DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Uba3 and UBA1

DIOPT Version :9

Sequence 1:NP_610913.1 Gene:Uba3 / 36539 FlyBaseID:FBgn0263697 Length:450 Species:Drosophila melanogaster
Sequence 2:NP_012712.1 Gene:UBA1 / 853670 SGDID:S000001693 Length:1024 Species:Saccharomyces cerevisiae


Alignment Length:422 Identity:104/422 - (24%)
Similarity:184/422 - (43%) Gaps:100/422 - (23%)


- Green bases have known domain annotations that are detailed below.


  Fly    50 QVLIIGAGGLGCELLKDLALMGFGN-----LHVIDMDTIELSNLNRQFLFRRTDIGASKAECAAR 109
            :|.::|:|.:|||:||:.||:|.|:     :.|.|.|:||.||||||||||..|:|.:|:|.||.
Yeast   436 KVFLVGSGAIGCEMLKNWALLGLGSGSDGYIVVTDNDSIEKSNLNRQFLFRPKDVGKNKSEVAAE 500

  Fly   110 F-----------INARVPTCRVTPHFKKIQDFDESFYQQFHLVVCGLDSIVARRWINGMLLSMLR 163
            .           |||::.  :|.|..::|  |::||::....|...||::.||.:::...:...:
Yeast   501 AVCAMNPDLKGKINAKID--KVGPETEEI--FNDSFWESLDFVTNALDNVDARTYVDRRCVFYRK 561

  Fly   164 YEEDGTIDTSSIVPMIDGGTEGFKGNARVILPGFTACIECTLDLFPPQVNYPLCTIANTPRLPEH 228
                         |:::.||.|.|||.:||:|..|.....:.|  ||:.:.||||:.:.|...:|
Yeast   562 -------------PLLESGTLGTKGNTQVIIPRLTESYSSSRD--PPEKSIPLCTLRSFPNKIDH 611

  Fly   229 CIEYVKIIQWEKQNPFGVPLDGDDPQHIGW------IYERALERSNEFNITGVTYRLVQGVVKHI 287
            .|.:.|.:   .|..|     .|..:::..      ..|:.|::|.:          |:||::.|
Yeast   612 TIAWAKSL---FQGYF-----TDSAENVNMYLTQPNFVEQTLKQSGD----------VKGVLESI 658

  Fly   288 IPAVASTNAAIAAACALEVFKLATSCYDSMANYLNFNDLDGIYTYTYEAEKSEN---CLACSNTP 349
            ..:::|......     :..|.|...::...|: :...|  ::.:..:|:.|..   .......|
Yeast   659 SDSLSSKPHNFE-----DCIKWARLEFEKKFNH-DIKQL--LFNFPKDAKTSNGEPFWSGAKRAP 715

  Fly   350 QPLPIEDPNTTTLEDVIKLLCDSPRFQLKSPALTTVMKDGKRRTLYMSGVKSIEEATRKNLTQSL 414
            .||..:..|......|:.                     |.....|..|:||.:..::.|:.:..
Yeast   716 TPLEFDIYNNDHFHFVVA---------------------GASLRAYNYGIKSDDSNSKPNVDEYK 759

  Fly   415 GELGLHDGQQLTVTDATSPSAMTLQLKYQSNE 446
            ..:     ..:.:.:.| |:|   .||.|.|:
Yeast   760 SVI-----DHMIIPEFT-PNA---NLKIQVND 782

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Uba3NP_610913.1 ThiF 48..>220 CDD:279270 65/185 (35%)
Uba3_RUB 50..346 CDD:238765 86/320 (27%)
E2_bind 357..442 CDD:285976 12/84 (14%)
UBA1NP_012712.1 Ube1 13..1023 CDD:273603 104/422 (25%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG0476
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
21.810

Return to query results.
Submit another query.