       :|.|.
Yeast   258 NFSPFLMLYSGFPQQSLRTFKMRGRQEKCLCCGK----------NRTITKEAIEKGEINYELFCG 312

  Fly   372 SPRFQLKSP-------ALTTVMKDGK---------RRTLYMSGVKSIEEATR---KNLTQSLGEL 417
            :..:.:..|       |...:.||.:         .|..:...:....||..   |||....|:|
Yeast   313 ARNYNVCEPDERISVDAFQRIYKDDEFLAKHIFLDVRPSHHYEISHFPEAVNIPIKNLRDMNGDL 377

  Fly   418  417
            Yeast   378  377

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Uba3NP_610913.1 ThiF 48..>220 CDD:279270 48/184 (26%)
Uba3_RUB 50..346 CDD:238765 66/316 (21%)
E2_bind 357..442 CDD:285976 17/87 (20%)
UBA4NP_011979.1 ThiF_MoeB_HesA_family 46..279 CDD:238386 71/338 (21%)
RHOD_ThiF 316..440 CDD:238784 12/62 (19%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG0476
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
21.810

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